Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
      1uxu
      1uxv
      1uy0
      1uy1
      1uy2
      1uy3
      1uy4
      1uyp
      1uyz
      1v0h
      1v1r
      1v47
      1v4s
      1v4t
      1v54
      1v55
      1v6p
      1v6s
      1v70
      1v7t
      1v8z
      1vau
      1vbw
      1vby
      1vc5
      1vct
      1ve8
      1vel
      1vi6
      1viz
      1vk1
      1vkg
      1vlm
      1vmf
      1vmh
      1vmj
      1vq4
      1vq5
      1vq6
      1vq7
      1vq8
      1vq9
      1vqk
      1vql
      1vqm
      1vqn
      1vqo
      1vqp
      1vr5
      1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 16 (751-800), PDB files 1uxu - 1vzq






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 751-800 (1uxu - 1vzq):
  1. 1uxu - Structural Basis For Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax
  2. 1uxv - Structural Basis For Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax
  3. 1uy0 - Carbohydrate Binding Module (CBM6CM-2) From Cellvibrio Mixtus Lichenase 5A in Complex With Glc-1,3-Glc-1,4-Glc-1,3-Glc
  4. 1uy1 - Binding Sub-Site Dissection of A Family 6 Carbohydrate-Binding Module By X-Ray Crystallography and Isothermal Titration Calorimetry
  5. 1uy2 - Binding Sub-Site Dissection of A Family 6 Carbohydrate-Binding Module By X-Ray Crystallography and Isothermal Titration Calorimetry
  6. 1uy3 - Binding Sub-Site Dissection of A Family 6 Carbohydrate-Binding Module By X-Ray Crystallography and Isothermal Titration Calorimetry
  7. 1uy4 - Binding Sub-Site Dissection of A Family 6 Carbohydrate-Binding Module By X-Ray Crystallography and Isothermal Titration Calorimetry
  8. 1uyp - The Three-Dimensional Structure of Beta-Fructosidase (Invertase) From Thermotoga Maritima
  9. 1uyz - Carbohydrate Binding Module (CBM6CM-2) From Cellvibrio Mixtus Lichenase 5A in Complex With Xylotetraose
  10. 1v0h - Ascobate Peroxidase From Soybean Cytosol in Complex With Salicylhydroxamic Acid
  11. 1v1r - Crosstalk Between Cofactor Binding and The Phosphorylation Loop Conformation in the Bckd Machine
  12. 1v47 - Crystal Structure of Atp Sulfurylase From Thermus Thermophillus HB8 in Complex With Aps
  13. 1v4s - Crystal Structure of Human Glucokinase
  14. 1v4t - Crystal Structure of Human Glucokinase
  15. 1v54 - Bovine Heart Cytochrome C Oxidase At the Fully Oxidized State
  16. 1v55 - Bovine Heart Cytochrome C Oxidase At the Fully Reduced State
  17. 1v6p - Crystal Structure of Cobrotoxin
  18. 1v6s - Crystal Structure of Phosphoglycerate Kinase From Thermus Thermophilus HB8
  19. 1v70 - Crystal Structure of Probable Antibiotics Synthesis Protein From Thermus Thermophilus HB8
  20. 1v7t - Triclinic Lysozyme With Low Solvent Content Obtained By Phase Transition
  21. 1v8z - X-Ray Crystal Structure of the Tryptophan Synthase B2 Subunit From Hyperthermophile, Pyrococcus Furiosus
  22. 1vau - Xenon Derivative of Hen Egg-White Lysozyme
  23. 1vbw - Crystal Structure of Bitter Gourd Trypsin Inhibitor
  24. 1vby - Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, With C75U Mutaion, and MN2+ Bound
  25. 1vc5 - Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in Edta Solution
  26. 1vct - Crystal Structure of Putative Potassium Channel Related Protein From Pyrococcus Horikoshii
  27. 1ve8 - X-Ray Analyses Of Oligonucleotides Containing 5- Formylcytosine, Suggesting A Structural Reason For Codon- Anticodon Recognition of Mitochondrial Trna-Met; Part 1, D(Cgcgaatt(F5C)Gcg)
  28. 1vel - Mycobacterium Smegmatis Dps Tetragonal Form
  29. 1vi6 - Crystal Structure of Ribosomal Protein S2P
  30. 1viz - Crystal Structure of An Hypothetical Protein
  31. 1vk1 - Conserved Hypothetical Protein From Pyrococcus Furiosus Pfu- 392566-001
  32. 1vkg - Crystal Structure of Human HDAC8 Complexed With Cra-19156
  33. 1vlm - Crystal Structure of Sam-Dependent Methyltransferase, Possible Histamine N-Methyltransferase (TM1293) From Thermotoga Maritima At 2.20 A Resolution
  34. 1vmf - Crystal Structure Of A Ybjq-Like Fold Protein of Unknown Function (BH3498) From Bacillus Halodurans At 1.46 A Resolution
  35. 1vmh - Crystal Structure of An Uncharacterized Conserved Protein Yjbq/UPF0047 Family, Ortholog Yugu B.Subtilis (CA_C0907) From Clostridium Acetobutylicum At 1.31 A Resolution
  36. 1vmj - Crystal Structure of A Putative Thiamin Phosphate Synthase (TM0723) From Thermotoga Maritima MSB8 At 1.52 A Resolution
  37. 1vq4 - The Structure Of The Transition State Analogue "Daa" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  38. 1vq5 - The Structure Of The Transition State Analogue "Raa" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  39. 1vq6 - The Structure Of C-Hpmn and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  40. 1vq7 - The Structure Of The Transition State Analogue "Dca" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  41. 1vq8 - The Structure Of Ccda-Phe-Cap-Bio and The Antibiotic Sparsomycin Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  42. 1vq9 - The Structure Of Cca-Phe-Cap-Bio and The Antibiotic Sparsomycin Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  43. 1vqk - The Structure Of Ccda-Phe-Cap-Bio Bound to The A Site Of the Ribosomal Subunit of Haloarcula Marismortui
  44. 1vql - The Structure Of The Transition State Analogue "Dcsn" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  45. 1vqm - The Structure Of The Transition State Analogue "Dan" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  46. 1vqn - The Structure Of Cc-Hpmn and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  47. 1vqo - The Structure of Ccpmn Bound to the Large Ribosomal Subunit Haloarcula Marismortui
  48. 1vqp - The Structure Of The Transition State Analogue "Rap" Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  49. 1vr5 - Crystal Structure of Oligopeptide Abc Transporter, Periplasmic Oligopeptide-Binding (TM1223) From Thermotoga Maritima At 1.73 A Resolution
  50. 1vzq - Complex of Thrombin With Designed Inhibitor 7165


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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