Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
      1xcu
      1xdf
      1xel
      1xff
      1xfg
      1xj4
      1xj6
      1xk8
      1xkn
      1xlt
      1xmn
      1xn1
      1xnz
      1xp7
      1xpe
      1xpf
      1xsl
      1xsn
      1xsp
      1xss
      1xui
      1xxf
      1y0b
      1y0p
      1y1k
      1y33
      1y34
      1y38
      1y3b
      1y3c
      1y3d
      1y3f
      1y3o
      1y48
      1y4a
      1y4d
      1y5y
      1y63
      1y6t
      1y7w
      1y9d
      1y9z
      1yam
      1yan
      1yao
      1yap
      1yaq
      1yce
      1ye8
      1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 18 (851-900), PDB files 1xcu - 1yf1






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 851-900 (1xcu - 1yf1):
  1. 1xcu - Oligonucleotid/Drug Complex
  2. 1xdf - Crystal Structure of Pathogenesis-Related Protein Llpr-10.2A From Yellow Lupine
  3. 1xel - Udp-Galactose 4-Epimerase From Escherichia Coli
  4. 1xff - Glutaminase Domain of Glucosamine 6-Phosphate Synthase Complexed With Glutamate
  5. 1xfg - Glutaminase Domain of Glucosamine 6-Phosphate Synthase Complexed With L-Glu Hydroxamate
  6. 1xj4 - Co-Bound Structure of Bjfixlh
  7. 1xj6 - Structure of Bjfixlh in the Unliganded Ferrous Form
  8. 1xk8 - Divalent Cation Tolerant Protein Cuta From Homo Sapiens O60888
  9. 1xkn - Crystal Structure of the Putative Peptidyl-Arginine Deiminase From Chlorobium Tepidum, Nesg Target CTR21
  10. 1xlt - Crystal Structure of Transhydrogenase [(Domain I)2:Domain III] Heterotrimer Complex
  11. 1xmn - Crystal Structure of Thrombin Bound to Heparin
  12. 1xn1 - Crystal Structure of Lumazine Synthase From Brucella Abortus (Orthorhombic Form At 3.05 Angstroms)
  13. 1xnz - Crystal Structure Of Mn(II) Form of E. Coli. Methionine Aminopeptidase in Complex With 5-(2-Chlorophenyl)Furan-2- Carboxylic Acid
  14. 1xp7 - Hiv-1 Subtype F Genomic Rna Dimerization Initiation Site
  15. 1xpe - Hiv-1 Subtype B Genomic Rna Dimerization Initiation Site
  16. 1xpf - Hiv-1 Subtype A Genomic Rna Dimerization Initiation Site
  17. 1xsl - Crystal Structure of Human Dna Polymerase Lambda in Complex With A One Nucleotide Dna Gap
  18. 1xsn - Crystal Structure of Human Dna Polymerase Lambda in Complex With A One Nucleotide Dna Gap and Ddttp
  19. 1xsp - Crystal Structure of Human Dna Polymerase Lambda in Complex With Nicked Dna and Pyrophosphate
  20. 1xss - Semi-Rational Engineering of A Green-Emitting Coral Fluorescent Protein Into An Efficient Highlighter.
  21. 1xui - Trypsin-Keto-Babim, Zn+2-Free, pH 8.2
  22. 1xxf - Crystal Structure of the Fxia Catalytic Domain in Complex With Ecotin Mutant (Ecotinp)
  23. 1y0b - Crystal Structure of Xanthine Phosphoribosyltransferase From Bacillus Subtilis.
  24. 1y0p - Flavocytochrome C3 With Mesaconate Bound
  25. 1y1k - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 T58A Mutant
  26. 1y33 - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 T58P Mutant
  27. 1y34 - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 E60A Mutant
  28. 1y38 - Crystal Structure of the Complex Formed Between Phospholipase A2 Dimer and Glycerophosphate At 2.4 A Resolution
  29. 1y3b - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 E60S Mutant
  30. 1y3c - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 R62A Mutant
  31. 1y3d - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 R67A Mutant
  32. 1y3f - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 F69A Mutant
  33. 1y3o - Hiv-1 Dis Rna Subtype F- Mn Soaked
  34. 1y48 - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 R65A Mutant
  35. 1y4a - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59R/E60S Mutant
  36. 1y4d - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59R/E60S Mutant
  37. 1y5y - Structure of the Tetrahydromethanopterin Dependent Formaldehyde- Activating Enzyme (Fae) From Methylobacterium Extorquens AM1
  38. 1y63 - Initial Crystal Structural Analysis of A Probable Kinase From Leishmania Major Friedlin
  39. 1y6t - Hiv-1 Dis(Mal) Duplex Co Hexamine-Soaked
  40. 1y7w - Crystal Structure of A Halotolerant Carbonic Anhydrase From Dunaliella Salina
  41. 1y9d - Pyruvate Oxidase Variant V265A From Lactobacillus Plantarum
  42. 1y9z - Crystal Structure of Psychrophilic Subtilisin-Like Serine Protease From Antarctic Psychrotroph Pseudoalteromonas Sp. As-11 At 0.14 Nm Resolution
  43. 1yam - Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies and X-Ray Structural Analysis of the Five Isoleucine to Valine Mutants
  44. 1yan - Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies and X-Ray Structural Analysis of the Five Isoleucine to Valine Mutants
  45. 1yao - Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies and X-Ray Structural Analysis of the Five Isoleucine to Valine Mutants
  46. 1yap - Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies and X-Ray Structural Analysis of the Five Isoleucine to Valine Mutants
  47. 1yaq - Contribution Of Hydrophobic Residues To The Stability Of Human Lysozyme: Calorimetric Studies and X-Ray Structural Analysis of the Five Isoleucine to Valine Mutants
  48. 1yce - Structure Of the Rotor Ring of F-Type Na+-Atpase From Ilyobacter Tartaricus
  49. 1ye8 - Crystal Structure of THEP1 From the Hyperthermophile Aquifex Aeolicus
  50. 1yf1 - Structural And Biochemical Analysis of the Link Between Enzymatic Activity and Oligomerization in Ahpc, A Bacterial Peroxiredoxin.


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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