Sodium in PDB 8fty: Crystal Structure of the Carotenoid Isomerooxygenase, Ninab

The structure of Crystal Structure of the Carotenoid Isomerooxygenase, Ninab, PDB code: 8fty was solved by P.D.Kiser, Y.J.Solano, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.67 / 1.95
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	349.934, 52.036, 210.036, 90, 98.95, 90
R / Rfree (%)	21.7 / 24.7

The structure of Crystal Structure of the Carotenoid Isomerooxygenase, Ninab also contains other interesting chemical elements:

Chlorine	(Cl)	3 atoms
Arsenic	(As)	1 atom
Iron	(Fe)	8 atoms

The binding sites of Sodium atom in the Crystal Structure of the Carotenoid Isomerooxygenase, Ninab (pdb code 8fty). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the Carotenoid Isomerooxygenase, Ninab, PDB code: 8fty:

Sodium binding site 1 out of 1 in the Crystal Structure of the Carotenoid Isomerooxygenase, Ninab


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Carotenoid Isomerooxygenase, Ninab within 5.0Å range: probe atom residue distance (Å) B Occ D:Na605 b:47.2 occ:0.50 O D:HOH2275 2.6 33.2 1.0 OE2 D:GLU483 3.0 31.0 1.0 O D:THR431 3.6 27.5 1.0 O D:THR481 3.6 31.8 1.0 CD D:GLU483 4.1 29.7 1.0 O D:HOH2272 4.1 33.4 0.5 O D:MET482 4.4 27.5 0.5 O D:MET482 4.4 28.2 0.5 CB D:MET482 4.7 30.1 0.5 O D:HOH2195 4.7 27.3 1.0 C D:THR431 4.7 27.1 1.0 CG D:GLU483 4.8 29.7 1.0 CB D:MET482 4.8 27.3 0.5 C D:MET482 4.8 27.5 0.5 C D:MET482 4.8 28.3 0.5 N D:THR431 4.8 27.2 1.0 C D:THR481 4.9 30.2 1.0 OE1 D:GLU483 4.9 28.5 1.0

Y.J.Solano, P.D.Kiser. Structure of the Carotenoid Isomerooxygenase To Be Published.