Sodium in PDB 7rhs: Cryo-Em Structure of Apo-State of Human CNGA3/CNGB3 Channel

The binding sites of Sodium atom in the Cryo-Em Structure of Apo-State of Human CNGA3/CNGB3 Channel (pdb code 7rhs). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Cryo-Em Structure of Apo-State of Human CNGA3/CNGB3 Channel, PDB code: 7rhs:

Sodium binding site 1 out of 1 in the Cryo-Em Structure of Apo-State of Human CNGA3/CNGB3 Channel


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Cryo-Em Structure of Apo-State of Human CNGA3/CNGB3 Channel within 5.0Å range: probe atom residue distance (Å) B Occ D:Na901 b:50.0 occ:1.00 O D:THR407 3.2 64.9 1.0 O B:THR365 3.6 67.4 1.0 O A:THR365 3.9 66.4 1.0 O C:THR365 4.0 69.1 1.0 O D:ILE408 4.1 63.5 1.0 C D:THR407 4.3 64.9 1.0 O C:ILE366 4.4 68.1 1.0 CA D:ILE408 4.4 63.5 1.0 CA A:ILE366 4.5 66.5 1.0 O A:ILE366 4.5 66.5 1.0 O B:ILE366 4.5 66.6 1.0 CA B:ILE366 4.5 66.6 1.0 C D:ILE408 4.5 63.5 1.0 CA C:ILE366 4.6 68.1 1.0 C B:THR365 4.7 67.4 1.0 N D:ILE408 4.8 63.5 1.0 OG1 D:THR407 4.9 64.9 1.0 C A:THR365 4.9 66.4 1.0 C C:ILE366 5.0 68.1 1.0 C A:ILE366 5.0 66.5 1.0

X.Zheng, Z.Hu, H.Li, J.Yang. Structure of the Human Cone Photoreceptor Cyclic Nucleotide-Gated Channel. Nat.Struct.Mol.Biol. V. 29 40 2022.
ISSN: ESSN 1545-9985
PubMed: 34969976
DOI: 10.1038/S41594-021-00699-Y