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Sodium in PDB 7pob: An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles

Enzymatic activity of An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles

All present enzymatic activity of An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles:
2.3.1.29; 2.3.1.47;

Protein crystallography data

The structure of An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles, PDB code: 7pob was solved by A.Basle, B.Ashley, D.Campopiano, J.Marles-Wright, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 94.64 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 67.1, 57.135, 189.443, 90, 92.35, 90
R / Rfree (%) 21.1 / 26.1

Sodium Binding Sites:

The binding sites of Sodium atom in the An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles (pdb code 7pob). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles, PDB code: 7pob:

Sodium binding site 1 out of 1 in 7pob

Go back to Sodium Binding Sites List in 7pob
Sodium binding site 1 out of 1 in the An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na402

b:34.5
occ:1.00
 OE1 A:GLU386 2.1 60.0 1.0
O A:HOH586 2.7 35.2 1.0
CD A:GLU386 3.3 59.5 1.0
HA A:GLU383 3.6 44.6 1.0
O A:HOH593 3.8 35.0 1.0
HB2 A:GLU383 3.9 51.6 1.0
OE2 A:GLU386 3.9 67.0 1.0
HB3 A:GLU386 4.2 53.6 1.0
HB2 A:GLU386 4.2 53.7 1.0
O A:HOH584 4.3 34.9 1.0
CG A:GLU386 4.3 58.2 1.0
CB A:GLU386 4.5 55.7 1.0
O A:HOH606 4.5 46.3 1.0
CA A:GLU383 4.5 44.8 1.0
CB A:GLU383 4.6 50.2 1.0
HG2 A:GLU386 4.8 57.9 1.0
HG3 A:GLU383 4.9 61.5 1.0
HD22 A:LEU314 5.0 46.6 1.0

Reference:

B.Ashley, A.Basle, A.El Ashram, J.Marles-Wright, D.Campopiano. An Irreversible, Promiscuous and Highly Thermostable Claisen-Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles To Be Published.
Page generated: Fri Apr 7 15:38:44 2023

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