Sodium in PDB 8w6h: NAS1 with Sulfate - in/in State

The binding sites of Sodium atom in the NAS1 with Sulfate - in/in State (pdb code 8w6h). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the NAS1 with Sulfate - in/in State, PDB code: 8w6h:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the NAS1 with Sulfate - in/in State


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of NAS1 with Sulfate - in/in State within 5.0Å range: probe atom residue distance (Å) B Occ A:Na602 b:21.7 occ:1.00 O A:GLY258 2.5 23.2 1.0 OD1 A:ASN140 2.5 23.7 1.0 O A:LEU138 2.5 21.8 1.0 O A:SER135 2.5 19.4 1.0 C A:GLY258 3.1 23.2 1.0 N A:ASN140 3.4 23.7 1.0 CG A:ASN140 3.5 23.7 1.0 C A:SER135 3.5 19.4 1.0 C A:LEU138 3.6 21.8 1.0 C A:SER139 3.6 23.6 1.0 CA A:GLY258 3.7 23.2 1.0 CA A:SER139 3.7 23.6 1.0 CA A:SER135 3.8 19.4 1.0 CB A:SER135 3.9 19.4 1.0 CA A:GLY252 3.9 20.9 1.0 N A:THR259 4.0 24.2 1.0 CA A:ASN140 4.1 23.7 1.0 N A:SER139 4.1 23.6 1.0 ND2 A:ASN140 4.3 23.7 1.0 OG A:SER135 4.3 19.4 1.0 CA A:THR259 4.3 24.2 1.0 O A:SER139 4.3 23.6 1.0 CB A:ASN140 4.3 23.7 1.0 O A:GLY252 4.4 20.9 1.0 O2 A:SO4601 4.6 36.0 1.0 C A:GLY252 4.7 20.9 1.0 N A:MET136 4.7 21.4 1.0 N A:LEU138 4.8 21.8 1.0 CA A:LEU138 4.8 21.8 1.0 CB A:THR259 4.8 24.2 1.0 O A:SER248 4.9 21.2 1.0 N A:GLY252 4.9 20.9 1.0

Sodium binding site 2 out of 2 in the NAS1 with Sulfate - in/in State


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of NAS1 with Sulfate - in/in State within 5.0Å range: probe atom residue distance (Å) B Occ B:Na602 b:21.2 occ:1.00 O B:GLY258 2.5 22.6 1.0 OD1 B:ASN140 2.5 23.4 1.0 O B:LEU138 2.5 21.5 1.0 O B:SER135 2.5 19.2 1.0 C B:GLY258 3.1 22.6 1.0 N B:ASN140 3.4 23.4 1.0 CG B:ASN140 3.5 23.4 1.0 C B:SER135 3.5 19.2 1.0 C B:LEU138 3.6 21.5 1.0 C B:SER139 3.6 23.4 1.0 CA B:GLY258 3.7 22.6 1.0 CA B:SER139 3.7 23.4 1.0 CA B:SER135 3.8 19.2 1.0 CB B:SER135 3.9 19.2 1.0 CA B:GLY252 3.9 20.6 1.0 N B:THR259 4.0 23.5 1.0 CA B:ASN140 4.1 23.4 1.0 N B:SER139 4.1 23.4 1.0 ND2 B:ASN140 4.3 23.4 1.0 OG B:SER135 4.3 19.2 1.0 CA B:THR259 4.3 23.5 1.0 O B:SER139 4.3 23.4 1.0 CB B:ASN140 4.3 23.4 1.0 O B:GLY252 4.4 20.6 1.0 O2 B:SO4601 4.6 35.1 1.0 C B:GLY252 4.7 20.6 1.0 N B:MET136 4.7 21.2 1.0 N B:LEU138 4.8 21.5 1.0 CA B:LEU138 4.8 21.5 1.0 CB B:THR259 4.8 23.5 1.0 O B:SER248 4.9 20.9 1.0 N B:GLY252 4.9 20.6 1.0

X.Chi, Y.Chen, Y.Li, L.Dai, Y.Zhang, Y.Shen, Y.Chen, T.Shi, H.Yang, Z.Wang, R.Yan. Cryo-Em Structures of the Human NAS1 and NADC1 Transporters Revealed the Elevator Transport and Allosteric Regulation Mechanism. Sci Adv V. 10 L3685 2024.
ISSN: ESSN 2375-2548
PubMed: 38552027
DOI: 10.1126/SCIADV.ADL3685