Sodium in PDB 8w9n: Structure of ATHKT1;1 in Nacl at 2.7 Angstroms Resolution
Sodium Binding Sites:
The binding sites of Sodium atom in the Structure of ATHKT1;1 in Nacl at 2.7 Angstroms Resolution
(pdb code 8w9n). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the
Structure of ATHKT1;1 in Nacl at 2.7 Angstroms Resolution, PDB code: 8w9n:
Jump to Sodium binding site number:
1;
2;
Sodium binding site 1 out
of 2 in 8w9n
Go back to
Sodium Binding Sites List in 8w9n
Sodium binding site 1 out
of 2 in the Structure of ATHKT1;1 in Nacl at 2.7 Angstroms Resolution
Mono view
Stereo pair view
|
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Structure of ATHKT1;1 in Nacl at 2.7 Angstroms Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Na701
b:37.5
occ:1.00
|
O
|
A:ASN211
|
2.8
|
28.3
|
1.0
|
O
|
A:ASN440
|
2.9
|
31.3
|
1.0
|
O
|
A:HIS335
|
3.1
|
52.0
|
1.0
|
O
|
A:VAL66
|
3.2
|
39.7
|
1.0
|
CB
|
A:ASN440
|
3.3
|
21.5
|
1.0
|
C
|
A:ASN440
|
3.7
|
28.0
|
1.0
|
CB
|
A:ASN211
|
3.7
|
17.2
|
1.0
|
C
|
A:ASN211
|
3.7
|
28.7
|
1.0
|
O
|
A:GLY439
|
4.0
|
30.8
|
1.0
|
CB
|
A:HIS335
|
4.0
|
24.8
|
1.0
|
C
|
A:HIS335
|
4.1
|
25.1
|
1.0
|
CA
|
A:ASN440
|
4.1
|
21.2
|
1.0
|
CG2
|
A:VAL66
|
4.1
|
25.2
|
1.0
|
CA
|
A:ASN211
|
4.4
|
24.4
|
1.0
|
O
|
A:ALA210
|
4.4
|
28.8
|
1.0
|
C
|
A:VAL66
|
4.4
|
32.0
|
1.0
|
CG
|
A:ASN440
|
4.4
|
28.4
|
1.0
|
CA
|
A:HIS335
|
4.5
|
31.1
|
1.0
|
CB
|
A:VAL66
|
4.6
|
29.2
|
1.0
|
OD1
|
A:ASN440
|
4.7
|
36.4
|
1.0
|
N
|
A:CYS212
|
4.7
|
27.7
|
1.0
|
N
|
A:VAL441
|
4.8
|
26.5
|
1.0
|
C
|
A:GLY439
|
4.9
|
22.2
|
1.0
|
CG
|
A:ASN211
|
4.9
|
25.4
|
1.0
|
CA
|
A:CYS212
|
5.0
|
24.4
|
1.0
|
N
|
A:ASN440
|
5.0
|
26.9
|
1.0
|
ND2
|
A:ASN211
|
5.0
|
33.5
|
1.0
|
|
Sodium binding site 2 out
of 2 in 8w9n
Go back to
Sodium Binding Sites List in 8w9n
Sodium binding site 2 out
of 2 in the Structure of ATHKT1;1 in Nacl at 2.7 Angstroms Resolution
Mono view
Stereo pair view
|
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Structure of ATHKT1;1 in Nacl at 2.7 Angstroms Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Na701
b:38.0
occ:1.00
|
O
|
B:ASN440
|
2.8
|
34.1
|
1.0
|
O
|
B:ASN211
|
2.9
|
28.3
|
1.0
|
O
|
B:HIS335
|
3.0
|
50.3
|
1.0
|
CB
|
B:ASN440
|
3.2
|
24.2
|
1.0
|
O
|
B:VAL66
|
3.2
|
39.9
|
1.0
|
C
|
B:ASN440
|
3.6
|
29.7
|
1.0
|
CB
|
B:ASN211
|
3.8
|
19.4
|
1.0
|
C
|
B:ASN211
|
3.8
|
30.6
|
1.0
|
O
|
B:GLY439
|
3.9
|
33.0
|
1.0
|
CB
|
B:HIS335
|
4.0
|
24.0
|
1.0
|
C
|
B:HIS335
|
4.0
|
28.9
|
1.0
|
CA
|
B:ASN440
|
4.0
|
20.0
|
1.0
|
CG2
|
B:VAL66
|
4.3
|
25.6
|
1.0
|
CG
|
B:ASN440
|
4.4
|
29.5
|
1.0
|
CA
|
B:HIS335
|
4.4
|
32.1
|
1.0
|
CA
|
B:ASN211
|
4.5
|
24.4
|
1.0
|
O
|
B:ALA210
|
4.5
|
34.0
|
1.0
|
C
|
B:VAL66
|
4.5
|
30.8
|
1.0
|
OD1
|
B:ASN440
|
4.6
|
33.3
|
1.0
|
N
|
B:VAL441
|
4.7
|
26.5
|
1.0
|
CB
|
B:VAL66
|
4.7
|
28.2
|
1.0
|
C
|
B:GLY439
|
4.8
|
25.2
|
1.0
|
N
|
B:CYS212
|
4.8
|
29.2
|
1.0
|
CG
|
B:ASN211
|
4.9
|
28.4
|
1.0
|
N
|
B:ASN440
|
4.9
|
26.2
|
1.0
|
OD1
|
B:ASN211
|
5.0
|
40.3
|
1.0
|
|
Reference:
J.Q.Wang,
J.Q.Wang.
N/A N/A.
Page generated: Wed Oct 9 14:15:08 2024
|