Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
      1ygg
      1yhq
      1yi2
      1yij
      1yik
      1yil
      1yit
      1yj9
      1yjn
      1yjw
      1yku
      1ykx
      1yky
      1ykz
      1yl0
      1yl1
      1ynp
      1ynq
      1ype
      1ypl
      1yq2
      1yvm
      1yx1
      1yy6
      1yya
      1yyg
      1z1q
      1z2u
      1z3z
      1z45
      1z55
      1z67
      1z8i
      1z8j
      1za2
      1zbg
      1zc9
      1zdn
      1zel
      1zew
      1zey
      1zf4
      1zf6
      1zf7
      1zf9
      1zfa
      1zh8
      1zjm
      1zjn
      1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 19 (901-950), PDB files 1ygg - 1zko






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 901-950 (1ygg - 1zko):
  1. 1ygg - Crystal Structure of Phosphoenolpyruvate Carboxykinase From Actinobacillus Succinogenes
  2. 1yhq - Crystal Structure Of Azithromycin Bound to the G2099A Mutant 50S Ribosomal Subunit of Haloarcula Marismortui
  3. 1yi2 - Crystal Structure Of Erythromycin Bound to the G2099A Mutant 50S Ribosomal Subunit of Haloarcula Marismortui
  4. 1yij - Crystal Structure Of Telithromycin Bound to the G2099A Mutant 50S Ribosomal Subunit of Haloarcula Marismortui
  5. 1yik - Structure of Hen Egg White Lysozyme Soaked With Cu-Cyclam
  6. 1yil - Structure of Hen Egg White Lysozyme Soaked With CU2- Xylylbicyclam
  7. 1yit - Crystal Structure Of Virginiamycin M and S Bound to the 50S Ribosomal Subunit of Haloarcula Marismortui
  8. 1yj9 - Crystal Structure Of the Mutant 50S Ribosomal Subunit of Haloarcula Marismortui Containing A Three Residue Deletion in L22
  9. 1yjn - Crystal Structure Of Clindamycin Bound to the G2099A Mutant 50S Ribosomal Subunit of Haloarcula Marismortui
  10. 1yjw - Crystal Structure Of Quinupristin Bound to the G2099A Mutant 50S Ribosomal Subunit of Haloarcula Marismortui
  11. 1yku - Crystal Structure of A Sensor Domain Homolog
  12. 1ykx - Effect of Alcohols on Protein Hydration
  13. 1yky - Effect of Alcohols on Protein Hydration
  14. 1ykz - Effect of Alcohols on Protein Hydration
  15. 1yl0 - Effect of Alcohols on Protein Hydration
  16. 1yl1 - Effect of Alcohols on Protein Hydration
  17. 1ynp - Aldo-Keto Reductase AKR11C1 From Bacillus Halodurans (Apo Form)
  18. 1ynq - Aldo-Keto Reductase AKR11C1 From Bacillus Halodurans (Holo Form)
  19. 1ype - Thrombin Inhibitor Complex
  20. 1ypl - X-Ray Crystal Structure of Thrombin Inhibited By Synthetic Cyanopeptide Analogue Ra-1008
  21. 1yq2 - Beta-Galactosidase From Arthrobacter Sp. C2-2 (Isoenzyme C2- 2-1)
  22. 1yvm - E. Coli Methionine Aminopeptidase in Complex With Thiabendazole
  23. 1yx1 - Crystal Structure Of Protein of Unknown Function PA2260 From Pseudomonas Aeruginosa, Possible Sugar Phosphate Isomerase
  24. 1yy6 - The Crystal Strucure Of the N-Terminal Domain of Hausp/USP7 Complexed With An EBNA1 Peptide
  25. 1yya - Crystal Structure of TT0473, Putative Triosephosphate Isomerase From Thermus Thermophilus HB8
  26. 1yyg - Manganese Peroxidase Complexed With Cd(II) Inhibitor
  27. 1z1q - Y66L Variant of Enhanced Green Fluorescent Protein With 374- Nm Absorbing Chromophore
  28. 1z2u - The 1.1A Crystallographic Structure of Ubiquitin- Conjugating Enzyme (Ubc-2) From Caenorhabditis Elegans: Functional and Evolutionary Significance
  29. 1z3z - The Crystal Structure of A Dgd Mutant: Q52A
  30. 1z45 - Crystal Structure of the GAL10 Fusion Protein Galactose Mutarotase/Udp-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, and Galactose
  31. 1z55 - Effect of Alcohols on Protein Hydration
  32. 1z67 - Structure Of Homeodomain-Like Protein of Unknown Function S4005 From Shigella Flexneri
  33. 1z8i - Crystal Structure of the Thrombin Mutant G193A Bound to Ppack
  34. 1z8j - Crystal Structure of the Thrombin Mutant G193P Bound to Ppack
  35. 1za2 - Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase in the Presence of Ctp, Carbamoyl Phosphate At 2.50 A Resolution
  36. 1zbg - Crystal Structure Of A Complex of Mutant Hiv-1 Protease (A71V, V82T, I84V) With A Hydroxyethylamine Peptidomimetic Inhibitor Boc-Phe- Psi[R-Ch(Oh)CH2NH]-Phe-Glu-Phe-NH2
  37. 1zc9 - The Crystal Structure of Dialkylglycine Decarboxylase Complex With Pyridoxamine 5-Phosphate
  38. 1zdn - Ubiquitin-Conjugating Enzyme E2S
  39. 1zel - Crystal Structure of RV2827C Protein From Mycobacterium Tuberculosis
  40. 1zew - B-Dna
  41. 1zey - Cgg A-Dna
  42. 1zf4 - Atc Four-Stranded Dna Holliday Junction
  43. 1zf6 - Tgg Duplex A-Dna
  44. 1zf7 - Gac Duplex B-Dna
  45. 1zf9 - Ggg Duplex A-Dna
  46. 1zfa - Gga Duplex A-Dna
  47. 1zh8 - Crystal Structure of Oxidoreductase (TM0312) From Thermotoga Maritima At 2.50 A Resolution
  48. 1zjm - Human Dna Polymerase Beta Complexed With Dna Containing An A-A Mismatched Primer Terminus
  49. 1zjn - Human Dna Polymerase Beta Complexed With Dna Containing An A-A Mismatched Primer Terminus With Dgtp
  50. 1zko - Crystal Structure of Glycine Cleavage System H Protein (TM0212) From Thermotoga Maritima At 1.65 A Resolution


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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