Sodium in PDB 7jky: Bromodomain-Containing Protein 4 (BRD4) Bromodomain 1 (BD1) Complexed with YF3-126

The structure of Bromodomain-Containing Protein 4 (BRD4) Bromodomain 1 (BD1) Complexed with YF3-126, PDB code: 7jky was solved by K.M.Ratia, R.Xiong, Y.Li, Z.Shen, J.Zhao, F.Huang, O.Dubrovyskyii, G.R.Thatcher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.74 / 1.16
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	38.196, 42.303, 91.235, 90, 90, 90
R / Rfree (%)	16.2 / 17.6

The binding sites of Sodium atom in the Bromodomain-Containing Protein 4 (BRD4) Bromodomain 1 (BD1) Complexed with YF3-126 (pdb code 7jky). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Bromodomain-Containing Protein 4 (BRD4) Bromodomain 1 (BD1) Complexed with YF3-126, PDB code: 7jky:

Sodium binding site 1 out of 1 in the Bromodomain-Containing Protein 4 (BRD4) Bromodomain 1 (BD1) Complexed with YF3-126


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Bromodomain-Containing Protein 4 (BRD4) Bromodomain 1 (BD1) Complexed with YF3-126 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na202 b:19.4 occ:1.00 CD A:PRO56 3.2 8.9 0.3 CG A:PRO56 3.7 8.7 0.3 CD A:PRO56 4.1 11.2 0.7 CG A:LYS55 4.2 15.2 1.0 NZ A:LYS55 4.2 22.2 1.0 CB A:LYS55 4.3 13.9 1.0 CA A:LYS55 4.4 12.1 1.0 N A:PRO56 4.5 9.3 0.3 O A:HOH355 4.5 17.2 1.0 CD A:LYS55 4.7 16.9 1.0 N A:PRO56 4.8 12.1 0.7

R.Xiong, K.M.Ratia, Y.Li, Z.Shen, J.Zhao, F.Huang, O.Dubrovyskyii, G.R.Thatcher. Bromodomain-Containing Protein 4 (BRD4) Bromodomain 1 (BD1) Complexed with YF3-126 To Be Published.