Sodium in PDB 7s50: Serial Macromolecular Crystallography at Alba Synchrotron Light Source - Phycocyanin

The structure of Serial Macromolecular Crystallography at Alba Synchrotron Light Source - Phycocyanin, PDB code: 7s50 was solved by J.M.Martin-Garcia, S.Botha, H.Hu, R.Jernigan, A.Castellvi, S.Lisova, F.Gil, B.Calisto, I.Crespo, S.Roy-Chowdbury, A.Grieco, G.Ketawala, U.Weierstall, J.Spence, P.Fromme, N.Zatsepin, R.Boer, X.Carpena, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.42 / 2.10
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	188.5, 188.5, 61, 90, 90, 120
R / Rfree (%)	30.5 / 34.7

The structure of Serial Macromolecular Crystallography at Alba Synchrotron Light Source - Phycocyanin also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Sodium atom in the Serial Macromolecular Crystallography at Alba Synchrotron Light Source - Phycocyanin (pdb code 7s50). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Serial Macromolecular Crystallography at Alba Synchrotron Light Source - Phycocyanin, PDB code: 7s50:

Sodium binding site 1 out of 1 in the Serial Macromolecular Crystallography at Alba Synchrotron Light Source - Phycocyanin


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Serial Macromolecular Crystallography at Alba Synchrotron Light Source - Phycocyanin within 5.0Å range: probe atom residue distance (Å) B Occ B:Na204 b:83.1 occ:1.00 O B:LEU2 2.4 53.7 1.0 OG B:SER103 3.0 55.9 1.0 O B:ASP101 3.1 52.5 1.0 C B:LEU2 3.6 54.3 1.0 CB B:ALA99 3.6 52.2 1.0 N B:VAL104 3.7 56.5 1.0 CG1 B:VAL104 3.7 56.1 1.0 CB B:VAL104 3.9 56.2 1.0 C B:ASP101 3.9 52.9 1.0 CE B:MET1 4.0 56.4 1.0 CB B:ASP101 4.1 53.0 1.0 N B:SER103 4.2 54.5 1.0 CB B:SER103 4.3 55.5 1.0 N B:LEU2 4.4 55.2 1.0 OD2 B:ASP101 4.4 52.8 1.0 CA B:VAL104 4.4 56.6 1.0 CA B:ASP3 4.4 53.0 1.0 N B:ASP3 4.4 53.7 1.0 CA B:ASP101 4.5 52.8 1.0 CA B:SER103 4.5 55.4 1.0 C B:SER103 4.6 56.1 1.0 CA B:LEU2 4.6 54.9 1.0 N B:SER102 4.8 53.3 1.0 CG B:ASP101 4.8 52.9 1.0 CB B:MET1 4.8 56.2 1.0 N B:ASP101 4.8 52.5 1.0 C B:SER102 4.9 54.1 1.0

S.Botha, H.Hu, R.Jernigan, A.Castellvi, S.Lisova, F.Gil, B.Calisto, I.Crespo, S.Roy-Chowdbury, A.Grieco, G.Ketawala, U.Weierstall, J.Spence, P.Fromme, N.Zatsepin, R.Boer, X.Carpena, J.M.Martin-Garcia. Serial Macromolecular Crystallography at Alba To Be Published.