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Sodium in PDB 7ztl: Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex

Enzymatic activity of Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex

All present enzymatic activity of Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex, PDB code: 7ztl was solved by M.Diebold, H.Schindelin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.17 / 1.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 86.614, 86.614, 91.789, 90, 90, 120
R / Rfree (%) 16.3 / 19.3

Other elements in 7ztl:

The structure of Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex (pdb code 7ztl). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex, PDB code: 7ztl:

Sodium binding site 1 out of 1 in 7ztl

Go back to Sodium Binding Sites List in 7ztl
Sodium binding site 1 out of 1 in the Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Covalently Linked Aurora-A N-Myc Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na508

b:55.0
occ:1.00
O A:HOH618 2.2 49.4 1.0
O A:HOH779 2.2 55.0 1.0
O A:HOH623 2.2 43.2 1.0
O A:HOH786 2.2 55.3 1.0
O A:HOH702 2.3 54.4 1.0
O A:HOH785 2.3 60.7 1.0
OE2 A:GLU330 3.9 56.8 1.0
O A:HOH772 3.9 55.9 1.0
OE2 A:GLU321 4.2 38.9 1.0
O A:HOH705 4.2 51.7 1.0
O A:HOH661 4.2 39.8 1.0
O A:HOH768 4.2 44.9 1.0
O A:GLY325 4.3 38.6 1.0
CD A:PRO327 4.5 36.7 1.0
O A:HOH781 4.6 50.5 1.0
CD A:GLU330 4.8 49.6 1.0
O A:HOH717 4.9 37.4 1.0
OE1 A:GLU330 4.9 53.2 1.0
CA A:LYS326 5.0 37.8 1.0

Reference:

M.Diebold, L.Schonemann, M.Eilers, C.Sotriffer, H.Schindelin. Crystal Structure of A Covalently Linked Aurora-A-Mycn Complex Acta Crystallogr.,Sect.D V. 79 1 2023.
ISSN: ESSN 1399-0047
Page generated: Wed Oct 9 10:20:00 2024

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