Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
      1tk6
      1tko
      1tkp
      1tm1
      1tm3
      1tm4
      1tm5
      1tm7
      1tmg
      1to1
      1to2
      1tqy
      1trz
      1tv9
      1tva
      1tw7
      1tw8
      1tx3
      1txk
      1txz
      1ty8
      1u02
      1u4j
      1u7h
      1u8r
      1ubs
      1ud0
      1ud2
      1ud3
      1ud4
      1ud5
      1ud8
      1uda
      1udb
      1udc
      1uhx
      1uhy
      1uo6
      1ur5
      1us3
      1utx
      1uuo
      1uxi
      1uxj
      1uxk
      1uxn
      1uxp
      1uxq
      1uxr
      1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 15 (701-750), PDB files 1tk6 - 1uxt






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 701-750 (1tk6 - 1uxt):
  1. 1tk6 - Iron-Oxo Clusters Biomineralizing on Protein Surfaces. Structural Analysis of H.Salinarum Dpsa in Its Low and High Iron States
  2. 1tko - Iron-Oxo Clusters Biomineralizing on Protein Surfaces. Structural Analysis of H.Salinarum Dpsa in Its Low and High Iron States
  3. 1tkp - Iron-Oxo Clusters Biomineralizing on Protein Surfaces. Structural Analysis of H.Salinarum Dpsa in Its Low and High Iron States
  4. 1tm1 - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2
  5. 1tm3 - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59K Mutant
  6. 1tm4 - Crystal Structure Of the Complex of Subtilsin Bpn'With Chymotrypsin Inhibitor 2 M59G Mutant
  7. 1tm5 - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59A Mutant
  8. 1tm7 - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59Y Mutant
  9. 1tmg - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59F Mutant
  10. 1to1 - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 Y61A Mutant
  11. 1to2 - Crystal Structure Of the Complex of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59K, in pH 9 Cryosoak
  12. 1tqy - The Actinorhodin Ketosynthase/Chain Length Factor
  13. 1trz - Crystallographic Evidence For Dual Coordination Around Zinc in the T3R3 Human Insulin Hexamer
  14. 1tv9 - Human Dna Polymerase Beta Complexed With Nicked Dna Containing A Mismatched Template Adenine and Incoming Cytidine
  15. 1tva - Human Dna Polymerase Beta Complexed With Nicked Dna Containing A Mismatched Template Thymidine and Incoming Cytidine
  16. 1tw7 - Wide Open 1.3A Structure of A Multi-Drug Resistant Hiv-1 Protease Represents A Novel Drug Target
  17. 1tw8 - Hincii Bound to CA2+ and Cognate Dna Gtcgac
  18. 1tx3 - Hincii Bound to Cognate Dna
  19. 1txk - Crystal Structure of Escherichia Coli Opgg
  20. 1txz - Crystal Structure of Yeast YMX7, An Adp-Ribose-1'-Monophosphatase, Complexed With Adp-Ribose
  21. 1ty8 - Crystal Structure of Yeast YMX7, An Adp-Ribose-1'-Monophosphatase, Complexed With Adp
  22. 1u02 - Crystal Structure of Trehalose-6-Phosphate Phosphatase Related Protein
  23. 1u4j - Crystal Structure Of A Carbohydrate Induced Dimer of Group I Phospholipase A2 From Bungarus Caeruleus At 2.1 A Resolution
  24. 1u7h - Structure and A Proposed Mechanism For Ornithine Cyclodeaminase From Pseudomonas Putida
  25. 1u8r - Crystal Structure of An Ider-Dna Complex Reveals A Conformational Change in Activated Ider For Base-Specific Interactions
  26. 1ubs - Tryptophan Synthase (E.C.4.2.1.20) With A Mutation Of Lys 87->Thr In The B Subunit and in the Presence of Ligand L-Serine
  27. 1ud0 - Crystal Structure Of the C-Terminal 10-Kda Subdomain of HSC70
  28. 1ud2 - Crystal Structure of Calcium-Free Alpha-Amylase From Bacillus Sp. Strain Ksm-K38 (AMYK38)
  29. 1ud3 - Crystal Structure of AMYK38 N289H Mutant
  30. 1ud4 - Crystal Structure of Calcium Free Alpha Amylase From Bacillus Sp. Strain Ksm-K38 (AMYK38, in Calcium Containing Solution)
  31. 1ud5 - Crystal Structure of AMYK38 With Rubidium Ion
  32. 1ud8 - Crystal Structure of AMYK38 With Lithium Ion
  33. 1uda - Structure of Udp-Galactose-4-Epimerase Complexed With Udp-4-Deoxy-4- Fluoro-Alpha-D-Galactose
  34. 1udb - Structure of Udp-Galactose-4-Epimerase Complexed With Udp-4-Deoxy-4- Fluoro-Alpha-D-Glucose
  35. 1udc - Structure of Udp-Galactose-4-Epimerase Complexed With Udp-Mannose
  36. 1uhx - Crystal Structure of D(Gcgagagc): the Base-Intercalated Duplex
  37. 1uhy - Crystal Structure of D(Gcgatagc): the Base-Intercalated Duplex
  38. 1uo6 - Porcine Pancreatic Elastase/Xe-Complex
  39. 1ur5 - Stabilization Of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge At the Dimer/Dimer Interface
  40. 1us3 - Native XYLANASE10C From Cellvibrio Japonicus
  41. 1utx - Regulation Of Cytolysin Expression By Enterococcus Faecalis: Role of CYLR2
  42. 1uuo - Rat Dihydroorotate Dehydrogenase (Dhod)in Complex With Brequinar
  43. 1uxi - Large Improvement in The Thermal Stability of A Tetrameric Malate Dehydrogenase By Single Point Mutations At the Dimer-Dimer Interface
  44. 1uxj - Large Improvement in The Thermal Stability of A Tetrameric Malate Dehydrogenase By Single Point Mutations At the Dimer-Dimer Interface
  45. 1uxk - Large Improvement in The Thermal Stability of A Tetrameric Malate Dehydrogenase By Single Point Mutations At the Dimer-Dimer Interface
  46. 1uxn - Structural Basis For Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax
  47. 1uxp - Structural Basis For Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax
  48. 1uxq - Structural Basis For Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax
  49. 1uxr - Structural Basis For Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax
  50. 1uxt - Structural Basis For Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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