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Sodium in PDB 8q1s: Pathogenic Mutations of Human Phosphorylation Sites Affect Protein- Protein Interactions

Protein crystallography data

The structure of Pathogenic Mutations of Human Phosphorylation Sites Affect Protein- Protein Interactions, PDB code: 8q1s was solved by Y.Roske, O.Daumke, T.Rrustemi, M.Selbach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.70 / 3.23
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 123.78, 123.78, 250.2, 90, 90, 120
R / Rfree (%) 23 / 27.9

Other elements in 8q1s:

The structure of Pathogenic Mutations of Human Phosphorylation Sites Affect Protein- Protein Interactions also contains other interesting chemical elements:

Bromine (Br) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Pathogenic Mutations of Human Phosphorylation Sites Affect Protein- Protein Interactions (pdb code 8q1s). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Pathogenic Mutations of Human Phosphorylation Sites Affect Protein- Protein Interactions, PDB code: 8q1s:

Sodium binding site 1 out of 1 in 8q1s

Go back to Sodium Binding Sites List in 8q1s
Sodium binding site 1 out of 1 in the Pathogenic Mutations of Human Phosphorylation Sites Affect Protein- Protein Interactions


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Pathogenic Mutations of Human Phosphorylation Sites Affect Protein- Protein Interactions within 5.0Å range:
probe atom residue distance (Å) B Occ
P:Na201

b:86.9
occ:1.00
O P:LYS96 2.8 177.3 1.0
C P:LYS96 4.1 171.2 1.0
CD2 A:LEU230 4.1 125.8 1.0
CA P:TYR97 4.5 157.2 1.0
CD1 P:TYR97 4.5 152.2 1.0
NZ P:LYS98 4.5 146.0 1.0
N P:TYR97 4.7 165.4 1.0
CE1 P:TYR97 4.9 151.4 1.0

Reference:

Y.Roske, O.Daumke, T.Rrustemi, M.Selbach, K.Meyer, B.Uyar, A.Akalin, K.Imami, Y.Ishihama. Pathogenic Mutations of Human Phosphorylation Sites Affect Protein-Protein Interactions To Be Published.
Page generated: Wed Oct 9 13:06:00 2024

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