Sodium in PDB 7tpm: Structure of the Outer-Membrane Lipoprotein Carrier Protein (Lola) From Borrelia Burgdorferi

The structure of Structure of the Outer-Membrane Lipoprotein Carrier Protein (Lola) From Borrelia Burgdorferi, PDB code: 7tpm was solved by S.Lovell, M.M.Kashipathy, K.P.Battaile, W.R.Zueckert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.62 / 1.90
Space group	P 41 3 2
Cell size a, b, c (Å), α, β, γ (°)	122.136, 122.136, 122.136, 90, 90, 90
R / Rfree (%)	19.1 / 23.1

The structure of Structure of the Outer-Membrane Lipoprotein Carrier Protein (Lola) From Borrelia Burgdorferi also contains other interesting chemical elements:

Chlorine

(Cl)

3 atoms

The binding sites of Sodium atom in the Structure of the Outer-Membrane Lipoprotein Carrier Protein (Lola) From Borrelia Burgdorferi (pdb code 7tpm). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of the Outer-Membrane Lipoprotein Carrier Protein (Lola) From Borrelia Burgdorferi, PDB code: 7tpm:

Sodium binding site 1 out of 1 in the Structure of the Outer-Membrane Lipoprotein Carrier Protein (Lola) From Borrelia Burgdorferi


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of the Outer-Membrane Lipoprotein Carrier Protein (Lola) From Borrelia Burgdorferi within 5.0Å range: probe atom residue distance (Å) B Occ A:Na305 b:44.8 occ:1.00 O A:HOH500 2.2 48.4 1.0 O A:LEU51 2.3 39.2 1.0 O A:HOH463 2.4 32.4 1.0 O A:HOH545 2.5 45.2 1.0 O A:HOH502 2.5 46.2 1.0 O A:ASN54 2.6 41.5 1.0 C A:LEU51 3.5 41.5 1.0 O A:HOH401 3.6 51.6 1.0 C A:ASN54 3.7 42.8 1.0 CA A:ASN55 4.0 36.5 1.0 N A:LEU51 4.1 32.0 1.0 N A:ASN55 4.3 39.6 1.0 CA A:LEU51 4.3 33.0 1.0 O A:ASP52 4.4 52.8 1.0 O A:HOH412 4.5 38.7 1.0 N A:ASP52 4.5 33.5 1.0 C A:ASP52 4.5 47.7 1.0 C A:ASN55 4.6 31.2 1.0 N A:ASN54 4.6 52.1 1.0 CA A:ASP52 4.7 43.6 1.0 CB A:LEU51 4.7 35.8 1.0 CA A:ASN54 4.8 47.3 1.0 O A:GLN56 4.9 27.5 1.0 C A:ASN50 4.9 30.4 1.0 O A:ASN55 5.0 31.6 1.0

S.Lovell, M.M.Kashipathy, K.P.Battaile, W.R.Zueckert. Structure of the Outer-Membrane Lipoprotein Carrier Protein (Lola) From Borrelia Burgdorferi To Be Published.