Sodium in PDB 4kyu: Crystal Structure of N-Terminal G-Domain of Enga From Bacillus Subtilis

The structure of Crystal Structure of N-Terminal G-Domain of Enga From Bacillus Subtilis, PDB code: 4kyu was solved by V.Singh, B.Prakash, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.27 / 1.70
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	42.260, 43.750, 50.710, 66.88, 79.88, 70.82
R / Rfree (%)	15.8 / 20.1

The structure of Crystal Structure of N-Terminal G-Domain of Enga From Bacillus Subtilis also contains other interesting chemical elements:

Magnesium	(Mg)	2 atoms
Potassium	(K)	3 atoms

The binding sites of Sodium atom in the Crystal Structure of N-Terminal G-Domain of Enga From Bacillus Subtilis (pdb code 4kyu). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of N-Terminal G-Domain of Enga From Bacillus Subtilis, PDB code: 4kyu:

Sodium binding site 1 out of 1 in the Crystal Structure of N-Terminal G-Domain of Enga From Bacillus Subtilis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of N-Terminal G-Domain of Enga From Bacillus Subtilis within 5.0Å range: probe atom residue distance (Å) B Occ B:Na202 b:34.0 occ:1.00 OE1 B:GLN75 2.6 21.7 1.0 O B:HOH312 2.8 14.4 1.0 O B:GLY10 2.9 9.0 1.0 CD B:PRO12 3.5 6.9 1.0 O B:HOH430 3.5 31.2 1.0 CD B:GLN75 3.7 14.9 1.0 NE2 B:GLN71 3.7 13.8 1.0 N B:PRO12 3.7 7.4 1.0 C B:ARG11 3.7 6.1 1.0 CA B:ARG11 3.8 6.5 1.0 CG2 B:ILE72 3.8 10.5 1.0 CG B:PRO12 3.8 9.0 1.0 O B:HOH314 3.9 12.3 1.0 C B:GLY10 3.9 8.8 1.0 O B:HOH351 4.1 17.7 1.0 NZ B:LYS16 4.1 7.9 1.0 CA B:GLY59 4.2 13.3 1.0 NE2 B:GLN75 4.2 11.7 1.0 N B:ARG11 4.3 7.9 1.0 CA B:PRO12 4.4 7.0 1.0 CE B:LYS16 4.4 8.0 1.0 O B:ARG11 4.4 7.4 1.0 CB B:ILE72 4.6 9.8 1.0 O B:HOH463 4.7 44.7 1.0 CB B:PRO12 4.8 9.1 1.0 CD B:GLN71 4.8 16.3 1.0 CA B:ILE72 4.8 9.6 1.0 CG B:GLN75 4.9 10.8 1.0 CB B:GLN75 4.9 9.6 1.0 O B:GLY59 5.0 14.9 1.0

V.Singh, B.Prakash. Crystal Structure of N-Terminal G-Domain of Enga From Bacillus Subtilis To Be Published.