Sodium in PDB 7rvi: Segment From Naked Mole Rat (Elk T174S) Prion Protein 168-176 Qynnqnsfv

The structure of Segment From Naked Mole Rat (Elk T174S) Prion Protein 168-176 Qynnqnsfv also contains other interesting chemical elements:

Arsenic

(As)

1 atom

The binding sites of Sodium atom in the Segment From Naked Mole Rat (Elk T174S) Prion Protein 168-176 Qynnqnsfv (pdb code 7rvi). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Segment From Naked Mole Rat (Elk T174S) Prion Protein 168-176 Qynnqnsfv, PDB code: 7rvi:

Sodium binding site 1 out of 1 in the Segment From Naked Mole Rat (Elk T174S) Prion Protein 168-176 Qynnqnsfv


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Segment From Naked Mole Rat (Elk T174S) Prion Protein 168-176 Qynnqnsfv within 5.0Å range: probe atom residue distance (Å) B Occ A:Na202 b:3.7 occ:1.00 O2 A:CAC201 2.0 11.7 1.0 N A:GLN168 2.1 4.5 1.0 CA A:GLN168 3.0 2.3 1.0 AS A:CAC201 3.2 12.9 1.0 C A:GLN168 3.8 2.1 1.0 C2 A:CAC201 3.8 10.9 1.0 O1 A:CAC201 3.9 8.8 1.0 O A:GLN168 4.1 4.1 1.0 CB A:GLN168 4.3 2.3 1.0 N A:TYR169 4.5 3.0 1.0 CG A:GLN168 4.6 4.0 1.0 C1 A:CAC201 4.9 8.8 1.0

C.Glynn, E.Hernandez, M.Gallagher-Jones, J.Miao, J.A.Rodriguez. Structural and Biophysical Consequences of Sequence Variation in the B2A2 Loop of Mammalian Prions To Be Published.