Chemical elements
  Sodium
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    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
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    PDB 1s5e-1tjp
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    PDB 1uxu-1vzq
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    PDB 1xcu-1yf1
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    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
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    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
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    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
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    PDB 3bov-3ccr
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    PDB 3euw-3fgw
    PDB 3fh4-3g3r
      3fh4
      3fhw
      3fhx
      3fhy
      3fi5
      3fiu
      3fiy
      3fiz
      3fj0
      3fju
      3fkr
      3fl7
      3fm1
      3fo3
      3fob
      3fog
      3foj
      3fp4
      3fpc
      3fph
      3fr0
      3frm
      3fsx
      3fsy
      3fvb
      3fvi
      3fvs
      3fvu
      3fvx
      3fw4
      3fw5
      3fyh
      3fyo
      3fyp
      3fz3
      3fz4
      3fzq
      3g0r
      3g0t
      3g13
      3g1n
      3g20
      3g25
      3g3f
      3g3g
      3g3h
      3g3i
      3g3j
      3g3k
      3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in the structure of Crystal Structure of Bglb (pdb 3fiy)






The binding sites of Sodium atom in the structure of Crystal Structure of Bglb (pdb code 3fiy). This binding sites where shown with 5.0 Angstroms radius around Sodium atom.
The 3fiy structure was solved by K.Y.HWANG, K.H.NAM, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)20.0-1.4
Space groupP212121
a (A)70.697
b (A)71.143
c (A)87.373
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)18.5
Rfree (%)20.1


Sodium Binding Sites:

Sodium binding site 1 out of 199 in 3fiy


Sodium binding site 1 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 1 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln296, A: Hoh814, A: Hoh918,

conact list:


AtomAtomDistance (A)
NaNE2 A:Gln2963.35
NaOE1 A:Gln2964.90
NaCD A:Gln2964.53
NaO A:Hoh8145.00
NaO A:Hoh9184.31

interactive model:


Sodium binding site 2 out of 199 in 3fiy


Sodium binding site 2 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 2 out of 199 in 3fiy
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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr53, A: Ile58, A: His94, A: Tyr113, A: Phe115, A: Leu141, A: Na5,

conact list:


AtomAtomDistance (A)
NaOG1 A:Thr534.15
NaCD1 A:Ile583.99
NaNE2 A:His942.86
NaND1 A:His944.65
NaCD2 A:His943.51
NaCE1 A:His943.74
NaCG A:His944.57
NaCE2 A:Tyr1133.38
NaCD2 A:Tyr1134.70
NaCZ A:Tyr1133.49
NaCE1 A:Tyr1134.84
NaOH A:Tyr1132.73
NaCB A:Phe1153.42
NaCD1 A:Phe1154.83
NaCD2 A:Phe1154.49
NaCG A:Phe1154.06
NaCA A:Phe1154.73
NaCD1 A:Leu1414.10
NaCD2 A:Leu1413.46
NaCG A:Leu1414.41
NaNA A:Na53.09

interactive model:


Sodium binding site 3 out of 199 in 3fiy


Sodium binding site 3 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 3 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser55, A: Ser116, A: Ile117, A: Ala118, A: Thr155, A: Leu156, A: Tyr157, A: His158, A: Trp159, A: Asp160, A: Na6, A: Na9,

conact list:


AtomAtomDistance (A)
NaN A:Ser554.97
NaCB A:Ser554.45
NaOG A:Ser553.18
NaO A:Ser1164.85
NaCB A:Ser1163.29
NaOG A:Ser1162.89
NaC A:Ser1164.12
NaCA A:Ser1164.27
NaO A:Ile1172.81
NaN A:Ile1173.76
NaC A:Ile1173.60
NaCA A:Ile1174.33
NaN A:Ala1184.39
NaCA A:Ala1184.58
NaO A:Thr1554.29
NaO A:Leu1563.87
NaC A:Leu1564.35
NaN A:Tyr1574.47
NaC A:Tyr1573.90
NaCA A:Tyr1574.07
NaO A:His1584.24
NaN A:His1582.91
NaCB A:His1583.34
NaC A:His1584.02
NaCG A:His1584.78
NaCA A:His1583.55
NaN A:Trp1594.69
NaN A:Asp1604.86
NaOD2 A:Asp1603.75
NaOD1 A:Asp1602.77
NaCG A:Asp1603.65
NaNA A:Na63.30
NaNA A:Na94.45

interactive model:


Sodium binding site 4 out of 199 in 3fiy


Sodium binding site 4 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 4 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr53, A: Ser54, A: Arg114, A: Phe115, A: Ser116, A: Thr155, A: His158,

conact list:


AtomAtomDistance (A)
NaO A:Thr533.00
NaC A:Thr534.15
NaN A:Ser544.71
NaCB A:Ser544.39
NaCA A:Ser544.33
NaO A:Arg1144.82
NaCD A:Arg1144.16
NaCZ A:Arg1143.40
NaC A:Arg1144.80
NaCG A:Arg1144.00
NaNE A:Arg1143.48
NaNH2 A:Arg1143.46
NaNH1 A:Arg1143.93
NaO A:Phe1153.72
NaN A:Phe1154.59
NaC A:Phe1153.69
NaCA A:Phe1154.33
NaN A:Ser1163.79
NaCB A:Ser1163.55
NaOG A:Ser1164.47
NaCA A:Ser1164.04
NaN A:Thr1554.89
NaCB A:Thr1553.36
NaCG2 A:Thr1553.98
NaOG1 A:Thr1552.89
NaCA A:Thr1554.72
NaNE2 A:His1583.81
NaCB A:His1584.52
NaCD2 A:His1583.02
NaCE1 A:His1584.96
NaCG A:His1584.02

interactive model:


Sodium binding site 5 out of 199 in 3fiy


Sodium binding site 5 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 5 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser54, A: Ser55, A: Ile58, A: Glu59, A: His94, A: Phe115, A: Ser116, A: Phe137, A: Tyr138, A: Leu141, A: Na2,

conact list:


AtomAtomDistance (A)
NaO A:Ser545.00
NaC A:Ser544.70
NaN A:Ser554.19
NaCB A:Ser554.05
NaCA A:Ser553.92
NaCD1 A:Ile584.70
NaCG1 A:Ile584.94
NaOE1 A:Glu594.86
NaOE2 A:Glu592.77
NaCD A:Glu593.73
NaCG A:Glu593.98
NaNE2 A:His944.83
NaCD2 A:His944.61
NaCB A:Phe1153.96
NaCD2 A:Phe1154.13
NaC A:Phe1154.90
NaCG A:Phe1154.49
NaCA A:Phe1154.86
NaO A:Ser1162.90
NaN A:Ser1164.14
NaC A:Ser1164.08
NaCA A:Ser1164.77
NaCE2 A:Phe1374.68
NaCD1 A:Tyr1384.84
NaCZ A:Tyr1384.68
NaCE1 A:Tyr1383.91
NaOH A:Tyr1384.43
NaCD2 A:Leu1414.72
NaNA A:Na23.09

interactive model:


Sodium binding site 6 out of 199 in 3fiy


Sodium binding site 6 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 6 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile117, A: Ala118, A: Trp119, A: Leu156, A: Tyr157, A: His158, A: Asp160, A: Leu161, A: Tyr183, A: Na3, A: Na14,

conact list:


AtomAtomDistance (A)
NaO A:Ile1173.10
NaC A:Ile1174.23
NaN A:Ala1184.72
NaC A:Ala1184.12
NaCA A:Ala1184.22
NaN A:Trp1193.10
NaCB A:Trp1193.19
NaCD2 A:Trp1194.82
NaCE3 A:Trp1194.53
NaCG A:Trp1194.40
NaCA A:Trp1193.75
NaO A:Leu1563.37
NaC A:Leu1564.44
NaN A:Tyr1574.81
NaCB A:Tyr1574.79
NaCD1 A:Tyr1573.89
NaC A:Tyr1574.82
NaCE1 A:Tyr1574.49
NaCG A:Tyr1574.69
NaCA A:Tyr1574.13
NaN A:His1584.38
NaO A:Asp1603.61
NaN A:Asp1604.51
NaCB A:Asp1604.67
NaOD2 A:Asp1604.48
NaC A:Asp1604.13
NaOD1 A:Asp1602.86
NaCG A:Asp1603.80
NaCA A:Asp1604.62
NaN A:Leu1614.84
NaCE2 A:Tyr1834.70
NaCZ A:Tyr1834.67
NaOH A:Tyr1834.04
NaNA A:Na33.30
NaNA A:Na144.28

interactive model:


Sodium binding site 7 out of 199 in 3fiy


Sodium binding site 7 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 7 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr332, A: Asn333, A: Thr356, A: Trp360, A: Glu361, A: Ile362, A: Tyr410, A: Na8, A: Na16, A: Na485,

conact list:


AtomAtomDistance (A)
NaO A:Tyr3323.01
NaCB A:Tyr3324.95
NaC A:Tyr3323.97
NaCA A:Tyr3324.89
NaN A:Asn3334.68
NaCB A:Asn3333.95
NaCG A:Asn3334.91
NaCA A:Asn3334.54
NaCB A:Thr3564.65
NaCG2 A:Thr3563.53
NaOG1 A:Thr3564.49
NaCB A:Trp3603.65
NaC A:Trp3603.57
NaCG A:Trp3604.92
NaCA A:Trp3604.27
NaO A:Trp3603.06
NaO A:Glu3612.87
NaN A:Glu3614.14
NaC A:Glu3613.39
NaCA A:Glu3614.33
NaN A:Ile3623.80
NaCB A:Ile3624.41
NaCG1 A:Ile3623.80
NaCA A:Ile3623.82
NaCE2 A:Tyr4103.50
NaCD2 A:Tyr4104.42
NaCZ A:Tyr4104.29
NaOH A:Tyr4104.15
NaNA A:Na84.88
NaNA A:Na163.01
NaNA A:Na4854.20

interactive model:


Sodium binding site 8 out of 199 in 3fiy


Sodium binding site 8 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 8 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr356, A: Met358, A: Trp360, A: Gly389, A: Ala390, A: Ala391, A: Phe450, A: Na7, A: Na16,

conact list:


AtomAtomDistance (A)
NaCB A:Thr3563.34
NaCG2 A:Thr3563.60
NaOG1 A:Thr3562.79
NaCA A:Thr3564.81
NaN A:Met3584.56
NaCB A:Met3583.81
NaCG A:Met3583.37
NaCA A:Met3584.83
NaCB A:Trp3604.57
NaCD2 A:Trp3604.09
NaCE3 A:Trp3603.41
NaCG A:Trp3604.59
NaCZ3 A:Trp3603.91
NaCH2 A:Trp3604.91
NaO A:Gly3894.55
NaN A:Ala3904.83
NaC A:Ala3903.86
NaCB A:Ala3904.25
NaCA A:Ala3903.69
NaO A:Ala3914.37
NaN A:Ala3913.09
NaC A:Ala3914.69
NaCB A:Ala3913.78
NaCA A:Ala3913.99
NaCE2 A:Phe4503.46
NaCD2 A:Phe4504.53
NaCZ A:Phe4503.45
NaCE1 A:Phe4504.50
NaNA A:Na74.88
NaNA A:Na162.94

interactive model:


Sodium binding site 9 out of 199 in 3fiy


Sodium binding site 9 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 9 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 9 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser54, A: Ser55, A: Tyr56, A: Gln57, A: Ser116, A: His158, A: Asp160, A: Trp442, A: Na3,

conact list:


AtomAtomDistance (A)
NaO A:Ser544.55
NaCB A:Ser543.43
NaOG A:Ser542.88
NaC A:Ser543.93
NaCA A:Ser544.25
NaN A:Ser553.59
NaCB A:Ser554.41
NaOG A:Ser553.55
NaC A:Ser553.92
NaCA A:Ser554.09
NaN A:Tyr562.93
NaCB A:Tyr563.35
NaC A:Tyr564.34
NaCG A:Tyr564.77
NaCA A:Tyr563.65
NaN A:Gln574.04
NaOE1 A:Gln574.98
NaCG A:Gln574.77
NaOG A:Ser1163.97
NaO A:His1582.93
NaCB A:His1583.86
NaND1 A:His1583.97
NaC A:His1584.00
NaCE1 A:His1584.93
NaCG A:His1584.18
NaCA A:His1584.57
NaN A:Asp1604.77
NaCB A:Asp1604.60
NaOD2 A:Asp1603.56
NaOD1 A:Asp1604.13
NaCG A:Asp1603.86
NaCZ3 A:Trp4424.59
NaCZ2 A:Trp4424.07
NaCH2 A:Trp4423.52
NaNA A:Na34.45

interactive model:


Sodium binding site 10 out of 199 in 3fiy


Sodium binding site 10 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 10 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 10 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Met205, A: Leu259, A: Asn260, A: Phe261, A: Gln284, A: Asn285, A: Phe288, A: Na498, A: Na503, A: Na519, A: Na532,

conact list:


AtomAtomDistance (A)
NaCB A:Met2054.10
NaCG A:Met2054.80
NaCB A:Leu2593.59
NaCD1 A:Leu2594.30
NaCD2 A:Leu2594.21
NaC A:Leu2594.42
NaCG A:Leu2594.26
NaCA A:Leu2594.30
NaO A:Asn2602.95
NaN A:Asn2603.91
NaC A:Asn2604.08
NaOD1 A:Asn2604.35
NaCG A:Asn2604.96
NaCA A:Asn2604.67
NaCE2 A:Phe2614.36
NaCD2 A:Phe2614.50
NaCZ A:Phe2614.71
NaCG A:Phe2614.97
NaO A:Gln2844.37
NaO A:Asn2854.63
NaCB A:Phe2884.52
NaCE2 A:Phe2884.89
NaCD2 A:Phe2884.03
NaCG A:Phe2884.70
NaNA A:Na4982.96
NaNA A:Na5033.07
NaNA A:Na5192.99
NaNA A:Na5323.90

interactive model:


Sodium binding site 11 out of 199 in 3fiy


Sodium binding site 11 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 11 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 11 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln57, A: Trp434, A: Asn439, A: Phe440, A: Glu441, A: Phe450, A: Na491, A: Hoh920,

conact list:


AtomAtomDistance (A)
NaNE2 A:Gln573.83
NaCD A:Gln574.91
NaCD1 A:Trp4344.10
NaCZ2 A:Trp4344.01
NaCE2 A:Trp4343.86
NaNE1 A:Trp4343.05
NaO A:Asn4394.69
NaN A:Asn4394.72
NaCB A:Asn4394.83
NaND2 A:Asn4392.80
NaC A:Asn4394.83
NaOD1 A:Asn4393.56
NaCG A:Asn4393.50
NaO A:Phe4404.85
NaC A:Phe4404.92
NaN A:Glu4414.72
NaOE1 A:Glu4412.71
NaCB A:Glu4414.17
NaOE2 A:Glu4414.79
NaCD A:Glu4413.84
NaCG A:Glu4414.49
NaCA A:Glu4414.39
NaN A:Phe4504.60
NaCB A:Phe4503.56
NaCD1 A:Phe4503.39
NaCD2 A:Phe4504.85
NaCE1 A:Phe4504.29
NaCG A:Phe4503.75
NaCA A:Phe4504.71
NaNA A:Na4913.02
NaO A:Hoh9203.63

interactive model:


Sodium binding site 12 out of 199 in 3fiy


Sodium binding site 12 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 12 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 12 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Phe261, A: Asn262, A: Asn330, A: Tyr331, A: Tyr332, A: Asn333, A: Na558, A: Na570,

conact list:


AtomAtomDistance (A)
NaO A:Phe2612.74
NaN A:Phe2614.72
NaC A:Phe2613.85
NaCA A:Phe2614.94
NaN A:Asn2624.54
NaCB A:Asn2624.77
NaND2 A:Asn2624.71
NaOD1 A:Asn2623.14
NaCG A:Asn2623.99
NaCA A:Asn2624.38
NaO A:Asn3304.48
NaC A:Asn3304.93
NaO A:Tyr3314.82
NaN A:Tyr3314.63
NaCB A:Tyr3314.50
NaCD1 A:Tyr3313.90
NaC A:Tyr3313.65
NaCE1 A:Tyr3314.43
NaCG A:Tyr3314.34
NaCA A:Tyr3313.62
NaN A:Tyr3322.79
NaCB A:Tyr3323.75
NaCD2 A:Tyr3324.25
NaC A:Tyr3323.90
NaCG A:Tyr3324.51
NaCA A:Tyr3323.62
NaO A:Asn3333.35
NaN A:Asn3333.18
NaCB A:Asn3334.91
NaC A:Asn3334.17
NaOD1 A:Asn3333.75
NaCG A:Asn3334.37
NaCA A:Asn3334.20
NaNA A:Na5584.78
NaNA A:Na5703.31

interactive model:


Sodium binding site 13 out of 199 in 3fiy


Sodium binding site 13 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 13 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 13 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser55, A: Tyr56, A: Gln57, A: Ile58, A: Glu59, A: Gly60, A: Gly88, A: Asp89, A: Val90, A: Ala91, A: Na487, A: Na513,

conact list:


AtomAtomDistance (A)
NaO A:Ser553.86
NaC A:Ser554.78
NaO A:Tyr562.61
NaN A:Tyr564.85
NaCB A:Tyr564.83
NaCD1 A:Tyr564.33
NaCD2 A:Tyr564.93
NaCZ A:Tyr564.99
NaC A:Tyr563.43
NaCE1 A:Tyr564.59
NaCG A:Tyr564.51
NaCA A:Tyr563.85
NaN A:Gln574.47
NaC A:Gln574.59
NaCA A:Gln574.88
NaO A:Ile584.91
NaN A:Ile584.36
NaC A:Ile584.31
NaCA A:Ile584.79
NaN A:Glu593.74
NaCB A:Glu594.40
NaC A:Glu593.89
NaCA A:Glu594.08
NaO A:Gly604.34
NaN A:Gly602.84
NaC A:Gly604.43
NaCA A:Gly603.54
NaO A:Gly882.67
NaC A:Gly883.59
NaCA A:Gly883.80
NaN A:Asp894.84
NaO A:Val904.91
NaC A:Val904.94
NaN A:Ala914.94
NaCB A:Ala913.64
NaCA A:Ala914.93
NaNA A:Na4872.87
NaNA A:Na5134.86

interactive model:


Sodium binding site 14 out of 199 in 3fiy


Sodium binding site 14 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 14 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 14 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Lys67, A: Ser70, A: Ala118, A: Trp119, A: Ala120, A: Arg121, A: Asp160, A: Leu161, A: Pro162, A: Na6, A: Na499, A: Na504,

conact list:


AtomAtomDistance (A)
NaCE A:Lys674.82
NaCB A:Ser704.05
NaOG A:Ser704.89
NaO A:Ala1184.14
NaC A:Ala1183.44
NaCB A:Ala1183.68
NaCA A:Ala1183.58
NaN A:Trp1193.26
NaCB A:Trp1194.25
NaC A:Trp1193.84
NaCA A:Trp1193.96
NaO A:Trp1194.99
NaN A:Ala1202.84
NaC A:Ala1204.54
NaCB A:Ala1203.19
NaCA A:Ala1203.58
NaN A:Arg1214.56
NaO A:Asp1602.77
NaCB A:Asp1603.60
NaOD2 A:Asp1603.78
NaC A:Asp1603.86
NaOD1 A:Asp1604.11
NaCG A:Asp1603.62
NaCA A:Asp1604.38
NaN A:Leu1614.99
NaC A:Leu1614.97
NaN A:Pro1624.95
NaCG A:Pro1624.94
NaNA A:Na64.28
NaNA A:Na4994.24
NaNA A:Na5043.02

interactive model:


Sodium binding site 15 out of 199 in 3fiy


Sodium binding site 15 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 15 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 15 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln469, A: Arg472, A: Na492, A: Na590, A: Na664, A: Hoh715,

conact list:


AtomAtomDistance (A)
NaO A:Gln4694.63
NaNE2 A:Gln4693.72
NaOE1 A:Gln4694.70
NaCB A:Gln4693.48
NaCD A:Gln4693.87
NaC A:Gln4694.78
NaCG A:Gln4693.67
NaCA A:Gln4694.22
NaCZ A:Arg4724.02
NaNE A:Arg4724.13
NaNH2 A:Arg4723.06
NaNA A:Na4923.02
NaNA A:Na5903.90
NaNA A:Na6644.40
NaO A:Hoh7154.75

interactive model:


Sodium binding site 16 out of 199 in 3fiy


Sodium binding site 16 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 16 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 16 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr332, A: Thr356, A: Trp360, A: Gly389, A: Ala390, A: Ala391, A: Tyr410, A: Phe450, A: Na7, A: Na8,

conact list:


AtomAtomDistance (A)
NaO A:Tyr3323.84
NaCB A:Tyr3323.76
NaCD1 A:Tyr3323.56
NaC A:Tyr3324.33
NaCE1 A:Tyr3324.62
NaCG A:Tyr3324.12
NaCA A:Tyr3324.25
NaCB A:Thr3564.61
NaCG2 A:Thr3563.78
NaOG1 A:Thr3564.39
NaCB A:Trp3604.55
NaCD2 A:Trp3604.70
NaCE3 A:Trp3603.69
NaCZ3 A:Trp3604.37
NaO A:Gly3892.73
NaC A:Gly3893.81
NaN A:Ala3904.24
NaC A:Ala3904.82
NaCB A:Ala3903.82
NaCA A:Ala3903.67
NaN A:Ala3914.81
NaCE2 A:Tyr4103.63
NaCD2 A:Tyr4104.54
NaCZ A:Tyr4103.73
NaCE1 A:Tyr4104.69
NaOH A:Tyr4103.53
NaCE2 A:Phe4504.61
NaNA A:Na73.01
NaNA A:Na82.94

interactive model:


Sodium binding site 17 out of 199 in 3fiy


Sodium binding site 17 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 17 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 17 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu286, A: Leu287, A: Phe288, A: Glu290, A: Pro291, A: Gln296, A: Tyr297, A: Asn298, A: Thr301,

conact list:


AtomAtomDistance (A)
NaO A:Glu2863.78
NaC A:Glu2864.48
NaO A:Leu2872.85
NaN A:Leu2874.44
NaCB A:Leu2874.62
NaCD1 A:Leu2874.11
NaC A:Leu2873.55
NaCG A:Leu2874.97
NaCA A:Leu2873.56
NaN A:Phe2884.81
NaCB A:Glu2904.11
NaCG A:Glu2904.74
NaN A:Pro2914.84
NaCD A:Pro2913.66
NaCG A:Pro2914.41
NaO A:Gln2964.61
NaO A:Tyr2974.88
NaN A:Tyr2974.74
NaCB A:Tyr2973.81
NaCD1 A:Tyr2973.55
NaC A:Tyr2973.67
NaCE1 A:Tyr2974.59
NaCG A:Tyr2974.16
NaCA A:Tyr2973.43
NaO A:Asn2984.47
NaN A:Asn2982.98
NaCB A:Asn2984.13
NaND2 A:Asn2983.57
NaC A:Asn2984.74
NaOD1 A:Asn2983.48
NaCG A:Asn2983.44
NaCA A:Asn2984.05
NaCB A:Thr3013.45
NaCG2 A:Thr3013.88
NaOG1 A:Thr3012.92
NaCA A:Thr3014.88

interactive model:


Sodium binding site 18 out of 199 in 3fiy


Sodium binding site 18 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 18 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 18 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His238, A: Leu242, A: Leu292, A: Thr319, A: Ile320, A: Ser321, A: Ala322, A: Pro323, A: Ile324, A: Na649,

conact list:


AtomAtomDistance (A)
NaNE2 A:His2384.03
NaND1 A:His2383.58
NaCE1 A:His2382.91
NaCG A:His2384.89
NaCD2 A:Leu2423.78
NaO A:Leu2924.27
NaCB A:Leu2924.94
NaCD2 A:Leu2923.75
NaCG A:Leu2924.98
NaCA A:Leu2924.90
NaO A:Thr3194.71
NaO A:Ile3202.76
NaC A:Ile3203.76
NaCA A:Ile3204.85
NaO A:Ser3214.49
NaN A:Ser3214.33
NaC A:Ser3213.92
NaCA A:Ser3214.09
NaO A:Ala3222.67
NaN A:Ala3223.81
NaC A:Ala3223.80
NaCB A:Ala3224.82
NaCA A:Ala3224.37
NaN A:Pro3234.90
NaC A:Pro3234.84
NaN A:Ile3244.68
NaCB A:Ile3244.70
NaCG2 A:Ile3243.36
NaNA A:Na6493.51

interactive model:


Sodium binding site 19 out of 199 in 3fiy


Sodium binding site 19 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 19 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 19 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr375, A: Gly379, A: Lys380, A: Leu381, A: Ile383, A: Gly425, A: Val426, A: Asp427,

conact list:


AtomAtomDistance (A)
NaCB A:Thr3753.92
NaCG2 A:Thr3753.75
NaOG1 A:Thr3752.99
NaCA A:Thr3754.60
NaO A:Gly3794.25
NaC A:Gly3794.89
NaO A:Lys3804.38
NaN A:Lys3804.66
NaCB A:Lys3804.11
NaC A:Lys3803.63
NaCG A:Lys3803.67
NaCA A:Lys3803.50
NaO A:Leu3812.89
NaN A:Leu3813.58
NaCD1 A:Leu3814.50
NaC A:Leu3813.93
NaCA A:Leu3814.41
NaCB A:Ile3835.00
NaCD1 A:Ile3833.88
NaCG1 A:Ile3834.29
NaO A:Gly4254.53
NaCB A:Val4264.34
NaCG2 A:Val4264.95
NaC A:Val4263.87
NaCG1 A:Val4263.71
NaCA A:Val4263.80
NaO A:Asp4274.59
NaN A:Asp4273.00
NaCB A:Asp4273.77
NaC A:Asp4274.43
NaCA A:Asp4273.87

interactive model:


Sodium binding site 20 out of 199 in 3fiy


Sodium binding site 20 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 20 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 20 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr331, A: Tyr332, A: Asn333, A: Pro334, A: Glu361, A: Ile362, A: Ala363, A: Pro364, A: Tyr410, A: His414, A: Na7,

conact list:


AtomAtomDistance (A)
NaCE2 A:Tyr3313.46
NaCD2 A:Tyr3314.59
NaCZ A:Tyr3313.65
NaCE1 A:Tyr3314.87
NaOH A:Tyr3313.16
NaO A:Tyr3322.86
NaC A:Tyr3323.71
NaCA A:Tyr3324.89
NaN A:Asn3334.10
NaCB A:Asn3334.53
NaC A:Asn3334.71
NaCA A:Asn3333.75
NaN A:Pro3344.81
NaCD A:Pro3344.09
NaO A:Glu3613.45
NaC A:Glu3614.39
NaO A:Ile3624.96
NaN A:Ile3624.59
NaCB A:Ile3625.00
NaCG2 A:Ile3624.94
NaC A:Ile3623.79
NaCA A:Ile3623.83
NaO A:Ala3633.20
NaN A:Ala3632.83
NaC A:Ala3633.36
NaCB A:Ala3634.22
NaCA A:Ala3633.61
NaN A:Pro3644.05
NaCD A:Pro3644.98
NaCA A:Pro3644.62
NaCE2 A:Tyr4104.38
NaCZ A:Tyr4104.54
NaOH A:Tyr4104.06
NaNE2 A:His4142.83
NaND1 A:His4144.77
NaCD2 A:His4143.98
NaCE1 A:His4143.52
NaNA A:Na74.20

interactive model:


Sodium binding site 21 out of 199 in 3fiy


Sodium binding site 21 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 21 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 21 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser55, A: Tyr56, A: Glu59, A: Gly60, A: Lys67, A: Ala118, A: Arg121, A: Asp160, A: Na487, A: Na499, A: Na504, A: Na513,

conact list:


AtomAtomDistance (A)
NaO A:Ser554.07
NaCB A:Ser554.33
NaOG A:Ser554.94
NaC A:Ser554.28
NaCA A:Ser554.89
NaN A:Tyr564.56
NaCA A:Tyr564.65
NaOE1 A:Glu592.67
NaCB A:Glu593.90
NaOE2 A:Glu594.59
NaCD A:Glu593.70
NaCG A:Glu594.34
NaO A:Gly604.46
NaCE A:Lys673.61
NaCD A:Lys674.10
NaNZ A:Lys674.89
NaCB A:Ala1183.47
NaCA A:Ala1184.85
NaCD A:Arg1214.53
NaCZ A:Arg1213.71
NaCG A:Arg1214.61
NaNE A:Arg1213.51
NaNH2 A:Arg1213.36
NaNH1 A:Arg1214.78
NaOD2 A:Asp1604.73
NaNA A:Na4872.89
NaNA A:Na4994.54
NaNA A:Na5042.89
NaNA A:Na5134.25

interactive model:


Sodium binding site 22 out of 199 in 3fiy


Sodium binding site 22 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 22 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 22 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser55, A: Tyr56, A: Glu59, A: Gly60, A: Ala61, A: Trp62, A: Lys67, A: Gly88, A: Arg121, A: Na13, A: Na486, A: Na499, A: Na504, A: Na513,

conact list:


AtomAtomDistance (A)
NaO A:Ser554.40
NaO A:Tyr564.78
NaCD1 A:Tyr564.38
NaCE1 A:Tyr564.73
NaCA A:Tyr564.59
NaN A:Glu594.93
NaOE1 A:Glu594.61
NaCB A:Glu593.95
NaC A:Glu594.16
NaCA A:Glu594.50
NaO A:Gly602.70
NaN A:Gly603.34
NaC A:Gly603.52
NaCA A:Gly603.73
NaO A:Ala614.82
NaN A:Ala614.70
NaC A:Ala614.56
NaN A:Trp624.22
NaCB A:Trp624.29
NaCA A:Trp624.06
NaCE A:Lys674.42
NaCD A:Lys674.95
NaO A:Gly883.93
NaCZ A:Arg1214.85
NaNH2 A:Arg1213.83
NaNA A:Na132.87
NaNA A:Na4862.89
NaNA A:Na4994.79
NaNA A:Na5044.67
NaNA A:Na5132.90

interactive model:


Sodium binding site 23 out of 199 in 3fiy


Sodium binding site 23 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 23 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 23 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly239, A: Gln240, A: Leu242, A: Gln243, A: Thr319, A: Ala322, A: Hoh665,

conact list:


AtomAtomDistance (A)
NaO A:Gly2392.75
NaC A:Gly2393.55
NaCA A:Gly2393.70
NaN A:Gln2404.77
NaCB A:Leu2423.81
NaCD2 A:Leu2423.93
NaC A:Leu2424.46
NaCG A:Leu2424.10
NaCA A:Leu2424.66
NaNE2 A:Gln2434.18
NaN A:Gln2433.93
NaOE1 A:Gln2434.83
NaCB A:Gln2434.38
NaCD A:Gln2433.98
NaCG A:Gln2433.22
NaCA A:Gln2434.46
NaO A:Thr3192.82
NaCB A:Thr3194.81
NaCG2 A:Thr3194.06
NaC A:Thr3193.85
NaCA A:Thr3194.27
NaN A:Ala3224.60
NaCB A:Ala3223.22
NaCA A:Ala3224.48
NaO A:Hoh6652.85

interactive model:


Sodium binding site 24 out of 199 in 3fiy


Sodium binding site 24 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 24 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 24 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu108, A: Gly109, A: Arg472, A: Asp473, A: Ile475, A: Ala476, A: Na559,

conact list:


AtomAtomDistance (A)
NaO A:Leu1082.90
NaC A:Leu1083.79
NaCA A:Leu1084.96
NaO A:Gly1094.58
NaN A:Gly1094.22
NaC A:Gly1094.56
NaCA A:Gly1093.86
NaO A:Arg4722.83
NaCB A:Arg4724.17
NaCD A:Arg4724.34
NaC A:Arg4723.67
NaCG A:Arg4723.42
NaCA A:Arg4723.87
NaN A:Asp4734.88
NaN A:Ile4754.99
NaCB A:Ile4753.76
NaCD1 A:Ile4754.86
NaCG2 A:Ile4753.94
NaC A:Ile4754.32
NaCG1 A:Ile4754.83
NaCA A:Ile4754.57
NaN A:Ala4763.67
NaCB A:Ala4763.85
NaCA A:Ala4764.12
NaNA A:Na5594.52

interactive model:


Sodium binding site 25 out of 199 in 3fiy


Sodium binding site 25 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 25 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 25 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser87, A: Gly88, A: Asp89, A: Val90, A: Ala91, A: Tyr446, A: Na551, A: Na613, A: Hoh687, A: Hoh754, A: Hoh826, A: Hoh852, A: Hoh884,

conact list:


AtomAtomDistance (A)
NaO A:Ser872.94
NaN A:Ser874.78
NaOG A:Ser874.11
NaC A:Ser873.81
NaCA A:Ser874.80
NaO A:Gly884.67
NaN A:Gly884.39
NaC A:Gly883.96
NaCA A:Gly884.21
NaN A:Asp893.54
NaCB A:Asp894.18
NaC A:Asp893.93
NaCA A:Asp894.07
NaO A:Val905.00
NaN A:Val902.89
NaCB A:Val903.55
NaCG2 A:Val904.16
NaC A:Val903.79
NaCG1 A:Val904.83
NaCA A:Val903.55
NaN A:Ala913.05
NaCB A:Ala914.96
NaCA A:Ala914.05
NaCE2 A:Tyr4464.07
NaCZ A:Tyr4464.02
NaOH A:Tyr4463.26
NaNA A:Na5513.43
NaNA A:Na6133.91
NaO A:Hoh6874.56
NaO A:Hoh7544.50
NaO A:Hoh8264.38
NaO A:Hoh8523.12
NaO A:Hoh8844.58

interactive model:


Sodium binding site 26 out of 199 in 3fiy


Sodium binding site 26 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 26 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 26 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu437, A: Asp438, A: Asn439, A: Glu441, A: Lys448, A: Arg449, A: Phe450, A: Gly451, A: Na11, A: Na521,

conact list:


AtomAtomDistance (A)
NaO A:Leu4374.56
NaO A:Asp4384.98
NaN A:Asp4384.86
NaCB A:Asp4384.37
NaC A:Asp4383.81
NaOD1 A:Asp4384.64
NaCG A:Asp4384.96
NaCA A:Asp4383.73
NaO A:Asn4393.32
NaN A:Asn4392.94
NaCB A:Asn4394.55
NaND2 A:Asn4393.86
NaC A:Asn4393.89
NaOD1 A:Asn4394.24
NaCG A:Asn4393.99
NaCA A:Asn4393.89
NaOE1 A:Glu4414.96
NaCB A:Glu4414.75
NaO A:Lys4482.92
NaC A:Lys4483.79
NaO A:Arg4494.81
NaN A:Arg4494.03
NaCB A:Arg4494.64
NaC A:Arg4493.62
NaCA A:Arg4493.43
NaN A:Phe4502.89
NaCB A:Phe4503.77
NaCD1 A:Phe4504.10
NaC A:Phe4504.57
NaCG A:Phe4504.45
NaCA A:Phe4503.86
NaN A:Gly4514.39
NaNA A:Na113.02
NaNA A:Na5213.44

interactive model:


Sodium binding site 27 out of 199 in 3fiy


Sodium binding site 27 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 27 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 27 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln469, A: Trp470, A: Arg472, A: Asp473, A: Na15, A: Na590, A: Na595,

conact list:


AtomAtomDistance (A)
NaO A:Gln4692.77
NaCB A:Gln4694.19
NaC A:Gln4693.64
NaCA A:Gln4693.90
NaN A:Trp4704.85
NaCB A:Arg4723.66
NaCD A:Arg4723.77
NaCZ A:Arg4723.84
NaC A:Arg4724.55
NaCG A:Arg4723.58
NaNE A:Arg4722.96
NaNH2 A:Arg4723.85
NaCA A:Arg4724.64
NaN A:Asp4734.04
NaCB A:Asp4734.51
NaOD2 A:Asp4733.61
NaOD1 A:Asp4732.75
NaCG A:Asp4733.37
NaCA A:Asp4734.62
NaNA A:Na153.02
NaNA A:Na5903.84
NaNA A:Na5954.63

interactive model:


Sodium binding site 28 out of 199 in 3fiy


Sodium binding site 28 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 28 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 28 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu242, A: Arg246, A: Ala322, A: Pro323, A: Hoh665, A: Hoh667,

conact list:


AtomAtomDistance (A)
NaCD1 A:Leu2424.50
NaCD2 A:Leu2423.76
NaCG A:Leu2423.93
NaCD A:Arg2463.80
NaCZ A:Arg2463.71
NaCG A:Arg2463.64
NaNE A:Arg2462.90
NaNH2 A:Arg2463.64
NaNH1 A:Arg2465.00
NaO A:Ala3224.51
NaC A:Ala3224.07
NaCB A:Ala3223.75
NaCA A:Ala3224.49
NaO A:Pro3232.85
NaN A:Pro3233.83
NaCB A:Pro3234.53
NaCD A:Pro3233.91
NaC A:Pro3233.84
NaCG A:Pro3233.77
NaCA A:Pro3234.21
NaO A:Hoh6652.89
NaO A:Hoh6672.83

interactive model:


Sodium binding site 29 out of 199 in 3fiy


Sodium binding site 29 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 29 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 29 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn388, A: Gly389, A: Ala390, A: Arg407, A: Phe411, A: Trp434, A: Ser435, A: Phe450, A: Gly451, A: Ile452,

conact list:


AtomAtomDistance (A)
NaO A:Asn3885.00
NaO A:Gly3894.85
NaN A:Gly3894.83
NaC A:Gly3893.65
NaCA A:Gly3893.47
NaO A:Ala3903.21
NaN A:Ala3902.91
NaC A:Ala3903.95
NaCB A:Ala3904.78
NaCA A:Ala3903.94
NaCD A:Arg4073.55
NaCZ A:Arg4074.74
NaCG A:Arg4074.09
NaNE A:Arg4073.53
NaCE2 A:Phe4114.52
NaCZ A:Phe4113.47
NaCE1 A:Phe4113.83
NaC A:Trp4343.62
NaCA A:Trp4344.96
NaO A:Trp4342.67
NaN A:Ser4353.95
NaO A:Phe4502.75
NaCB A:Phe4504.56
NaCD2 A:Phe4504.50
NaC A:Phe4503.76
NaCA A:Phe4504.26
NaO A:Gly4514.77
NaN A:Gly4514.84
NaC A:Gly4514.88
NaCG2 A:Ile4524.79

interactive model:


Sodium binding site 30 out of 199 in 3fiy


Sodium binding site 30 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 30 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 30 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr76, A: Ile78, A: Pro79, A: Gly80, A: Lys81, A: Ile82, A: Gly85, A: Na514, A: Na584, A: Hoh669, A: Hoh672,

conact list:


AtomAtomDistance (A)
NaO A:Thr764.38
NaC A:Thr764.94
NaO A:Ile782.75
NaN A:Ile784.98
NaC A:Ile783.81
NaCA A:Ile784.98
NaO A:Pro794.88
NaN A:Pro794.35
NaC A:Pro793.94
NaCA A:Pro793.96
NaO A:Gly804.87
NaN A:Gly803.37
NaC A:Gly803.93
NaCA A:Gly804.11
NaO A:Lys814.98
NaN A:Lys813.21
NaCB A:Lys814.11
NaC A:Lys813.82
NaCA A:Lys813.84
NaO A:Ile823.58
NaN A:Ile822.90
NaCB A:Ile823.68
NaC A:Ile824.10
NaCG1 A:Ile823.81
NaCA A:Ile823.69
NaN A:Gly854.91
NaC A:Gly854.91
NaCA A:Gly854.24
NaNA A:Na5143.02
NaNA A:Na5843.20
NaO A:Hoh6693.71
NaO A:Hoh6724.14

interactive model:


Sodium binding site 31 out of 199 in 3fiy


Sodium binding site 31 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 31 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 31 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg246, A: Asp325, A: Hoh916,

conact list:


AtomAtomDistance (A)
NaCZ A:Arg2464.37
NaNH2 A:Arg2464.24
NaNH1 A:Arg2463.90
NaCB A:Asp3254.76
NaOD2 A:Asp3254.07
NaOD1 A:Asp3252.71
NaCG A:Asp3253.64
NaO A:Hoh9164.57

interactive model:


Sodium binding site 32 out of 199 in 3fiy


Sodium binding site 32 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 32 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 32 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Phe245, A: Arg246, A: Ser249, A: Pro250, A: Ser253, A: Na527,

conact list:


AtomAtomDistance (A)
NaO A:Phe2454.16
NaCE2 A:Phe2453.38
NaCD2 A:Phe2453.57
NaCZ A:Phe2454.43
NaC A:Phe2454.51
NaCG A:Phe2454.73
NaO A:Arg2464.55
NaN A:Arg2464.41
NaCB A:Arg2464.55
NaCD A:Arg2463.26
NaCZ A:Arg2463.94
NaC A:Arg2464.70
NaCG A:Arg2464.44
NaNE A:Arg2464.04
NaNH1 A:Arg2462.97
NaCA A:Arg2463.86
NaN A:Ser2494.80
NaCB A:Ser2494.56
NaOG A:Ser2494.29
NaC A:Ser2494.91
NaCA A:Ser2494.08
NaCD A:Pro2504.85
NaO A:Ser2534.91
NaNA A:Na5273.08

interactive model:


Sodium binding site 33 out of 199 in 3fiy


Sodium binding site 33 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 33 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 33 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu203, A: Pro204, A: Met205, A: Val206, A: Thr258, A: Leu259, A: Asn260, A: Phe288, A: Na10, A: Na519, A: Na532,

conact list:


AtomAtomDistance (A)
NaO A:Glu2034.11
NaN A:Glu2034.37
NaCB A:Glu2034.09
NaC A:Glu2033.36
NaCG A:Glu2034.82
NaCA A:Glu2033.31
NaN A:Pro2043.27
NaCB A:Pro2044.56
NaCD A:Pro2043.25
NaC A:Pro2044.03
NaCG A:Pro2043.63
NaCA A:Pro2044.14
NaN A:Met2053.03
NaCB A:Met2053.29
NaC A:Met2054.75
NaCG A:Met2054.68
NaCA A:Met2053.74
NaN A:Val2064.63
NaO A:Thr2584.61
NaN A:Leu2594.92
NaCB A:Leu2593.97
NaCD2 A:Leu2593.88
NaC A:Leu2594.04
NaCG A:Leu2594.59
NaCA A:Leu2593.68
NaO A:Asn2604.11
NaN A:Asn2603.37
NaCB A:Asn2604.63
NaND2 A:Asn2604.90
NaC A:Asn2604.75
NaOD1 A:Asn2602.79
NaCG A:Asn2603.91
NaCA A:Asn2604.44
NaCE2 A:Phe2884.63
NaCD2 A:Phe2884.38
NaNA A:Na102.96
NaNA A:Na5194.94
NaNA A:Na5324.99

interactive model:


Sodium binding site 34 out of 199 in 3fiy


Sodium binding site 34 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 34 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 34 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr56, A: Lys67, A: Ser70, A: Asp73, A: Asp160, A: Na14, A: Na486, A: Na487, A: Na504, A: Na513,

conact list:


AtomAtomDistance (A)
NaCB A:Tyr564.96
NaCD1 A:Tyr563.44
NaCE1 A:Tyr563.82
NaCG A:Tyr564.57
NaCE A:Lys673.42
NaCD A:Lys674.93
NaNZ A:Lys673.20
NaN A:Ser704.19
NaCB A:Ser703.04
NaOG A:Ser702.58
NaC A:Ser704.98
NaCA A:Ser704.20
NaN A:Asp734.58
NaCB A:Asp734.68
NaOD2 A:Asp733.01
NaOD1 A:Asp733.63
NaCG A:Asp733.52
NaCB A:Asp1604.28
NaOD2 A:Asp1604.89
NaNA A:Na144.24
NaNA A:Na4864.54
NaNA A:Na4874.79
NaNA A:Na5042.84
NaNA A:Na5132.85

interactive model:


Sodium binding site 35 out of 199 in 3fiy


Sodium binding site 35 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 35 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 35 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu182, A: Tyr183, A: His185, A: Ala186, A: Na581,

conact list:


AtomAtomDistance (A)
NaO A:Glu1822.77
NaCB A:Glu1823.93
NaC A:Glu1823.56
NaCG A:Glu1824.74
NaCA A:Glu1823.86
NaN A:Tyr1834.68
NaCB A:His1854.30
NaCD2 A:His1854.25
NaC A:His1854.81
NaCG A:His1854.56
NaN A:Ala1864.00
NaCB A:Ala1863.94
NaCA A:Ala1864.35
NaNA A:Na5813.11

interactive model:


Sodium binding site 36 out of 199 in 3fiy


Sodium binding site 36 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 36 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 36 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Trp119, A: Gln123, A: Trp164, A: Arg179, A: Phe180, A: Glu182, A: Tyr183, A: Na535,

conact list:


AtomAtomDistance (A)
NaCZ2 A:Trp1193.68
NaCE2 A:Trp1194.25
NaNE1 A:Trp1194.08
NaCH2 A:Trp1194.78
NaNE2 A:Gln1233.60
NaOE1 A:Gln1232.73
NaCD A:Gln1233.52
NaCG A:Gln1234.94
NaCZ3 A:Trp1644.79
NaCZ2 A:Trp1643.75
NaCH2 A:Trp1643.54
NaO A:Arg1792.78
NaN A:Arg1794.94
NaCB A:Arg1793.55
NaCD A:Arg1794.06
NaC A:Arg1793.42
NaCG A:Arg1794.38
NaNE A:Arg1794.50
NaCA A:Arg1793.50
NaN A:Phe1804.60
NaCB A:Glu1824.15
NaOE2 A:Glu1823.93
NaCD A:Glu1824.92
NaC A:Glu1824.78
NaCA A:Glu1824.95
NaN A:Tyr1834.12
NaCB A:Tyr1834.25
NaCA A:Tyr1834.58
NaNA A:Na5353.05

interactive model:


Sodium binding site 37 out of 199 in 3fiy


Sodium binding site 37 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 37 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 37 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly68, A: Glu69, A: Pro124, A: Asp125, A: Pro162, A: Gln163, A: Trp164, A: Hoh782, A: Hoh911,

conact list:


AtomAtomDistance (A)
NaC A:Gly684.34
NaCA A:Gly684.48
NaO A:Glu692.85
NaN A:Glu693.88
NaCB A:Glu694.70
NaC A:Glu693.93
NaCA A:Glu694.39
NaO A:Pro1242.89
NaC A:Pro1243.88
NaCA A:Pro1244.72
NaN A:Asp1254.64
NaCA A:Asp1254.62
NaO A:Pro1624.83
NaCB A:Pro1624.02
NaC A:Pro1623.93
NaCA A:Pro1624.17
NaN A:Gln1633.25
NaCB A:Gln1633.82
NaC A:Gln1633.91
NaCG A:Gln1634.98
NaCA A:Gln1633.82
NaN A:Trp1643.15
NaCB A:Trp1643.90
NaCD1 A:Trp1643.46
NaCG A:Trp1644.06
NaCA A:Trp1644.08
NaNE1 A:Trp1644.62
NaO A:Hoh7823.05
NaO A:Hoh9114.14

interactive model:


Sodium binding site 38 out of 199 in 3fiy


Sodium binding site 38 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 38 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 38 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu259, A: Phe261, A: Asn285, A: Glu286, A: Leu287, A: Phe288, A: Leu289, A: Na10, A: Na519,

conact list:


AtomAtomDistance (A)
NaCB A:Leu2594.84
NaCD1 A:Leu2593.78
NaCD2 A:Leu2594.99
NaCG A:Leu2594.76
NaCE2 A:Phe2613.97
NaCD2 A:Phe2614.64
NaCZ A:Phe2614.67
NaO A:Asn2852.83
NaC A:Asn2853.44
NaCA A:Asn2854.45
NaO A:Glu2864.27
NaN A:Glu2863.81
NaC A:Glu2863.69
NaCA A:Glu2863.66
NaN A:Leu2873.70
NaCB A:Leu2874.89
NaC A:Leu2874.16
NaCA A:Leu2874.46
NaO A:Phe2884.90
NaN A:Phe2883.08
NaCB A:Phe2883.46
NaCD2 A:Phe2884.33
NaC A:Phe2883.72
NaCG A:Phe2884.41
NaCA A:Phe2883.54
NaN A:Leu2893.00
NaCB A:Leu2893.88
NaCD1 A:Leu2894.62
NaCG A:Leu2893.91
NaCA A:Leu2894.00
NaNA A:Na103.07
NaNA A:Na5193.52

interactive model:


Sodium binding site 39 out of 199 in 3fiy


Sodium binding site 39 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 39 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 39 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser55, A: Tyr56, A: Lys67, A: Ser70, A: Ala118, A: Asp160, A: Na14, A: Na486, A: Na487, A: Na499, A: Na513,

conact list:


AtomAtomDistance (A)
NaCB A:Ser554.55
NaOG A:Ser554.27
NaC A:Ser554.80
NaN A:Tyr564.32
NaCB A:Tyr564.28
NaCD1 A:Tyr564.26
NaCG A:Tyr564.79
NaCA A:Tyr564.36
NaCE A:Lys673.86
NaNZ A:Lys674.65
NaCB A:Ser704.72
NaOG A:Ser704.70
NaC A:Ala1184.93
NaCB A:Ala1183.36
NaCA A:Ala1184.09
NaO A:Asp1604.75
NaCB A:Asp1603.41
NaOD2 A:Asp1602.62
NaOD1 A:Asp1604.42
NaCG A:Asp1603.32
NaCA A:Asp1604.89
NaNA A:Na143.02
NaNA A:Na4862.89
NaNA A:Na4874.67
NaNA A:Na4992.84
NaNA A:Na5134.45

interactive model:


Sodium binding site 40 out of 199 in 3fiy


Sodium binding site 40 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 40 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 40 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn262, A: Thr263, A: Ile264, A: His281, A: Asn285, A: Na599, A: Hoh877,

conact list:


AtomAtomDistance (A)
NaO A:Asn2624.50
NaO A:Thr2634.93
NaN A:Thr2634.78
NaCB A:Thr2634.35
NaCG2 A:Thr2633.80
NaC A:Thr2633.74
NaCA A:Thr2633.64
NaO A:Ile2643.84
NaN A:Ile2642.89
NaCB A:Ile2643.82
NaC A:Ile2644.29
NaCG1 A:Ile2644.09
NaCA A:Ile2643.79
NaNE2 A:His2814.56
NaCB A:His2814.36
NaND1 A:His2812.89
NaCD2 A:His2814.78
NaCE1 A:His2813.47
NaCG A:His2813.88
NaND2 A:Asn2853.58
NaCG A:Asn2854.77
NaNA A:Na5994.69
NaO A:Hoh8773.13

interactive model:


Sodium binding site 41 out of 199 in 3fiy


Sodium binding site 41 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 41 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 41 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu59, A: Gly60, A: Ala61, A: Glu64, A: Asp89, A: Val90, A: Asp93, A: His96, A: Na516, A: Na541, A: Na643, A: Hoh714, A: Hoh851,

conact list:


AtomAtomDistance (A)
NaO A:Glu594.49
NaO A:Gly604.98
NaN A:Gly604.93
NaC A:Gly603.80
NaCA A:Gly603.72
NaN A:Ala612.96
NaCB A:Ala614.45
NaCA A:Ala613.86
NaOE2 A:Glu644.51
NaO A:Asp893.85
NaC A:Asp894.65
NaO A:Val903.83
NaN A:Val904.62
NaCB A:Val904.05
NaCG2 A:Val904.22
NaC A:Val904.21
NaCG1 A:Val903.72
NaCA A:Val903.61
NaN A:Asp934.95
NaCB A:Asp934.32
NaOD2 A:Asp934.98
NaOD1 A:Asp932.94
NaCG A:Asp933.93
NaCA A:Asp934.19
NaND1 A:His964.68
NaNA A:Na5163.52
NaNA A:Na5413.53
NaNA A:Na6434.90
NaO A:Hoh7144.03
NaO A:Hoh8513.37

interactive model:


Sodium binding site 42 out of 199 in 3fiy


Sodium binding site 42 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 42 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 42 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg449, A: Tyr454, A: Val455, A: Asp456, A: Phe457, A: Glu458, A: Hoh673, A: Hoh734, A: Hoh890,

conact list:


AtomAtomDistance (A)
NaCZ A:Arg4494.20
NaNH2 A:Arg4493.02
NaNH1 A:Arg4494.55
NaOH A:Tyr4544.68
NaO A:Val4553.77
NaC A:Val4554.64
NaO A:Asp4564.95
NaN A:Asp4564.69
NaCB A:Asp4564.71
NaC A:Asp4563.78
NaOD1 A:Asp4564.17
NaCG A:Asp4564.50
NaCA A:Asp4563.72
NaN A:Phe4572.96
NaCB A:Phe4573.75
NaCD1 A:Phe4573.62
NaC A:Phe4574.63
NaCE1 A:Phe4574.67
NaCG A:Phe4574.14
NaCA A:Phe4573.87
NaN A:Glu4584.46
NaO A:Hoh6734.59
NaO A:Hoh7343.17
NaO A:Hoh8903.08

interactive model:


Sodium binding site 43 out of 199 in 3fiy


Sodium binding site 43 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 43 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 43 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile122, A: Gln123, A: Pro124, A: Asp125, A: Ser126, A: Ser127, A: Arg128, A: Gln129, A: Ile130, A: Trp164, A: Na636,

conact list:


AtomAtomDistance (A)
NaO A:Ile1224.93
NaO A:Gln1234.08
NaN A:Gln1234.75
NaCB A:Gln1233.74
NaC A:Gln1233.38
NaCG A:Gln1234.42
NaCA A:Gln1233.39
NaN A:Pro1243.32
NaCB A:Pro1244.76
NaCD A:Pro1243.49
NaC A:Pro1244.01
NaCG A:Pro1243.92
NaCA A:Pro1244.14
NaO A:Asp1252.88
NaN A:Asp1253.01
NaCB A:Asp1254.36
NaOD2 A:Asp1253.27
NaC A:Asp1253.63
NaOD1 A:Asp1254.23
NaCG A:Asp1253.72
NaCA A:Asp1253.75
NaN A:Ser1264.84
NaN A:Ser1274.59
NaCB A:Ser1274.89
NaOG A:Ser1273.74
NaC A:Ser1274.52
NaCA A:Ser1274.95
NaO A:Arg1284.42
NaN A:Arg1283.56
NaC A:Arg1283.64
NaCA A:Arg1283.72
NaO A:Gln1292.79
NaN A:Gln1293.32
NaCB A:Gln1294.55
NaC A:Gln1293.75
NaCA A:Gln1294.03
NaN A:Ile1304.97
NaNE1 A:Trp1644.84
NaNA A:Na6364.04

interactive model:


Sodium binding site 44 out of 199 in 3fiy


Sodium binding site 44 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 44 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 44 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr157, A: Trp159, A: His201, A: Asn202, A: Glu203, A: Pro204, A: Thr207, A: Leu234,

conact list:


AtomAtomDistance (A)
NaO A:Tyr1574.67
NaCE2 A:Tyr1573.70
NaCD2 A:Tyr1573.61
NaCG A:Tyr1574.91
NaCD1 A:Trp1594.08
NaNE1 A:Trp1594.17
NaCB A:His2014.09
NaND1 A:His2013.07
NaC A:His2014.85
NaCE1 A:His2013.97
NaCG A:His2013.96
NaCA A:His2014.78
NaO A:Asn2023.03
NaN A:Asn2024.15
NaC A:Asn2023.94
NaCA A:Asn2024.71
NaO A:Glu2033.90
NaN A:Glu2034.73
NaC A:Glu2033.90
NaCA A:Glu2034.87
NaO A:Pro2044.88
NaN A:Pro2043.68
NaCB A:Pro2044.04
NaCD A:Pro2044.38
NaC A:Pro2044.62
NaCG A:Pro2044.95
NaCA A:Pro2043.44
NaCB A:Thr2073.81
NaCG2 A:Thr2074.49
NaOG1 A:Thr2072.93
NaCD1 A:Leu2344.76
NaCD2 A:Leu2344.41

interactive model:


Sodium binding site 45 out of 199 in 3fiy


Sodium binding site 45 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 45 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 45 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro196, A: Leu197, A: Gly252, A: Ser253, A: Gln254, A: Hoh718, A: Hoh764, A: Hoh875,

conact list:


AtomAtomDistance (A)
NaO A:Pro1962.82
NaCB A:Pro1963.76
NaC A:Pro1963.66
NaCA A:Pro1964.00
NaN A:Leu1974.75
NaCD2 A:Leu1974.03
NaCG A:Leu1974.57
NaO A:Gly2522.98
NaC A:Gly2523.97
NaO A:Ser2534.89
NaN A:Ser2534.46
NaC A:Ser2534.12
NaCA A:Ser2534.09
NaNE2 A:Gln2542.96
NaN A:Gln2543.86
NaOE1 A:Gln2544.83
NaCB A:Gln2543.99
NaCD A:Gln2543.64
NaCG A:Gln2543.39
NaCA A:Gln2544.57
NaO A:Hoh7183.02
NaO A:Hoh7644.08
NaO A:Hoh8753.66

interactive model:


Sodium binding site 46 out of 199 in 3fiy


Sodium binding site 46 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 46 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 46 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln243, A: Ala244, A: Arg246, A: Ala247, A: Hoh843,

conact list:


AtomAtomDistance (A)
NaO A:Gln2432.80
NaCB A:Gln2433.79
NaC A:Gln2433.56
NaCG A:Gln2434.53
NaCA A:Gln2433.68
NaN A:Ala2444.77
NaCB A:Arg2464.03
NaC A:Arg2464.48
NaCA A:Arg2464.77
NaN A:Ala2473.82
NaCB A:Ala2473.98
NaCA A:Ala2474.21
NaO A:Hoh8434.34

interactive model:


Sodium binding site 47 out of 199 in 3fiy


Sodium binding site 47 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 47 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 47 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser282, A: Glu286, A: Glu290, A: Asn298, A: Tyr378, A: Na582, A: Hoh736, A: Hoh741, A: Hoh804,

conact list:


AtomAtomDistance (A)
NaO A:Ser2824.87
NaCB A:Ser2824.94
NaOG A:Ser2824.94
NaO A:Glu2864.57
NaOE1 A:Glu2862.81
NaCB A:Glu2863.60
NaOE2 A:Glu2864.76
NaCD A:Glu2863.78
NaCG A:Glu2864.28
NaCA A:Glu2864.90
NaOE1 A:Glu2904.30
NaCB A:Glu2903.81
NaOE2 A:Glu2903.02
NaCD A:Glu2903.51
NaCG A:Glu2903.84
NaCA A:Glu2904.89
NaCB A:Asn2983.45
NaND2 A:Asn2983.11
NaOD1 A:Asn2984.98
NaCG A:Asn2983.77
NaCA A:Asn2984.79
NaCZ A:Tyr3784.90
NaOH A:Tyr3783.59
NaNA A:Na5823.81
NaO A:Hoh7363.08
NaO A:Hoh7414.09
NaO A:Hoh8044.03

interactive model:


Sodium binding site 48 out of 199 in 3fiy


Sodium binding site 48 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 48 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 48 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr56, A: Gly60, A: Trp62, A: Lys67, A: Asp73, A: Gly88, A: Na13, A: Na486, A: Na487, A: Na499, A: Na504, A: Na518,

conact list:


AtomAtomDistance (A)
NaCD1 A:Tyr563.75
NaCZ A:Tyr564.82
NaCE1 A:Tyr563.58
NaO A:Gly604.78
NaN A:Trp624.46
NaCB A:Trp623.09
NaC A:Trp624.21
NaCE3 A:Trp624.90
NaCG A:Trp624.41
NaCA A:Trp623.40
NaO A:Trp624.00
NaCE A:Lys673.29
NaCD A:Lys674.33
NaNZ A:Lys673.10
NaCB A:Asp734.84
NaOD2 A:Asp733.41
NaOD1 A:Asp732.65
NaCG A:Asp733.40
NaO A:Gly884.71
NaNA A:Na134.86
NaNA A:Na4864.25
NaNA A:Na4872.90
NaNA A:Na4992.85
NaNA A:Na5044.45
NaNA A:Na5184.02

interactive model:


Sodium binding site 49 out of 199 in 3fiy


Sodium binding site 49 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 49 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 49 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr76, A: Arg77, A: Ile78, A: Ile82, A: Gly85, A: Asp86, A: Ser87, A: Na495, A: Na603, A: Hoh669, A: Hoh672,

conact list:


AtomAtomDistance (A)
NaO A:Thr762.67
NaCB A:Thr764.23
NaC A:Thr763.67
NaCA A:Thr764.09
NaN A:Arg774.81
NaO A:Ile784.79
NaO A:Ile824.70
NaN A:Ile824.76
NaCB A:Ile823.64
NaCG2 A:Ile824.51
NaCG1 A:Ile823.72
NaCA A:Ile824.71
NaO A:Gly853.10
NaN A:Gly854.64
NaC A:Gly853.13
NaCA A:Gly853.49
NaO A:Asp862.69
NaN A:Asp863.66
NaC A:Asp863.59
NaCA A:Asp864.21
NaN A:Ser874.54
NaCB A:Ser874.67
NaCA A:Ser874.83
NaNA A:Na4953.02
NaNA A:Na6034.15
NaO A:Hoh6694.67
NaO A:Hoh6723.05

interactive model:


Sodium binding site 50 out of 199 in 3fiy


Sodium binding site 50 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 50 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 50 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro334, A: Met335, A: Arg336, A: Val348, A: Val349, A: Gln350, A: Val351, A: Na529, A: Na550, A: Hoh700,

conact list:


AtomAtomDistance (A)
NaO A:Pro3344.35
NaC A:Pro3344.91
NaO A:Met3354.94
NaN A:Met3354.65
NaCB A:Met3354.28
NaC A:Met3353.73
NaCG A:Met3354.34
NaCA A:Met3353.55
NaO A:Arg3363.78
NaN A:Arg3362.95
NaCB A:Arg3364.05
NaC A:Arg3364.31
NaCG A:Arg3364.42
NaCA A:Arg3363.93
NaCB A:Val3484.91
NaC A:Val3484.91
NaCG1 A:Val3483.49
NaO A:Val3492.79
NaN A:Val3494.37
NaC A:Val3493.74
NaCA A:Val3494.67
NaN A:Gln3504.46
NaOE1 A:Gln3504.75
NaC A:Gln3504.97
NaCA A:Gln3504.42
NaN A:Val3514.94
NaCG2 A:Val3514.75
NaNA A:Na5293.08
NaNA A:Na5504.62
NaO A:Hoh7002.89

interactive model:


Sodium binding site 51 out of 199 in 3fiy


Sodium binding site 51 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 51 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 51 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu59, A: Gly60, A: Ala61, A: Asp93, A: His94, A: Tyr95, A: His96, A: Arg97, A: Na506, A: Hoh714,

conact list:


AtomAtomDistance (A)
NaO A:Glu592.88
NaC A:Glu594.09
NaO A:Gly604.84
NaN A:Gly604.78
NaC A:Gly604.19
NaCA A:Gly604.43
NaN A:Ala613.82
NaCB A:Ala613.65
NaCA A:Ala614.31
NaO A:Asp933.37
NaN A:Asp934.68
NaCB A:Asp934.15
NaOD2 A:Asp934.54
NaC A:Asp933.34
NaOD1 A:Asp932.78
NaCG A:Asp933.63
NaCA A:Asp933.45
NaN A:His943.94
NaC A:His944.21
NaCA A:His944.66
NaO A:Tyr954.89
NaN A:Tyr953.35
NaCB A:Tyr953.23
NaCD2 A:Tyr954.42
NaC A:Tyr953.74
NaCG A:Tyr954.32
NaCA A:Tyr953.63
NaNE2 A:His964.87
NaN A:His963.02
NaCB A:His963.63
NaND1 A:His963.11
NaCD2 A:His964.68
NaCE1 A:His964.03
NaCG A:His963.62
NaCA A:His963.93
NaN A:Arg974.98
NaNA A:Na5063.52
NaO A:Hoh7144.72

interactive model:


Sodium binding site 52 out of 199 in 3fiy


Sodium binding site 52 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 52 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 52 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu102, A: Asp103, A: Arg106, A: Arg148, A: Na608,

conact list:


AtomAtomDistance (A)
NaO A:Leu1024.55
NaC A:Leu1024.57
NaO A:Asp1034.86
NaN A:Asp1034.09
NaCB A:Asp1033.46
NaOD2 A:Asp1032.72
NaC A:Asp1034.69
NaOD1 A:Asp1034.72
NaCG A:Asp1033.51
NaCA A:Asp1033.46
NaCB A:Arg1064.35
NaCD A:Arg1063.62
NaCZ A:Arg1064.54
NaCG A:Arg1064.63
NaNE A:Arg1063.38
NaNH1 A:Arg1064.90
NaCD A:Arg1483.67
NaCZ A:Arg1483.65
NaCG A:Arg1484.29
NaNE A:Arg1482.85
NaNH2 A:Arg1483.65
NaNH1 A:Arg1484.88
NaNA A:Na6083.66

interactive model:


Sodium binding site 53 out of 199 in 3fiy


Sodium binding site 53 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 53 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 53 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr56, A: Trp62, A: Trp72, A: Asp73, A: Thr76, A: Ser87, A: Gly88, A: Asp89, A: Na513, A: Na547, A: Hoh676,

conact list:


AtomAtomDistance (A)
NaCE2 A:Tyr564.83
NaCD1 A:Tyr564.72
NaCZ A:Tyr563.51
NaCE1 A:Tyr563.43
NaOH A:Tyr562.74
NaCB A:Trp624.01
NaCD1 A:Trp624.97
NaCD2 A:Trp624.55
NaCE3 A:Trp624.71
NaCG A:Trp624.27
NaC A:Trp725.00
NaO A:Trp724.73
NaO A:Asp734.63
NaN A:Asp734.60
NaCB A:Asp734.16
NaOD2 A:Asp734.89
NaC A:Asp734.72
NaOD1 A:Asp732.71
NaCG A:Asp733.79
NaCA A:Asp733.76
NaOG1 A:Thr763.84
NaCB A:Ser874.54
NaOG A:Ser874.56
NaC A:Ser874.95
NaO A:Gly884.10
NaN A:Gly883.91
NaC A:Gly883.69
NaCA A:Gly884.16
NaN A:Asp893.51
NaCB A:Asp894.50
NaOD2 A:Asp894.91
NaOD1 A:Asp892.73
NaCG A:Asp893.91
NaCA A:Asp893.86
NaNA A:Na5134.02
NaNA A:Na5473.45
NaO A:Hoh6764.09

interactive model:


Sodium binding site 54 out of 199 in 3fiy


Sodium binding site 54 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 54 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 54 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Met205, A: Asn260, A: Phe283, A: Gln284, A: Asn285, A: Glu286, A: Leu287, A: Phe288, A: Na10, A: Na498, A: Na503, A: Na532,

conact list:


AtomAtomDistance (A)
NaCB A:Met2053.77
NaCE A:Met2053.81
NaCG A:Met2053.56
NaSD A:Met2053.27
NaCA A:Met2054.94
NaO A:Asn2604.98
NaO A:Phe2833.63
NaC A:Phe2834.71
NaO A:Gln2842.83
NaC A:Gln2843.63
NaCA A:Gln2844.48
NaO A:Asn2854.64
NaN A:Asn2854.28
NaC A:Asn2854.30
NaCA A:Asn2854.33
NaN A:Glu2864.50
NaC A:Glu2864.87
NaN A:Leu2873.88
NaCB A:Leu2873.43
NaCD2 A:Leu2874.87
NaC A:Leu2874.67
NaCG A:Leu2874.19
NaCA A:Leu2874.19
NaN A:Phe2884.14
NaCB A:Phe2884.85
NaCE2 A:Phe2884.12
NaCD2 A:Phe2883.57
NaCG A:Phe2884.65
NaNA A:Na102.99
NaNA A:Na4984.94
NaNA A:Na5033.52
NaNA A:Na5323.93

interactive model:


Sodium binding site 55 out of 199 in 3fiy


Sodium binding site 55 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 55 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 55 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Phe217, A: Glu441, A: Trp442, A: Ala443, A: Glu444, A: Na633, A: Hoh703, A: Hoh845,

conact list:


AtomAtomDistance (A)
NaCD1 A:Phe2174.71
NaCZ A:Phe2173.65
NaCE1 A:Phe2173.44
NaO A:Glu4413.52
NaOE2 A:Glu4414.91
NaC A:Glu4414.48
NaCG A:Glu4414.98
NaN A:Trp4424.87
NaCB A:Trp4423.74
NaC A:Trp4423.95
NaCG A:Trp4424.86
NaCA A:Trp4424.35
NaO A:Trp4424.88
NaO A:Ala4434.90
NaN A:Ala4433.05
NaC A:Ala4433.81
NaCB A:Ala4433.28
NaCA A:Ala4433.50
NaN A:Glu4443.38
NaCB A:Glu4444.29
NaOE2 A:Glu4444.59
NaCD A:Glu4444.70
NaCG A:Glu4443.75
NaCA A:Glu4444.41
NaNA A:Na6333.18
NaO A:Hoh7033.08
NaO A:Hoh8453.69

interactive model:


Sodium binding site 56 out of 199 in 3fiy


Sodium binding site 56 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 56 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 56 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp438, A: Asn439, A: Gly445, A: Tyr446, A: Lys448, A: Arg449, A: Phe457, A: Na491, A: Hoh673,

conact list:


AtomAtomDistance (A)
NaO A:Asp4384.86
NaCB A:Asp4383.78
NaC A:Asp4384.06
NaCG A:Asp4384.58
NaCA A:Asp4384.27
NaO A:Asn4392.89
NaN A:Asn4393.50
NaC A:Asn4393.83
NaCA A:Asn4394.13
NaO A:Gly4454.97
NaO A:Tyr4463.90
NaCB A:Tyr4464.37
NaCD1 A:Tyr4464.22
NaC A:Tyr4464.19
NaCG A:Tyr4464.81
NaCA A:Tyr4464.05
NaO A:Lys4482.87
NaN A:Lys4484.69
NaC A:Lys4483.72
NaCA A:Lys4484.86
NaN A:Arg4494.17
NaCB A:Arg4494.28
NaCD A:Arg4494.85
NaCZ A:Arg4494.91
NaCG A:Arg4493.63
NaNH1 A:Arg4494.60
NaCA A:Arg4493.89
NaCD1 A:Phe4574.67
NaCZ A:Phe4573.79
NaCE1 A:Phe4573.51
NaNA A:Na4913.44
NaO A:Hoh6733.07

interactive model:


Sodium binding site 57 out of 199 in 3fiy


Sodium binding site 57 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 57 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 57 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro44, A: Gly46, A: Phe47, A: Leu48, A: Trp49, A: Lys111, A: Ile475, A: Asn478, A: Na589, A: Hoh697,

conact list:


AtomAtomDistance (A)
NaO A:Pro444.49
NaO A:Gly464.99
NaN A:Gly464.31
NaC A:Gly464.27
NaCA A:Gly464.64
NaO A:Phe472.79
NaN A:Phe473.68
NaCB A:Phe473.99
NaC A:Phe473.75
NaCA A:Phe474.03
NaN A:Leu484.97
NaCD1 A:Trp493.50
NaCG A:Trp494.77
NaCE2 A:Trp494.97
NaNE1 A:Trp493.65
NaCE A:Lys1114.04
NaCD A:Lys1114.81
NaCG A:Lys1114.56
NaNZ A:Lys1114.94
NaO A:Ile4754.96
NaCB A:Asn4784.42
NaND2 A:Asn4784.02
NaOD1 A:Asn4782.84
NaCG A:Asn4783.51
NaCA A:Asn4784.97
NaNA A:Na5893.24
NaO A:Hoh6973.04

interactive model:


Sodium binding site 58 out of 199 in 3fiy


Sodium binding site 58 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 58 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 58 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile71, A: Trp72, A: Arg74, A: Phe75, A: Ala218, A: Pro219, A: Gly220, A: Na593, A: Hoh871,

conact list:


AtomAtomDistance (A)
NaO A:Ile712.84
NaCB A:Ile713.75
NaCG2 A:Ile714.62
NaC A:Ile713.72
NaCG1 A:Ile714.69
NaCA A:Ile714.00
NaN A:Trp724.89
NaCB A:Arg744.48
NaC A:Arg744.74
NaN A:Phe753.87
NaCB A:Phe753.60
NaCD1 A:Phe753.68
NaCE1 A:Phe754.77
NaCG A:Phe754.06
NaCA A:Phe753.97
NaC A:Ala2184.62
NaCB A:Ala2183.44
NaCA A:Ala2183.89
NaO A:Pro2193.96
NaN A:Pro2194.34
NaCB A:Pro2194.12
NaC A:Pro2193.91
NaCA A:Pro2193.39
NaN A:Gly2204.86
NaNA A:Na5933.15
NaO A:Hoh8713.22

interactive model:


Sodium binding site 59 out of 199 in 3fiy


Sodium binding site 59 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 59 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 59 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile312, A: Ala313, A: Pro314, A: Glu315, A: Asp316, A: Met317, A: Gln318, A: Na564, A: Hoh737,

conact list:


AtomAtomDistance (A)
NaCB A:Ile3124.94
NaCG2 A:Ile3123.48
NaO A:Ala3132.80
NaN A:Ala3134.97
NaC A:Ala3133.94
NaO A:Pro3143.17
NaN A:Pro3144.49
NaC A:Pro3143.55
NaCA A:Pro3144.15
NaO A:Glu3154.74
NaN A:Glu3154.13
NaC A:Glu3154.04
NaCA A:Glu3154.42
NaN A:Asp3163.49
NaCB A:Asp3163.97
NaC A:Asp3163.92
NaCA A:Asp3163.92
NaN A:Met3173.01
NaCB A:Met3173.56
NaC A:Met3174.88
NaCG A:Met3173.36
NaSD A:Met3174.56
NaCA A:Met3173.87
NaN A:Gln3184.77
NaNA A:Na5643.22
NaO A:Hoh7372.98

interactive model:


Sodium binding site 60 out of 199 in 3fiy


Sodium binding site 60 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 60 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 60 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His96, A: Arg97, A: Tyr98, A: Glu99, A: Gln100, A: Na602, A: Hoh706, A: Hoh838,

conact list:


AtomAtomDistance (A)
NaO A:His962.89
NaC A:His963.80
NaCA A:His964.97
NaO A:Arg974.32
NaN A:Arg974.23
NaC A:Arg973.73
NaCA A:Arg973.88
NaN A:Tyr983.60
NaCB A:Tyr984.74
NaCE2 A:Tyr984.79
NaCD1 A:Tyr983.39
NaCD2 A:Tyr984.71
NaCZ A:Tyr984.23
NaC A:Tyr984.12
NaCE1 A:Tyr983.49
NaCG A:Tyr984.07
NaOH A:Tyr984.92
NaCA A:Tyr984.27
NaN A:Glu993.11
NaOE1 A:Glu994.04
NaCB A:Glu993.39
NaCD A:Glu994.23
NaC A:Glu994.77
NaCG A:Glu993.42
NaCA A:Glu993.83
NaN A:Gln1004.62
NaNA A:Na6023.13
NaO A:Hoh7064.99
NaO A:Hoh8384.00

interactive model:


Sodium binding site 61 out of 199 in 3fiy


Sodium binding site 61 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 61 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 61 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile71, A: Tyr157, A: Trp159, A: Trp171, A: Thr207, A: Ala218, A: Na536, A: Na568,

conact list:


AtomAtomDistance (A)
NaCD1 A:Ile714.45
NaCE2 A:Tyr1573.57
NaCD2 A:Tyr1574.87
NaCZ A:Tyr1573.54
NaCE1 A:Tyr1574.80
NaOH A:Tyr1572.74
NaN A:Trp1594.51
NaCB A:Trp1593.60
NaCD1 A:Trp1594.11
NaCD2 A:Trp1594.95
NaC A:Trp1593.87
NaCG A:Trp1593.98
NaCA A:Trp1593.42
NaO A:Trp1593.43
NaCD1 A:Trp1714.96
NaNE1 A:Trp1714.58
NaCB A:Thr2074.00
NaCG2 A:Thr2073.54
NaOG1 A:Thr2073.37
NaCA A:Thr2074.60
NaO A:Ala2184.43
NaNA A:Na5363.18
NaNA A:Na5683.75

interactive model:


Sodium binding site 62 out of 199 in 3fiy


Sodium binding site 62 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 62 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 62 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Phe245, A: Ser249, A: Pro250, A: Ala251, A: Ser253, A: Gln254, A: Na497, A: Na638, A: Na663,

conact list:


AtomAtomDistance (A)
NaCE2 A:Phe2453.96
NaCD2 A:Phe2454.93
NaCZ A:Phe2454.09
NaO A:Ser2494.35
NaCB A:Ser2494.80
NaOG A:Ser2494.23
NaC A:Ser2493.85
NaCA A:Ser2494.08
NaO A:Pro2502.77
NaN A:Pro2503.76
NaCB A:Pro2504.84
NaCD A:Pro2503.99
NaC A:Pro2503.80
NaCG A:Pro2504.11
NaCA A:Pro2504.31
NaN A:Ala2514.91
NaO A:Ser2532.90
NaN A:Ser2534.14
NaCB A:Ser2534.46
NaC A:Ser2533.89
NaCA A:Ser2534.36
NaN A:Gln2544.98
NaNA A:Na4973.08
NaNA A:Na6384.14
NaNA A:Na6633.98

interactive model:


Sodium binding site 63 out of 199 in 3fiy


Sodium binding site 63 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 63 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 63 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg174, A: His232, A: His233, A: Phe311, A: Ile312, A: Asp316,

conact list:


AtomAtomDistance (A)
NaCB A:Arg1743.67
NaCD A:Arg1743.50
NaCZ A:Arg1744.02
NaCG A:Arg1743.54
NaNE A:Arg1744.21
NaNH2 A:Arg1742.98
NaCA A:Arg1744.68
NaNE2 A:His2324.77
NaCD2 A:His2324.28
NaNE2 A:His2332.91
NaCD2 A:His2333.64
NaCE1 A:His2334.01
NaCG A:His2334.90
NaO A:Phe3112.79
NaCB A:Phe3113.72
NaCD2 A:Phe3114.43
NaC A:Phe3113.65
NaCG A:Phe3114.59
NaCA A:Phe3113.80
NaN A:Ile3124.91
NaOD2 A:Asp3164.73

interactive model:


Sodium binding site 64 out of 199 in 3fiy


Sodium binding site 64 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 64 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 64 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn333, A: Pro334, A: Met335, A: Arg336, A: Val349, A: Val351, A: Glu361, A: Na515, A: Na550, A: Hoh700,

conact list:


AtomAtomDistance (A)
NaND2 A:Asn3334.78
NaO A:Pro3342.88
NaN A:Pro3344.70
NaCB A:Pro3344.80
NaCD A:Pro3344.48
NaC A:Pro3343.64
NaCG A:Pro3344.02
NaCA A:Pro3344.65
NaN A:Met3354.15
NaC A:Met3354.50
NaCA A:Met3354.02
NaN A:Arg3364.25
NaCB A:Arg3364.94
NaCD A:Arg3364.71
NaCG A:Arg3364.26
NaNE A:Arg3364.60
NaO A:Val3494.93
NaCB A:Val3514.39
NaCG2 A:Val3513.73
NaN A:Glu3614.64
NaOE1 A:Glu3614.88
NaCB A:Glu3613.41
NaOE2 A:Glu3612.71
NaCD A:Glu3613.78
NaCG A:Glu3614.19
NaCA A:Glu3614.64
NaNA A:Na5153.08
NaNA A:Na5503.06
NaO A:Hoh7004.32

interactive model:


Sodium binding site 65 out of 199 in 3fiy


Sodium binding site 65 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 65 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 65 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr454, A: Val455, A: Asp456, A: Gln461, A: Arg462, A: Thr463, A: Hoh824,

conact list:


AtomAtomDistance (A)
NaO A:Tyr4543.60
NaCB A:Tyr4544.62
NaCD1 A:Tyr4543.35
NaC A:Tyr4544.20
NaCE1 A:Tyr4543.96
NaCG A:Tyr4544.42
NaN A:Val4554.65
NaC A:Val4554.55
NaCA A:Val4554.56
NaN A:Asp4563.96
NaCB A:Asp4564.19
NaCA A:Asp4564.64
NaO A:Gln4612.87
NaOE1 A:Gln4614.73
NaCB A:Gln4613.94
NaCD A:Gln4614.39
NaC A:Gln4613.41
NaCG A:Gln4613.16
NaCA A:Gln4614.30
NaO A:Arg4624.35
NaN A:Arg4623.91
NaC A:Arg4623.74
NaCA A:Arg4623.94
NaN A:Thr4633.56
NaCB A:Thr4633.51
NaCG2 A:Thr4634.84
NaOG1 A:Thr4632.84
NaCA A:Thr4634.16
NaO A:Hoh8243.05

interactive model:


Sodium binding site 66 out of 199 in 3fiy


Sodium binding site 66 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 66 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 66 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Val165, A: Glu168, A: Gly169, A: Gly170, A: Ser173, A: Glu175, A: Ser176, A: Arg179, A: Na540, A: Hoh748,

conact list:


AtomAtomDistance (A)
NaO A:Val1654.54
NaCG1 A:Val1654.87
NaO A:Glu1682.89
NaOE1 A:Glu1684.89
NaCB A:Glu1684.02
NaC A:Glu1683.80
NaCA A:Glu1684.55
NaN A:Gly1694.64
NaC A:Gly1694.99
NaCA A:Gly1694.76
NaO A:Gly1704.35
NaN A:Gly1704.62
NaO A:Ser1734.47
NaCB A:Ser1733.44
NaOG A:Ser1733.16
NaC A:Ser1734.72
NaCA A:Ser1734.68
NaO A:Glu1754.19
NaN A:Glu1754.43
NaCB A:Glu1753.62
NaC A:Glu1753.59
NaCG A:Glu1754.99
NaCA A:Glu1754.06
NaN A:Ser1763.18
NaCB A:Ser1763.72
NaOG A:Ser1762.79
NaCA A:Ser1763.58
NaCG A:Arg1794.64
NaNA A:Na5403.10
NaO A:Hoh7484.70

interactive model:


Sodium binding site 67 out of 199 in 3fiy


Sodium binding site 67 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 67 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 67 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Met205, A: Asn260, A: Phe261, A: Asn262, A: Gln284, A: Asn285, A: Na10, A: Na498, A: Na519, A: Na598,

conact list:


AtomAtomDistance (A)
NaCB A:Met2054.02
NaCE A:Met2054.98
NaCG A:Met2053.70
NaSD A:Met2054.93
NaO A:Asn2602.90
NaCB A:Asn2604.81
NaND2 A:Asn2603.53
NaC A:Asn2603.69
NaOD1 A:Asn2604.01
NaCG A:Asn2603.88
NaCA A:Asn2604.77
NaN A:Phe2614.16
NaC A:Phe2614.63
NaCA A:Phe2613.96
NaN A:Asn2624.71
NaND2 A:Asn2624.43
NaO A:Gln2842.83
NaNE2 A:Gln2843.92
NaOE1 A:Gln2844.60
NaCB A:Gln2844.99
NaCD A:Gln2844.01
NaC A:Gln2843.94
NaCG A:Gln2844.07
NaCA A:Gln2844.70
NaN A:Asn2854.87
NaOD1 A:Asn2854.30
NaCA A:Asn2854.91
NaNA A:Na103.90
NaNA A:Na4984.99
NaNA A:Na5193.93
NaNA A:Na5983.24

interactive model:


Sodium binding site 68 out of 199 in 3fiy


Sodium binding site 68 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 68 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 68 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Lys380, A: Leu381, A: Pro382, A: Asp427, A: Hoh711, A: Hoh719,

conact list:


AtomAtomDistance (A)
NaO A:Lys3802.81
NaC A:Lys3803.87
NaCG A:Lys3804.59
NaO A:Leu3814.52
NaN A:Leu3814.35
NaC A:Leu3813.84
NaCA A:Leu3813.85
NaN A:Pro3823.69
NaCB A:Pro3824.71
NaCD A:Pro3823.52
NaCG A:Pro3823.67
NaCA A:Pro3824.43
NaCB A:Asp4273.96
NaOD2 A:Asp4272.81
NaOD1 A:Asp4274.66
NaCG A:Asp4273.64
NaO A:Hoh7113.11
NaO A:Hoh7194.75

interactive model:


Sodium binding site 69 out of 199 in 3fiy


Sodium binding site 69 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 69 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 69 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Phe75, A: Lys81, A: Gly215, A: Leu216, A: Phe217, A: Ala443, A: Hoh693, A: Hoh801, A: Hoh896,

conact list:


AtomAtomDistance (A)
NaCE2 A:Phe754.30
NaCZ A:Phe754.28
NaO A:Lys812.85
NaCB A:Lys814.20
NaCE A:Lys814.90
NaCD A:Lys813.76
NaC A:Lys813.74
NaCG A:Lys814.63
NaCA A:Lys813.89
NaNZ A:Lys814.83
NaO A:Gly2154.54
NaO A:Leu2162.87
NaN A:Leu2164.96
NaCB A:Leu2164.45
NaCD2 A:Leu2163.24
NaC A:Leu2163.69
NaCG A:Leu2164.24
NaCA A:Leu2163.78
NaN A:Phe2174.97
NaCB A:Ala4433.98
NaO A:Hoh6934.85
NaO A:Hoh8014.35
NaO A:Hoh8963.12

interactive model:


Sodium binding site 70 out of 199 in 3fiy


Sodium binding site 70 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 70 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 70 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln123, A: Arg128, A: Trp164, A: Arg179, A: Glu182, A: Na501, A: Na581, A: Hoh666,

conact list:


AtomAtomDistance (A)
NaNE2 A:Gln1233.05
NaOE1 A:Gln1234.16
NaCD A:Gln1234.03
NaO A:Arg1284.38
NaCB A:Arg1283.52
NaCD A:Arg1283.65
NaC A:Arg1284.94
NaCG A:Arg1283.67
NaNE A:Arg1284.69
NaCA A:Arg1284.52
NaCH2 A:Trp1644.83
NaO A:Arg1794.89
NaCD A:Arg1794.79
NaNE A:Arg1794.59
NaOE1 A:Glu1824.73
NaCB A:Glu1823.54
NaOE2 A:Glu1822.76
NaCD A:Glu1823.72
NaCG A:Glu1824.17
NaCA A:Glu1824.87
NaNA A:Na5013.05
NaNA A:Na5813.15
NaO A:Hoh6663.75

interactive model:


Sodium binding site 71 out of 199 in 3fiy


Sodium binding site 71 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 71 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 71 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile71, A: Trp72, A: Trp159, A: Phe217, A: Ala218, A: Pro219, A: Na526, A: Na568,

conact list:


AtomAtomDistance (A)
NaCD1 A:Ile714.59
NaCD1 A:Trp723.96
NaCD2 A:Trp724.96
NaCZ2 A:Trp723.87
NaCE2 A:Trp723.70
NaNE1 A:Trp722.90
NaCB A:Trp1593.75
NaCD2 A:Trp1594.46
NaC A:Trp1594.71
NaCE3 A:Trp1594.42
NaCG A:Trp1594.23
NaCA A:Trp1594.59
NaO A:Trp1594.02
NaCB A:Phe2173.73
NaCD2 A:Phe2174.57
NaC A:Phe2174.33
NaCG A:Phe2174.56
NaCA A:Phe2174.66
NaO A:Ala2182.83
NaN A:Ala2183.78
NaC A:Ala2183.77
NaCB A:Ala2184.10
NaCA A:Ala2184.12
NaN A:Pro2194.93
NaNA A:Na5263.18
NaNA A:Na5683.12

interactive model:


Sodium binding site 72 out of 199 in 3fiy


Sodium binding site 72 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 72 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 72 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Trp62, A: Asn63, A: Lys67, A: Gly68, A: Glu69, A: Asp73, A: Hoh670, A: Hoh780, A: Hoh911,

conact list:


AtomAtomDistance (A)
NaCD2 A:Trp624.70
NaC A:Trp623.89
NaCE3 A:Trp623.73
NaCZ3 A:Trp623.84
NaO A:Trp622.92
NaCH2 A:Trp624.86
NaN A:Asn634.20
NaCB A:Asn633.87
NaC A:Asn634.71
NaCA A:Asn633.59
NaO A:Lys672.96
NaCB A:Lys674.82
NaC A:Lys673.80
NaCG A:Lys674.60
NaCA A:Lys674.91
NaNZ A:Lys674.01
NaO A:Gly683.48
NaN A:Gly684.26
NaC A:Gly683.37
NaCA A:Gly683.95
NaN A:Glu693.50
NaCB A:Glu694.40
NaCA A:Glu693.82
NaOD2 A:Asp734.51
NaO A:Hoh6702.94
NaO A:Hoh7804.24
NaO A:Hoh9114.87

interactive model:


Sodium binding site 73 out of 199 in 3fiy


Sodium binding site 73 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 73 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 73 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr225, A: Leu226, A: Gly227, A: Gly228, A: Arg229, A: Tyr305, A: Asn307, A: Leu308, A: Phe311, A: Na614, A: Hoh717,

conact list:


AtomAtomDistance (A)
NaO A:Thr2252.82
NaC A:Thr2253.83
NaCA A:Thr2254.99
NaO A:Leu2263.85
NaN A:Leu2264.35
NaC A:Leu2263.75
NaCA A:Leu2264.02
NaN A:Gly2274.09
NaC A:Gly2274.14
NaCA A:Gly2274.64
NaO A:Gly2284.77
NaN A:Gly2283.14
NaC A:Gly2283.59
NaCA A:Gly2283.39
NaN A:Arg2292.91
NaCB A:Arg2293.78
NaCA A:Arg2293.90
NaCB A:Tyr3054.13
NaCD2 A:Tyr3054.24
NaCG A:Tyr3054.39
NaND2 A:Asn3073.01
NaOD1 A:Asn3073.95
NaCG A:Asn3073.90
NaN A:Leu3084.99
NaCE1 A:Phe3114.55
NaNA A:Na6143.82
NaO A:Hoh7173.27

interactive model:


Sodium binding site 74 out of 199 in 3fiy


Sodium binding site 74 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 74 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 74 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Lys41, A: Lys42, A: Phe43, A: Arg419, A: Gly479, A: Leu480, A: Hoh686, A: Hoh822,

conact list:


AtomAtomDistance (A)
NaO A:Lys412.88
NaCB A:Lys414.62
NaCE A:Lys414.46
NaCD A:Lys413.84
NaC A:Lys413.90
NaCG A:Lys413.51
NaCA A:Lys414.56
NaN A:Lys424.86
NaCD1 A:Phe433.92
NaCZ A:Phe434.54
NaCE1 A:Phe433.44
NaCB A:Arg4194.42
NaCD A:Arg4194.43
NaCG A:Arg4194.16
NaNE A:Arg4194.97
NaO A:Gly4794.91
NaN A:Gly4794.96
NaC A:Gly4793.71
NaCA A:Gly4793.55
NaO A:Leu4804.56
NaN A:Leu4802.91
NaCB A:Leu4803.67
NaCD1 A:Leu4804.21
NaCD2 A:Leu4804.91
NaC A:Leu4804.72
NaCG A:Leu4803.64
NaCA A:Leu4803.86
NaO A:Hoh6863.00
NaO A:Hoh8223.86

interactive model:


Sodium binding site 75 out of 199 in 3fiy


Sodium binding site 75 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 75 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 75 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg128, A: Glu168, A: Glu175, A: Ser176, A: Arg179, A: Na531, A: Hoh748,

conact list:


AtomAtomDistance (A)
NaCZ A:Arg1284.48
NaNH2 A:Arg1283.51
NaO A:Glu1684.66
NaOE1 A:Glu1682.74
NaCB A:Glu1683.92
NaOE2 A:Glu1684.93
NaCD A:Glu1683.90
NaCG A:Glu1684.45
NaO A:Glu1754.29
NaCB A:Glu1753.90
NaOE2 A:Glu1754.89
NaC A:Glu1754.46
NaCG A:Glu1754.76
NaCA A:Glu1754.87
NaN A:Ser1764.88
NaCB A:Arg1794.86
NaCD A:Arg1793.47
NaCZ A:Arg1793.94
NaCG A:Arg1793.35
NaNE A:Arg1794.15
NaNH1 A:Arg1792.88
NaNA A:Na5313.10
NaO A:Hoh7482.92

interactive model:


Sodium binding site 76 out of 199 in 3fiy


Sodium binding site 76 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 76 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 76 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ala61, A: Trp62, A: Glu64, A: Asp89, A: Val90, A: Na506, A: Na643, A: Hoh682, A: Hoh791, A: Hoh851,

conact list:


AtomAtomDistance (A)
NaN A:Ala614.25
NaCA A:Ala614.65
NaN A:Trp624.74
NaCD1 A:Trp623.91
NaNE1 A:Trp624.47
NaOE2 A:Glu644.70
NaO A:Asp892.83
NaCB A:Asp894.35
NaC A:Asp893.52
NaCA A:Asp894.44
NaN A:Val904.06
NaCB A:Val904.27
NaCG2 A:Val903.32
NaCG1 A:Val904.93
NaCA A:Val904.05
NaNA A:Na5063.53
NaNA A:Na6433.05
NaO A:Hoh6822.98
NaO A:Hoh7914.48
NaO A:Hoh8513.89

interactive model:


Sodium binding site 77 out of 199 in 3fiy


Sodium binding site 77 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 77 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 77 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln254, A: Pro382, A: Na544, A: Na577, A: Hoh916,

conact list:


AtomAtomDistance (A)
NaNE2 A:Gln2544.42
NaOE1 A:Gln2543.90
NaCD A:Gln2544.44
NaCG A:Pro3824.52
NaNA A:Na5444.32
NaNA A:Na5773.82
NaO A:Hoh9162.93

interactive model:


Sodium binding site 78 out of 199 in 3fiy


Sodium binding site 78 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 78 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 78 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser282, A: Asn298, A: Gln299, A: Ala300, A: Hoh692, A: Hoh736,

conact list:


AtomAtomDistance (A)
NaCB A:Ser2823.53
NaOG A:Ser2823.66
NaCA A:Ser2824.91
NaO A:Asn2984.97
NaCB A:Asn2983.57
NaND2 A:Asn2984.36
NaC A:Asn2984.15
NaOD1 A:Asn2983.86
NaCG A:Asn2983.73
NaCA A:Asn2984.45
NaN A:Gln2993.49
NaCB A:Gln2993.98
NaC A:Gln2993.90
NaCA A:Gln2993.94
NaN A:Ala3002.99
NaCB A:Ala3003.43
NaCA A:Ala3003.79
NaO A:Hoh6923.62
NaO A:Hoh7363.11

interactive model:


Sodium binding site 79 out of 199 in 3fiy


Sodium binding site 79 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 79 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 79 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln254, A: Ile324, A: Asp325, A: Phe326, A: Pro382, A: Na542, A: Hoh916,

conact list:


AtomAtomDistance (A)
NaOE1 A:Gln2544.67
NaO A:Ile3244.41
NaO A:Asp3252.67
NaN A:Asp3254.88
NaCB A:Asp3254.30
NaC A:Asp3253.51
NaOD1 A:Asp3254.53
NaCG A:Asp3254.94
NaCA A:Asp3253.66
NaN A:Phe3264.75
NaCB A:Pro3824.56
NaCD A:Pro3823.69
NaCG A:Pro3823.51
NaNA A:Na5424.32
NaO A:Hoh9162.85

interactive model:


Sodium binding site 80 out of 199 in 3fiy


Sodium binding site 80 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 80 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 80 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu292, A: Ile293, A: Arg294, A: Ser321, A: Ala322, A: Na585, A: Na649, A: Hoh868,

conact list:


AtomAtomDistance (A)
NaO A:Leu2923.81
NaC A:Leu2924.71
NaO A:Ile2932.84
NaN A:Ile2934.87
NaC A:Ile2933.67
NaCA A:Ile2934.09
NaN A:Arg2944.70
NaO A:Ser3212.66
NaCB A:Ser3213.60
NaOG A:Ser3214.13
NaC A:Ser3213.72
NaCA A:Ser3214.16
NaN A:Ala3224.87
NaC A:Ala3224.99
NaNA A:Na5854.78
NaNA A:Na6494.30
NaO A:Hoh8684.54

interactive model:


Sodium binding site 81 out of 199 in 3fiy


Sodium binding site 81 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 81 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 81 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln100, A: Asp103, A: Gln107, A: Na616, A: Hoh830, A: Hoh904,

conact list:


AtomAtomDistance (A)
NaO A:Gln1004.91
NaCB A:Asp1033.91
NaOD2 A:Asp1034.56
NaOD1 A:Asp1032.80
NaCG A:Asp1033.58
NaNE2 A:Gln1073.86
NaNA A:Na6163.13
NaO A:Hoh8303.56
NaO A:Hoh9044.80

interactive model:


Sodium binding site 82 out of 199 in 3fiy


Sodium binding site 82 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 82 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 82 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr56, A: Asp73, A: Thr76, A: Arg77, A: Ser87, A: Asp89, A: Na518, A: Na603, A: Hoh676, A: Hoh765,

conact list:


AtomAtomDistance (A)
NaOH A:Tyr564.70
NaO A:Asp733.35
NaC A:Asp734.30
NaCA A:Asp734.51
NaO A:Thr764.27
NaCB A:Thr763.95
NaOG1 A:Thr762.85
NaC A:Thr764.17
NaCA A:Thr764.62
NaN A:Arg774.31
NaCB A:Arg774.58
NaCD A:Arg774.27
NaCG A:Arg773.40
NaNH2 A:Arg774.89
NaCA A:Arg774.63
NaCB A:Ser873.73
NaOG A:Ser873.99
NaOD2 A:Asp893.89
NaOD1 A:Asp892.92
NaCG A:Asp893.74
NaNA A:Na5183.45
NaNA A:Na6033.34
NaO A:Hoh6762.87
NaO A:Hoh7653.51

interactive model:


Sodium binding site 83 out of 199 in 3fiy


Sodium binding site 83 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 83 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 83 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln100, A: Gln460, A: Gln461, A: Arg462, A: Na612, A: Hoh738, A: Hoh746, A: Hoh788, A: Hoh904,

conact list:


AtomAtomDistance (A)
NaOE1 A:Gln1003.89
NaO A:Gln4604.24
NaC A:Gln4604.89
NaO A:Gln4614.91
NaNE2 A:Gln4613.31
NaN A:Gln4614.67
NaCB A:Gln4614.26
NaCD A:Gln4614.21
NaC A:Gln4613.70
NaCG A:Gln4614.30
NaCA A:Gln4613.56
NaO A:Arg4623.66
NaN A:Arg4622.89
NaCB A:Arg4623.92
NaCD A:Arg4624.21
NaC A:Arg4624.21
NaCG A:Arg4624.67
NaCA A:Arg4623.83
NaNA A:Na6124.74
NaO A:Hoh7383.18
NaO A:Hoh7464.71
NaO A:Hoh7884.16
NaO A:Hoh9042.84

interactive model:


Sodium binding site 84 out of 199 in 3fiy


Sodium binding site 84 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 84 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 84 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly400, A: Gln401, A: Val402, A: Thr463, A: Leu464, A: Lys465, A: Gln466, A: Gln469, A: Na639, A: Hoh803, A: Hoh854,

conact list:


AtomAtomDistance (A)
NaO A:Gly4004.81
NaO A:Gln4014.79
NaN A:Gln4014.75
NaOE1 A:Gln4014.90
NaCB A:Gln4013.48
NaCD A:Gln4014.73
NaC A:Gln4013.59
NaCG A:Gln4013.55
NaCA A:Gln4013.39
NaO A:Val4023.70
NaN A:Val4022.86
NaCB A:Val4024.30
NaCG2 A:Val4024.78
NaC A:Val4024.00
NaCA A:Val4023.86
NaCG2 A:Thr4633.74
NaO A:Leu4642.71
NaC A:Leu4643.90
NaN A:Lys4654.57
NaC A:Lys4654.57
NaCA A:Lys4654.26
NaN A:Gln4664.68
NaOE1 A:Gln4694.93
NaNA A:Na6393.17
NaO A:Hoh8033.03
NaO A:Hoh8544.58

interactive model:


Sodium binding site 85 out of 199 in 3fiy


Sodium binding site 85 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 85 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 85 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn333, A: Pro334, A: Gln350, A: Gly359, A: Trp360, A: Glu361, A: Na515, A: Na529, A: Na586, A: Hoh668, A: Hoh700,

conact list:


AtomAtomDistance (A)
NaCB A:Asn3334.25
NaND2 A:Asn3333.30
NaCG A:Asn3334.09
NaO A:Pro3343.93
NaNE2 A:Gln3504.96
NaO A:Gly3593.75
NaC A:Gly3594.56
NaN A:Trp3604.54
NaCB A:Trp3604.42
NaCD1 A:Trp3604.85
NaC A:Trp3603.68
NaCG A:Trp3604.99
NaCA A:Trp3603.55
NaO A:Trp3604.88
NaO A:Glu3614.97
NaN A:Glu3612.86
NaCB A:Glu3613.61
NaOE2 A:Glu3614.98
NaC A:Glu3614.93
NaCA A:Glu3613.81
NaNA A:Na5154.62
NaNA A:Na5293.06
NaNA A:Na5864.75
NaO A:Hoh6682.84
NaO A:Hoh7003.81

interactive model:


Sodium binding site 86 out of 199 in 3fiy


Sodium binding site 86 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 86 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 86 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly85, A: Asp86, A: Ser87, A: Tyr446, A: Na490, A: Hoh687, A: Hoh732, A: Hoh754, A: Hoh826, A: Hoh852,

conact list:


AtomAtomDistance (A)
NaO A:Gly854.60
NaO A:Asp864.91
NaN A:Asp864.72
NaCB A:Asp863.91
NaC A:Asp863.73
NaOD1 A:Asp863.86
NaCG A:Asp864.29
NaCA A:Asp863.50
NaO A:Ser873.49
NaN A:Ser873.04
NaCB A:Ser874.38
NaOG A:Ser873.87
NaC A:Ser874.13
NaCA A:Ser874.03
NaCE2 A:Tyr4463.77
NaCD2 A:Tyr4464.40
NaCZ A:Tyr4464.77
NaOH A:Tyr4464.85
NaNA A:Na4903.43
NaO A:Hoh6873.01
NaO A:Hoh7324.73
NaO A:Hoh7544.69
NaO A:Hoh8263.13
NaO A:Hoh8523.53

interactive model:


Sodium binding site 87 out of 199 in 3fiy


Sodium binding site 87 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 87 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 87 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr368, A: Asp369, A: Na588, A: Na660, A: Hoh906,

conact list:


AtomAtomDistance (A)
NaCD1 A:Tyr3683.84
NaCE1 A:Tyr3683.82
NaOD2 A:Asp3693.88
NaOD1 A:Asp3692.82
NaCG A:Asp3693.73
NaNA A:Na5884.21
NaNA A:Na6603.55
NaO A:Hoh9064.81

interactive model:


Sodium binding site 88 out of 199 in 3fiy


Sodium binding site 88 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 88 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 88 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp473, A: Val474, A: Asn477, A: Gly479, A: Leu480, A: Glu481, A: Na610, A: Hoh677, A: Hoh817,

conact list:


AtomAtomDistance (A)
NaO A:Asp4733.55
NaCB A:Asp4734.28
NaC A:Asp4733.73
NaCA A:Asp4734.67
NaO A:Val4744.81
NaN A:Val4743.73
NaCB A:Val4744.42
NaCG2 A:Val4744.04
NaC A:Val4744.67
NaCA A:Val4743.59
NaCB A:Asn4773.68
NaOD1 A:Asn4773.75
NaCG A:Asn4774.07
NaO A:Gly4793.04
NaC A:Gly4794.15
NaO A:Leu4804.46
NaN A:Leu4804.59
NaC A:Leu4803.77
NaCA A:Leu4804.05
NaN A:Glu4813.35
NaCB A:Glu4814.57
NaCG A:Glu4814.38
NaCA A:Glu4813.86
NaNA A:Na6104.68
NaO A:Hoh6772.99
NaO A:Hoh8173.44

interactive model:


Sodium binding site 89 out of 199 in 3fiy


Sodium binding site 89 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 89 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 89 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu290, A: Arg294, A: Thr377, A: Tyr378, A: Na582,

conact list:


AtomAtomDistance (A)
NaOE2 A:Glu2904.75
NaCD A:Arg2944.06
NaCZ A:Arg2943.51
NaCG A:Arg2944.20
NaNE A:Arg2942.97
NaNH2 A:Arg2943.23
NaNH1 A:Arg2944.80
NaO A:Thr3773.08
NaCB A:Thr3774.98
NaCG2 A:Thr3773.85
NaC A:Thr3774.08
NaCA A:Thr3774.84
NaN A:Tyr3784.94
NaCD1 A:Tyr3784.08
NaCZ A:Tyr3784.75
NaCE1 A:Tyr3783.99
NaCG A:Tyr3784.90
NaCA A:Tyr3784.97
NaNA A:Na5823.17

interactive model:


Sodium binding site 90 out of 199 in 3fiy


Sodium binding site 90 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 90 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 90 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Phe392, A: Asp394, A: Asn403, A: Asp404, A: Pro405, A: Gln406, A: Arg407, A: Hoh678,

conact list:


AtomAtomDistance (A)
NaCB A:Phe3924.75
NaCG A:Phe3924.89
NaOD1 A:Asp3944.87
NaO A:Asn4034.41
NaC A:Asn4034.95
NaO A:Asp4043.95
NaN A:Asp4044.60
NaCB A:Asp4044.00
NaC A:Asp4043.34
NaCA A:Asp4043.37
NaN A:Pro4053.38
NaCB A:Pro4054.67
NaCD A:Pro4053.47
NaC A:Pro4054.06
NaCG A:Pro4053.81
NaCA A:Pro4054.18
NaNE2 A:Gln4063.51
NaN A:Gln4063.05
NaCB A:Gln4063.35
NaCD A:Gln4063.93
NaC A:Gln4064.59
NaCG A:Gln4063.35
NaCA A:Gln4063.76
NaN A:Arg4074.33
NaO A:Hoh6782.95

interactive model:


Sodium binding site 91 out of 199 in 3fiy


Sodium binding site 91 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 91 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 91 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro364, A: Gln412, A: Gly413, A: His414, A: Gly416, A: Ala417, A: Na579, A: Na626, A: Hoh695, A: Hoh701, A: Hoh831, A: Hoh870,

conact list:


AtomAtomDistance (A)
NaCB A:Pro3643.75
NaCG A:Pro3643.81
NaO A:Gln4124.98
NaO A:Gly4132.72
NaN A:Gly4134.98
NaC A:Gly4133.51
NaCA A:Gly4133.64
NaN A:His4144.75
NaC A:Gly4164.51
NaCA A:Gly4164.74
NaN A:Ala4173.96
NaCB A:Ala4174.23
NaCA A:Ala4174.40
NaNA A:Na5793.10
NaNA A:Na6263.19
NaO A:Hoh6952.83
NaO A:Hoh7014.12
NaO A:Hoh8314.54
NaO A:Hoh8704.58

interactive model:


Sodium binding site 92 out of 199 in 3fiy


Sodium binding site 92 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 92 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 92 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr95, A: His96, A: Tyr98, A: Phe137, A: Arg140, A: Hoh838,

conact list:


AtomAtomDistance (A)
NaO A:Tyr952.89
NaCE2 A:Tyr954.08
NaCD1 A:Tyr954.65
NaCD2 A:Tyr954.20
NaCZ A:Tyr954.27
NaC A:Tyr953.98
NaCE1 A:Tyr954.55
NaCG A:Tyr954.50
NaOH A:Tyr954.81
NaCA A:Tyr954.96
NaN A:His964.74
NaCD2 A:His964.83
NaCA A:His964.61
NaCD1 A:Tyr984.14
NaCZ A:Tyr984.66
NaCE1 A:Tyr983.71
NaOH A:Tyr984.89
NaCD1 A:Phe1373.79
NaCE1 A:Phe1374.26
NaCG A:Phe1374.81
NaCZ A:Arg1403.59
NaNE A:Arg1404.90
NaNH2 A:Arg1403.02
NaNH1 A:Arg1403.27
NaO A:Hoh8384.65

interactive model:


Sodium binding site 93 out of 199 in 3fiy


Sodium binding site 93 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 93 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 93 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu203, A: Asn260, A: Asn330, A: Tyr332, A: Na12, A: Na570, A: Na592, A: Hoh728,

conact list:


AtomAtomDistance (A)
NaOE1 A:Glu2033.66
NaOE2 A:Glu2032.87
NaCD A:Glu2033.56
NaCG A:Glu2034.88
NaCB A:Asn2603.80
NaND2 A:Asn2604.02
NaCG A:Asn2604.26
NaCB A:Asn3304.76
NaCE2 A:Tyr3323.48
NaCD2 A:Tyr3323.44
NaCZ A:Tyr3324.73
NaCG A:Tyr3324.67
NaNA A:Na124.78
NaNA A:Na5704.16
NaNA A:Na5923.28
NaO A:Hoh7284.18

interactive model:


Sodium binding site 94 out of 199 in 3fiy


Sodium binding site 94 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 94 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 94 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly109, A: Leu110, A: Lys111, A: Ile475, A: Na489, A: Na561, A: Hoh805,

conact list:


AtomAtomDistance (A)
NaO A:Gly1092.86
NaC A:Gly1093.61
NaCA A:Gly1093.63
NaN A:Leu1104.87
NaCE A:Lys1113.43
NaCD A:Lys1113.86
NaCG A:Lys1114.91
NaNZ A:Lys1112.99
NaCG2 A:Ile4754.08
NaNA A:Na4894.52
NaNA A:Na5614.54
NaO A:Hoh8054.53

interactive model:


Sodium binding site 95 out of 199 in 3fiy


Sodium binding site 95 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 95 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 95 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg336, A: Pro354, A: Glu361, A: Ile362, A: Ala363, A: Glu365, A: Na594, A: Hoh675, A: Hoh740, A: Hoh874, A: Hoh909,

conact list:


AtomAtomDistance (A)
NaNH2 A:Arg3364.49
NaN A:Pro3544.91
NaCD A:Pro3543.62
NaCG A:Pro3543.75
NaOE1 A:Glu3612.81
NaOE2 A:Glu3614.86
NaCD A:Glu3613.66
NaCG A:Glu3613.69
NaO A:Ile3622.84
NaN A:Ile3624.79
NaC A:Ile3623.82
NaCA A:Ile3624.93
NaN A:Ala3634.37
NaCB A:Ala3633.80
NaCA A:Ala3634.13
NaOE2 A:Glu3654.76
NaNA A:Na5944.03
NaO A:Hoh6754.10
NaO A:Hoh7402.96
NaO A:Hoh8744.63
NaO A:Hoh9092.91

interactive model:


Sodium binding site 96 out of 199 in 3fiy


Sodium binding site 96 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 96 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 96 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Met105, A: Arg106, A: Gly109, A: Leu110, A: Arg148, A: Na559, A: Hoh726, A: Hoh805, A: Hoh912, A: Hoh913, A: Hoh914,

conact list:


AtomAtomDistance (A)
NaO A:Met1054.97
NaO A:Arg1062.85
NaCB A:Arg1064.51
NaC A:Arg1063.77
NaCG A:Arg1063.87
NaCA A:Arg1063.96
NaO A:Gly1094.77
NaN A:Gly1093.89
NaC A:Gly1094.20
NaCA A:Gly1093.35
NaN A:Leu1104.80
NaO A:Arg1484.99
NaNA A:Na5594.54
NaO A:Hoh7262.91
NaO A:Hoh8052.97
NaO A:Hoh9124.27
NaO A:Hoh9132.80
NaO A:Hoh9144.17

interactive model:


Sodium binding site 97 out of 199 in 3fiy


Sodium binding site 97 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 97 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 97 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Val188, A: Ala189, A: Gly192, A: Asp193, A: Leu248, A: Pro250, A: Na604, A: Hoh674, A: Hoh698, A: Hoh783, A: Hoh860,

conact list:


AtomAtomDistance (A)
NaO A:Val1882.94
NaC A:Val1883.87
NaCG1 A:Val1884.06
NaCA A:Val1884.98
NaO A:Ala1894.38
NaN A:Ala1894.37
NaC A:Ala1894.51
NaCA A:Ala1894.06
NaN A:Gly1924.39
NaC A:Gly1924.69
NaCA A:Gly1923.99
NaN A:Asp1934.62
NaO A:Leu2484.45
NaCB A:Leu2484.14
NaCD1 A:Leu2484.79
NaCD2 A:Leu2484.68
NaC A:Leu2484.86
NaCG A:Leu2484.78
NaN A:Pro2504.47
NaCB A:Pro2503.63
NaCD A:Pro2504.42
NaCG A:Pro2504.48
NaCA A:Pro2504.07
NaNA A:Na6044.60
NaO A:Hoh6744.93
NaO A:Hoh6982.98
NaO A:Hoh7833.95
NaO A:Hoh8603.06

interactive model:


Sodium binding site 98 out of 199 in 3fiy


Sodium binding site 98 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 98 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 98 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu64, A: Asp65, A: Lys67, A: Tyr95, A: Arg121, A: Arg133, A: Gly134, A: Na629,

conact list:


AtomAtomDistance (A)
NaO A:Glu643.72
NaC A:Glu644.64
NaO A:Asp654.05
NaCB A:Asp653.68
NaOD2 A:Asp654.61
NaC A:Asp654.52
NaCG A:Asp654.70
NaCA A:Asp654.60
NaN A:Lys674.70
NaCB A:Lys674.18
NaCA A:Lys674.79
NaCE2 A:Tyr954.32
NaCD1 A:Tyr954.54
NaCZ A:Tyr953.37
NaCE1 A:Tyr953.51
NaOH A:Tyr952.96
NaO A:Arg1214.94
NaCB A:Arg1213.99
NaCD A:Arg1213.34
NaCZ A:Arg1213.82
NaCG A:Arg1213.53
NaNE A:Arg1213.98
NaNH1 A:Arg1212.87
NaCA A:Arg1214.69
NaO A:Arg1334.75
NaC A:Arg1334.68
NaN A:Gly1344.22
NaCA A:Gly1343.76
NaNA A:Na6293.04

interactive model:


Sodium binding site 99 out of 199 in 3fiy


Sodium binding site 99 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 99 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 99 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro314, A: Glu315, A: Asp316, A: Met317, A: Gln318, A: Na524, A: Hoh737, A: Hoh761, A: Hoh767,

conact list:


AtomAtomDistance (A)
NaO A:Pro3143.00
NaC A:Pro3143.98
NaO A:Glu3153.70
NaN A:Glu3154.31
NaCB A:Glu3154.99
NaC A:Glu3153.63
NaCA A:Glu3153.72
NaN A:Asp3164.16
NaC A:Asp3164.42
NaCA A:Asp3164.85
NaO A:Met3174.98
NaN A:Met3173.66
NaCB A:Met3173.93
NaC A:Met3173.88
NaCG A:Met3174.87
NaCA A:Met3173.98
NaN A:Gln3183.02
NaOE1 A:Gln3184.62
NaCB A:Gln3183.44
NaCG A:Gln3184.83
NaCA A:Gln3183.77
NaNA A:Na5243.22
NaO A:Hoh7374.97
NaO A:Hoh7614.98
NaO A:Hoh7674.80

interactive model:


Sodium binding site 100 out of 199 in 3fiy


Sodium binding site 100 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 100 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 100 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile82, A: Lys83, A: Asn84, A: Gly85, A: Na584, A: Hoh839,

conact list:


AtomAtomDistance (A)
NaO A:Ile824.29
NaC A:Ile824.86
NaO A:Lys834.91
NaN A:Lys834.61
NaCB A:Lys834.30
NaC A:Lys833.71
NaCG A:Lys834.36
NaCA A:Lys833.55
NaN A:Asn842.91
NaCB A:Asn844.96
NaC A:Asn844.78
NaCA A:Asn843.84
NaN A:Gly854.71
NaNA A:Na5844.79
NaO A:Hoh8394.61

interactive model:


Sodium binding site 101 out of 199 in 3fiy


Sodium binding site 101 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 101 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 101 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ala357, A: Ala391, A: Phe392, A: Asp393, A: Ser447, A: Lys448, A: Arg449, A: Hoh747,

conact list:


AtomAtomDistance (A)
NaCB A:Ala3573.71
NaO A:Ala3914.49
NaC A:Ala3913.81
NaCB A:Ala3913.76
NaCA A:Ala3914.14
NaO A:Phe3922.92
NaN A:Phe3923.40
NaC A:Phe3923.24
NaCA A:Phe3923.81
NaN A:Asp3933.82
NaCA A:Asp3934.17
NaO A:Ser4473.98
NaC A:Ser4474.68
NaO A:Lys4484.88
NaN A:Lys4484.52
NaCB A:Lys4484.14
NaCD A:Lys4484.00
NaC A:Lys4483.66
NaCG A:Lys4484.71
NaCA A:Lys4483.44
NaO A:Arg4493.83
NaN A:Arg4492.92
NaCB A:Arg4494.15
NaC A:Arg4494.26
NaCG A:Arg4494.78
NaCA A:Arg4493.93
NaO A:Hoh7474.78

interactive model:


Sodium binding site 102 out of 199 in 3fiy


Sodium binding site 102 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 102 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 102 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile362, A: Phe392, A: Gln406, A: Gly409, A: Tyr410, A: Hoh685, A: Hoh691, A: Hoh828,

conact list:


AtomAtomDistance (A)
NaCB A:Ile3624.92
NaCD1 A:Ile3623.45
NaCG2 A:Ile3624.26
NaCG1 A:Ile3624.56
NaCE2 A:Phe3924.30
NaCZ A:Phe3923.69
NaCE1 A:Phe3924.61
NaO A:Gln4062.91
NaCB A:Gln4064.38
NaC A:Gln4063.88
NaCA A:Gln4064.26
NaO A:Gly4094.92
NaC A:Gly4094.25
NaCA A:Gly4094.64
NaN A:Tyr4103.67
NaCB A:Tyr4103.93
NaCD2 A:Tyr4104.73
NaCG A:Tyr4104.86
NaCA A:Tyr4103.99
NaO A:Hoh6853.03
NaO A:Hoh6912.98
NaO A:Hoh8284.04

interactive model:


Sodium binding site 103 out of 199 in 3fiy


Sodium binding site 103 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 103 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 103 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Trp159, A: Val206, A: Thr207, A: Phe217, A: Na526, A: Na536,

conact list:


AtomAtomDistance (A)
NaCB A:Trp1594.18
NaCD1 A:Trp1593.77
NaCD2 A:Trp1593.19
NaCE3 A:Trp1593.58
NaCG A:Trp1593.47
NaCZ3 A:Trp1594.07
NaCZ2 A:Trp1593.94
NaCE2 A:Trp1593.39
NaNE1 A:Trp1593.74
NaCH2 A:Trp1594.23
NaO A:Val2063.83
NaCB A:Val2064.40
NaC A:Val2063.77
NaCG1 A:Val2063.91
NaCA A:Val2064.75
NaO A:Thr2074.73
NaN A:Thr2073.45
NaCB A:Thr2073.82
NaCG2 A:Thr2074.54
NaOG1 A:Thr2073.27
NaC A:Thr2074.46
NaCA A:Thr2073.22
NaCB A:Phe2174.48
NaCE2 A:Phe2174.68
NaCD2 A:Phe2173.83
NaCG A:Phe2174.66
NaNA A:Na5263.75
NaNA A:Na5363.12

interactive model:


Sodium binding site 104 out of 199 in 3fiy


Sodium binding site 104 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 104 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 104 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu226, A: Arg229, A: Asn307, A: Phe311, A: Hoh717,

conact list:


AtomAtomDistance (A)
NaCD2 A:Leu2264.02
NaCB A:Arg2294.89
NaCD A:Arg2293.59
NaCZ A:Arg2294.05
NaCG A:Arg2294.84
NaNE A:Arg2294.26
NaNH1 A:Arg2293.00
NaOD1 A:Asn3074.40
NaCE2 A:Phe3114.50
NaCZ A:Phe3113.77
NaCE1 A:Phe3114.67
NaO A:Hoh7172.86

interactive model:


Sodium binding site 105 out of 199 in 3fiy


Sodium binding site 105 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 105 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 105 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn262, A: Tyr332, A: Asn333, A: Trp360, A: Na12, A: Na558, A: Na586, A: Na622, A: Hoh910,

conact list:


AtomAtomDistance (A)
NaND2 A:Asn2624.07
NaOD1 A:Asn2623.04
NaCG A:Asn2623.94
NaCB A:Tyr3324.55
NaCD2 A:Tyr3324.87
NaO A:Asn3334.90
NaN A:Asn3334.87
NaND2 A:Asn3334.15
NaOD1 A:Asn3332.97
NaCG A:Asn3333.89
NaCD2 A:Trp3604.89
NaCE3 A:Trp3604.96
NaCZ3 A:Trp3604.97
NaCZ2 A:Trp3604.86
NaCE2 A:Trp3604.83
NaCH2 A:Trp3604.93
NaNA A:Na123.31
NaNA A:Na5584.16
NaNA A:Na5863.85
NaNA A:Na6223.38
NaO A:Hoh9102.77

interactive model:


Sodium binding site 106 out of 199 in 3fiy


Sodium binding site 106 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 106 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 106 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu143, A: Gly144, A: His146, A: Lys147, A: Na600, A: Hoh681, A: Hoh705, A: Hoh833,

conact list:


AtomAtomDistance (A)
NaO A:Glu1432.85
NaCB A:Glu1434.08
NaC A:Glu1433.68
NaCG A:Glu1434.65
NaCA A:Glu1433.82
NaN A:Gly1444.92
NaO A:His1464.98
NaN A:His1464.99
NaCB A:His1463.85
NaC A:His1464.25
NaCG A:His1464.99
NaCA A:His1464.58
NaN A:Lys1473.69
NaCB A:Lys1474.05
NaCE A:Lys1474.12
NaCD A:Lys1474.96
NaCA A:Lys1474.09
NaNZ A:Lys1474.76
NaNA A:Na6004.72
NaO A:Hoh6812.98
NaO A:Hoh7053.09
NaO A:Hoh8333.06

interactive model:


Sodium binding site 107 out of 199 in 3fiy


Sodium binding site 107 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 107 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 107 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr368, A: Arg420, A: Asp424, A: Hoh905, A: Hoh906,

conact list:


AtomAtomDistance (A)
NaCE2 A:Tyr3683.92
NaCD2 A:Tyr3684.79
NaCZ A:Tyr3684.04
NaCE1 A:Tyr3684.97
NaOH A:Tyr3683.85
NaO A:Arg4204.48
NaCB A:Arg4203.87
NaCD A:Arg4203.67
NaCZ A:Arg4204.14
NaC A:Arg4204.81
NaCG A:Arg4204.14
NaNE A:Arg4204.35
NaNH1 A:Arg4203.08
NaCA A:Arg4204.69
NaOD2 A:Asp4242.86
NaOD1 A:Asp4244.06
NaCG A:Asp4243.79
NaO A:Hoh9052.95
NaO A:Hoh9064.37

interactive model:


Sodium binding site 108 out of 199 in 3fiy


Sodium binding site 108 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 108 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 108 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln132, A: Arg133, A: Leu135, A: Asp136, A: Arg139,

conact list:


AtomAtomDistance (A)
NaO A:Gln1322.95
NaNE2 A:Gln1322.87
NaCB A:Gln1323.80
NaCD A:Gln1324.08
NaC A:Gln1323.73
NaCG A:Gln1324.52
NaCA A:Gln1323.75
NaN A:Arg1335.00
NaO A:Leu1354.95
NaCB A:Leu1353.84
NaCD2 A:Leu1354.06
NaC A:Leu1354.25
NaCG A:Leu1354.03
NaCA A:Leu1354.60
NaN A:Asp1363.72
NaCB A:Asp1364.09
NaOD1 A:Asp1364.84
NaCG A:Asp1365.00
NaCA A:Asp1364.09
NaCZ A:Arg1393.71
NaNH2 A:Arg1393.00
NaNH1 A:Arg1393.52

interactive model:


Sodium binding site 109 out of 199 in 3fiy


Sodium binding site 109 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 109 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 109 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly66, A: Lys67, A: Pro124, A: Asp125, A: Asn131, A: Na636, A: Hoh684, A: Hoh780, A: Hoh885,

conact list:


AtomAtomDistance (A)
NaO A:Gly662.82
NaN A:Gly664.99
NaC A:Gly663.58
NaCA A:Gly663.57
NaN A:Lys674.86
NaCB A:Pro1243.94
NaCG A:Pro1243.65
NaOD1 A:Asp1254.57
NaOD1 A:Asn1314.13
NaNA A:Na6364.83
NaO A:Hoh6842.96
NaO A:Hoh7804.87
NaO A:Hoh8854.47

interactive model:


Sodium binding site 110 out of 199 in 3fiy


Sodium binding site 110 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 110 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 110 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile293, A: Arg294, A: Tyr378, A: Gly379, A: Na576,

conact list:


AtomAtomDistance (A)
NaCG2 A:Ile2933.72
NaCZ A:Arg2944.55
NaNH2 A:Arg2944.54
NaNH1 A:Arg2943.97
NaO A:Tyr3782.79
NaC A:Tyr3783.92
NaCA A:Tyr3784.83
NaN A:Gly3794.73
NaCA A:Gly3794.62
NaNA A:Na5763.13

interactive model:


Sodium binding site 111 out of 199 in 3fiy


Sodium binding site 111 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 111 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 111 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr378, A: Gly379, A: Lys380, A: Leu381, A: Na575,

conact list:


AtomAtomDistance (A)
NaO A:Tyr3782.97
NaC A:Tyr3783.90
NaO A:Gly3793.53
NaN A:Gly3794.17
NaC A:Gly3793.36
NaCA A:Gly3793.50
NaO A:Lys3804.59
NaN A:Lys3803.81
NaC A:Lys3804.01
NaCA A:Lys3804.50
NaN A:Leu3813.49
NaCB A:Leu3813.28
NaCD1 A:Leu3814.45
NaCD2 A:Leu3814.46
NaCG A:Leu3813.44
NaCA A:Leu3813.81
NaNA A:Na5753.13

interactive model:


Sodium binding site 112 out of 199 in 3fiy


Sodium binding site 112 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 112 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 112 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu197, A: Gln254, A: Asp325, A: Phe326, A: Pro382, A: Tyr384, A: Arg429, A: Na542, A: Hoh916,

conact list:


AtomAtomDistance (A)
NaCD2 A:Leu1974.84
NaNE2 A:Gln2543.36
NaOE1 A:Gln2542.90
NaCD A:Gln2543.49
NaCG A:Gln2544.94
NaO A:Asp3254.59
NaCB A:Phe3264.37
NaCD1 A:Phe3264.72
NaCG A:Phe3264.86
NaCB A:Pro3823.91
NaCG A:Pro3824.49
NaCE2 A:Tyr3844.96
NaCD1 A:Tyr3844.71
NaCZ A:Tyr3843.62
NaCE1 A:Tyr3843.44
NaOH A:Tyr3842.92
NaCB A:Arg4294.81
NaCD A:Arg4294.97
NaCG A:Arg4294.23
NaNE A:Arg4294.90
NaNA A:Na5423.82
NaO A:Hoh9164.30

interactive model:


Sodium binding site 113 out of 199 in 3fiy


Sodium binding site 113 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 113 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 113 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu48, A: Lys111, A: Thr112, A: Asp149, A: Ile150, A: Leu151, A: Hoh840, A: Hoh891,

conact list:


AtomAtomDistance (A)
NaCD2 A:Leu484.37
NaO A:Lys1112.88
NaCB A:Lys1113.80
NaCD A:Lys1114.42
NaC A:Lys1113.69
NaCG A:Lys1114.72
NaCA A:Lys1113.76
NaN A:Thr1124.98
NaO A:Asp1493.58
NaC A:Asp1494.56
NaCA A:Ile1504.90
NaN A:Leu1514.37
NaCB A:Leu1514.56
NaCD1 A:Leu1514.11
NaCD2 A:Leu1514.53
NaCG A:Leu1513.68
NaO A:Hoh8403.17
NaO A:Hoh8913.22

interactive model:


Sodium binding site 114 out of 199 in 3fiy


Sodium binding site 114 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 114 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 114 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly413, A: Gly416, A: Ala417, A: Arg420, A: Na556, A: Na626, A: Hoh701, A: Hoh766,

conact list:


AtomAtomDistance (A)
NaO A:Gly4134.82
NaO A:Gly4163.66
NaC A:Gly4163.68
NaCA A:Gly4164.34
NaN A:Ala4173.82
NaCB A:Ala4174.73
NaCA A:Ala4174.01
NaCB A:Arg4204.78
NaCD A:Arg4203.34
NaCZ A:Arg4203.96
NaCG A:Arg4203.74
NaNE A:Arg4202.87
NaNH2 A:Arg4204.23
NaNA A:Na5563.10
NaNA A:Na6263.91
NaO A:Hoh7014.58
NaO A:Hoh7664.15

interactive model:


Sodium binding site 115 out of 199 in 3fiy


Sodium binding site 115 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 115 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 115 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His185, A: Gln243, A: Ala244, A: Phe245, A: Ala247, A: Leu248, A: Hoh843,

conact list:


AtomAtomDistance (A)
NaNE2 A:His1854.60
NaCB A:His1854.63
NaND1 A:His1852.81
NaCD2 A:His1854.98
NaCE1 A:His1853.31
NaCG A:His1854.07
NaO A:Gln2434.69
NaO A:Ala2442.89
NaN A:Ala2444.70
NaC A:Ala2443.54
NaCB A:Ala2443.79
NaCA A:Ala2443.41
NaN A:Phe2454.85
NaN A:Ala2474.86
NaC A:Ala2474.50
NaCB A:Ala2473.38
NaCA A:Ala2474.44
NaN A:Leu2484.19
NaCB A:Leu2484.70
NaCD1 A:Leu2484.04
NaCD2 A:Leu2484.40
NaCG A:Leu2483.67
NaCA A:Leu2484.91
NaO A:Hoh8434.15

interactive model:


Sodium binding site 116 out of 199 in 3fiy


Sodium binding site 116 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 116 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 116 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln123, A: Arg128, A: Ile130, A: Glu182, A: Na500, A: Na535,

conact list:


AtomAtomDistance (A)
NaNE2 A:Gln1233.48
NaCD A:Gln1234.68
NaO A:Arg1283.61
NaCB A:Arg1284.64
NaC A:Arg1284.69
NaCD1 A:Ile1304.75
NaO A:Glu1824.85
NaCB A:Glu1824.56
NaNA A:Na5003.11
NaNA A:Na5353.15

interactive model:


Sodium binding site 117 out of 199 in 3fiy


Sodium binding site 117 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 117 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 117 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu286, A: Glu290, A: Thr377, A: Tyr378, A: Na512, A: Na554, A: Hoh736, A: Hoh741,

conact list:


AtomAtomDistance (A)
NaOE1 A:Glu2864.51
NaOE1 A:Glu2903.63
NaOE2 A:Glu2902.84
NaCD A:Glu2903.60
NaCG2 A:Thr3773.96
NaCZ A:Tyr3784.16
NaCE1 A:Tyr3784.15
NaOH A:Tyr3783.75
NaNA A:Na5123.81
NaNA A:Na5543.17
NaO A:Hoh7364.91
NaO A:Hoh7412.97

interactive model:


Sodium binding site 118 out of 199 in 3fiy


Sodium binding site 118 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 118 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 118 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly46, A: Phe47, A: Leu48, A: Tyr384, A: Arg429, A: Gly430, A: Na632, A: Hoh859, A: Hoh903,

conact list:


AtomAtomDistance (A)
NaO A:Gly463.51
NaC A:Gly464.26
NaN A:Phe474.61
NaC A:Phe474.65
NaCA A:Phe474.25
NaN A:Leu484.21
NaCB A:Leu484.76
NaCD1 A:Leu484.41
NaCG A:Leu484.11
NaOH A:Tyr3844.84
NaO A:Arg4292.89
NaCB A:Arg4293.70
NaCD A:Arg4294.54
NaCZ A:Arg4294.09
NaC A:Arg4293.73
NaCG A:Arg4294.64
NaNE A:Arg4293.62
NaNH2 A:Arg4293.87
NaCA A:Arg4293.82
NaN A:Gly4305.00
NaNA A:Na6324.69
NaO A:Hoh8594.29
NaO A:Hoh9034.35

interactive model:


Sodium binding site 119 out of 199 in 3fiy


Sodium binding site 119 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 119 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 119 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro79, A: Gly80, A: Lys81, A: Ile82, A: Asn84, A: Gly85, A: Na495, A: Na565, A: Hoh669, A: Hoh839,

conact list:


AtomAtomDistance (A)
NaC A:Pro794.22
NaCA A:Pro794.54
NaO A:Gly804.64
NaN A:Gly803.05
NaC A:Gly804.02
NaCA A:Gly803.46
NaN A:Lys814.37
NaO A:Ile823.07
NaN A:Ile824.39
NaC A:Ile824.19
NaCA A:Ile824.85
NaN A:Asn845.00
NaC A:Asn844.83
NaN A:Gly853.75
NaCA A:Gly853.75
NaNA A:Na4953.20
NaNA A:Na5654.79
NaO A:Hoh6692.96
NaO A:Hoh8394.93

interactive model:


Sodium binding site 120 out of 199 in 3fiy


Sodium binding site 120 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 120 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 120 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Met317, A: Gln318, A: Thr319, A: Ser321, A: Ala322, A: Na545, A: Hoh799, A: Hoh868, A: Hoh907, A: Hoh908,

conact list:


AtomAtomDistance (A)
NaO A:Met3174.87
NaO A:Gln3182.90
NaCB A:Gln3184.29
NaCD A:Gln3184.73
NaC A:Gln3183.73
NaCG A:Gln3183.58
NaCA A:Gln3183.82
NaN A:Thr3194.99
NaO A:Ser3213.64
NaN A:Ser3214.72
NaCB A:Ser3214.10
NaOG A:Ser3213.15
NaC A:Ser3213.58
NaCA A:Ser3214.30
NaN A:Ala3223.60
NaC A:Ala3224.94
NaCB A:Ala3224.57
NaCA A:Ala3223.76
NaNA A:Na5454.78
NaO A:Hoh7993.12
NaO A:Hoh8684.08
NaO A:Hoh9072.87
NaO A:Hoh9084.77

interactive model:


Sodium binding site 121 out of 199 in 3fiy


Sodium binding site 121 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 121 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 121 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn262, A: Asn333, A: Met335, A: Trp360, A: Na550, A: Na570, A: Na622, A: Hoh668, A: Hoh700, A: Hoh910,

conact list:


AtomAtomDistance (A)
NaND2 A:Asn2624.62
NaOD1 A:Asn2623.99
NaCG A:Asn2624.49
NaND2 A:Asn3333.10
NaOD1 A:Asn3334.14
NaCG A:Asn3334.05
NaCG A:Met3354.37
NaSD A:Met3354.73
NaCD1 A:Trp3604.73
NaNE1 A:Trp3604.78
NaNA A:Na5504.75
NaNA A:Na5703.85
NaNA A:Na6224.45
NaO A:Hoh6682.95
NaO A:Hoh7003.75
NaO A:Hoh9102.89

interactive model:


Sodium binding site 122 out of 199 in 3fiy


Sodium binding site 122 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 122 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 122 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln296, A: Tyr297, A: Leu302, A: Hoh778, A: Hoh814, A: Hoh855,

conact list:


AtomAtomDistance (A)
NaCB A:Gln2963.92
NaC A:Gln2963.84
NaCA A:Gln2963.70
NaO A:Tyr2973.86
NaN A:Tyr2973.01
NaCB A:Tyr2973.84
NaCD2 A:Tyr2974.05
NaC A:Tyr2974.38
NaCG A:Tyr2974.42
NaCA A:Tyr2973.93
NaCD1 A:Leu3024.46
NaCD2 A:Leu3024.83
NaO A:Hoh7783.10
NaO A:Hoh8143.02
NaO A:Hoh8554.13

interactive model:


Sodium binding site 123 out of 199 in 3fiy


Sodium binding site 123 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 123 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 123 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr368, A: Asp369, A: Met372, A: Arg376, A: Na552, A: Na597, A: Hoh739,

conact list:


AtomAtomDistance (A)
NaO A:Tyr3684.73
NaCD1 A:Tyr3684.09
NaCZ A:Tyr3684.66
NaC A:Tyr3684.98
NaCE1 A:Tyr3683.68
NaOH A:Tyr3684.91
NaO A:Asp3694.33
NaN A:Asp3694.59
NaCB A:Asp3694.09
NaOD2 A:Asp3694.83
NaC A:Asp3694.55
NaOD1 A:Asp3692.89
NaCG A:Asp3693.79
NaCA A:Asp3693.73
NaCB A:Met3723.70
NaCG A:Met3724.04
NaNH1 A:Arg3763.88
NaNA A:Na5524.21
NaNA A:Na5973.42
NaO A:Hoh7393.03

interactive model:


Sodium binding site 124 out of 199 in 3fiy


Sodium binding site 124 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 124 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 124 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro44, A: Glu45, A: Gly46, A: Phe47, A: Asn478, A: Na522, A: Na611, A: Hoh697, A: Hoh879, A: Hoh895,

conact list:


AtomAtomDistance (A)
NaO A:Pro444.49
NaO A:Glu454.95
NaN A:Glu454.85
NaCB A:Glu454.29
NaC A:Glu453.76
NaCG A:Glu453.94
NaCA A:Glu453.66
NaN A:Gly462.92
NaC A:Gly464.59
NaCA A:Gly463.85
NaN A:Phe474.53
NaND2 A:Asn4784.20
NaOD1 A:Asn4784.73
NaCG A:Asn4784.52
NaNA A:Na5223.24
NaNA A:Na6114.93
NaO A:Hoh6973.83
NaO A:Hoh8794.62
NaO A:Hoh8954.71

interactive model:


Sodium binding site 125 out of 199 in 3fiy


Sodium binding site 125 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 125 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 125 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln469, A: Asp473, A: Na15, A: Na492, A: Hoh715, A: Hoh733, A: Hoh775, A: Hoh915,

conact list:


AtomAtomDistance (A)
NaO A:Gln4694.37
NaCB A:Gln4694.70
NaC A:Gln4694.74
NaOD2 A:Asp4732.75
NaOD1 A:Asp4734.05
NaCG A:Asp4733.76
NaNA A:Na153.90
NaNA A:Na4923.84
NaO A:Hoh7152.95
NaO A:Hoh7334.05
NaO A:Hoh7753.64
NaO A:Hoh9153.94

interactive model:


Sodium binding site 126 out of 199 in 3fiy


Sodium binding site 126 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 126 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 126 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His185, A: Ala189,

conact list:


AtomAtomDistance (A)
NaNE2 A:His1852.91
NaND1 A:His1854.98
NaCD2 A:His1853.82
NaCE1 A:His1853.86
NaCG A:His1855.00
NaCB A:Ala1894.06

interactive model:


Sodium binding site 127 out of 199 in 3fiy


Sodium binding site 127 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 127 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 127 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Trp159, A: Glu203, A: Val206, A: Na558, A: Hoh710, A: Hoh728, A: Hoh818, A: Hoh835, A: Hoh919,

conact list:


AtomAtomDistance (A)
NaCZ3 A:Trp1594.68
NaCZ2 A:Trp1594.17
NaCH2 A:Trp1593.63
NaOE1 A:Glu2032.83
NaOE2 A:Glu2033.65
NaCD A:Glu2033.62
NaCG2 A:Val2064.55
NaCG1 A:Val2064.93
NaNA A:Na5583.28
NaO A:Hoh7104.57
NaO A:Hoh7282.98
NaO A:Hoh8183.20
NaO A:Hoh8352.94
NaO A:Hoh9193.75

interactive model:


Sodium binding site 128 out of 199 in 3fiy


Sodium binding site 128 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 128 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 128 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile71, A: Arg74, A: Gln163, A: Glu166, A: Pro219, A: Na523, A: Hoh690, A: Hoh773, A: Hoh796, A: Hoh871,

conact list:


AtomAtomDistance (A)
NaO A:Ile714.61
NaCB A:Ile714.12
NaCG2 A:Ile713.92
NaC A:Ile714.98
NaCA A:Ile714.29
NaCB A:Arg744.32
NaCZ A:Arg744.88
NaCG A:Arg744.67
NaNE A:Arg744.65
NaNH1 A:Arg744.82
NaNE2 A:Gln1632.88
NaOE1 A:Gln1633.60
NaCD A:Gln1633.65
NaOE1 A:Glu1664.88
NaCB A:Glu1664.75
NaCD A:Glu1664.69
NaCG A:Glu1663.97
NaCB A:Pro2194.60
NaCA A:Pro2194.93
NaNA A:Na5233.15
NaO A:Hoh6904.08
NaO A:Hoh7734.74
NaO A:Hoh7963.45
NaO A:Hoh8713.53

interactive model:


Sodium binding site 129 out of 199 in 3fiy


Sodium binding site 129 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 129 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 129 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro354, A: Ile362, A: Ala363, A: Pro364, A: Na560, A: Hoh691, A: Hoh707, A: Hoh740, A: Hoh828,

conact list:


AtomAtomDistance (A)
NaCB A:Pro3544.60
NaCD A:Pro3544.83
NaCG A:Pro3543.68
NaO A:Ile3622.83
NaCB A:Ile3624.14
NaCG2 A:Ile3623.87
NaC A:Ile3623.75
NaCA A:Ile3624.60
NaN A:Ala3634.50
NaCA A:Ala3634.55
NaCD A:Pro3644.14
NaNA A:Na5604.03
NaO A:Hoh6914.94
NaO A:Hoh7072.95
NaO A:Hoh7404.97
NaO A:Hoh8283.12

interactive model:


Sodium binding site 130 out of 199 in 3fiy


Sodium binding site 130 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 130 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 130 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg472, A: Asp473, A: Ala476, A: Na492, A: Na610, A: Hoh733,

conact list:


AtomAtomDistance (A)
NaO A:Arg4724.69
NaC A:Arg4724.92
NaCG A:Arg4724.88
NaO A:Asp4734.86
NaN A:Asp4734.63
NaCB A:Asp4734.35
NaOD2 A:Asp4734.90
NaC A:Asp4734.95
NaOD1 A:Asp4732.86
NaCG A:Asp4733.89
NaCA A:Asp4733.97
NaCB A:Ala4763.80
NaNA A:Na4924.63
NaNA A:Na6103.33
NaO A:Hoh7334.43

interactive model:


Sodium binding site 131 out of 199 in 3fiy


Sodium binding site 131 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 131 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 131 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro124, A: Asp125, A: Ser126, A: Trp164, A: Na620, A: Hoh782,

conact list:


AtomAtomDistance (A)
NaO A:Pro1244.88
NaO A:Asp1255.00
NaN A:Asp1254.96
NaCB A:Asp1253.39
NaC A:Asp1253.79
NaCG A:Asp1254.70
NaCA A:Asp1253.59
NaN A:Ser1263.02
NaCB A:Ser1263.70
NaOG A:Ser1263.46
NaCA A:Ser1263.97
NaCB A:Trp1643.71
NaCG A:Trp1644.67
NaCA A:Trp1644.68
NaNA A:Na6203.24
NaO A:Hoh7823.39

interactive model:


Sodium binding site 132 out of 199 in 3fiy


Sodium binding site 132 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 132 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 132 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp369, A: Leu370, A: Met372, A: Gly373, A: Arg376, A: Na588, A: Hoh779,

conact list:


AtomAtomDistance (A)
NaO A:Asp3692.91
NaCB A:Asp3694.08
NaC A:Asp3693.76
NaOD1 A:Asp3694.72
NaCG A:Asp3694.72
NaCA A:Asp3694.01
NaN A:Leu3704.92
NaCB A:Met3724.58
NaC A:Met3724.49
NaN A:Gly3733.65
NaCA A:Gly3733.65
NaNH1 A:Arg3764.86
NaNA A:Na5883.42
NaO A:Hoh7794.81

interactive model:


Sodium binding site 133 out of 199 in 3fiy


Sodium binding site 133 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 133 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 133 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Met205, A: Val206, A: Asn260, A: Asn262, A: Gln284, A: Na532, A: Na622, A: Hoh813, A: Hoh829,

conact list:


AtomAtomDistance (A)
NaO A:Met2054.54
NaCB A:Met2053.79
NaC A:Met2054.29
NaCG A:Met2053.32
NaSD A:Met2054.99
NaCA A:Met2054.73
NaN A:Val2064.25
NaCB A:Val2064.85
NaCG2 A:Val2063.83
NaCA A:Val2064.54
NaND2 A:Asn2602.99
NaOD1 A:Asn2604.02
NaCG A:Asn2603.93
NaND2 A:Asn2624.63
NaNE2 A:Gln2843.81
NaOE1 A:Gln2844.76
NaCD A:Gln2844.51
NaNA A:Na5323.24
NaNA A:Na6223.26
NaO A:Hoh8132.87
NaO A:Hoh8294.02

interactive model:


Sodium binding site 134 out of 199 in 3fiy


Sodium binding site 134 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 134 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 134 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His281, A: Asp369, A: Leu370, A: Gly373, A: Ile374, A: Na505, A: Na615, A: Hoh671, A: Hoh779,

conact list:


AtomAtomDistance (A)
NaNE2 A:His2814.53
NaND1 A:His2814.80
NaCE1 A:His2813.81
NaO A:Asp3694.04
NaC A:Asp3694.75
NaO A:Leu3703.14
NaN A:Leu3704.68
NaCB A:Leu3704.62
NaCD1 A:Leu3703.68
NaC A:Leu3703.84
NaCG A:Leu3704.61
NaCA A:Leu3703.72
NaO A:Gly3734.52
NaN A:Gly3734.20
NaC A:Gly3733.72
NaCA A:Gly3733.56
NaN A:Ile3743.55
NaCB A:Ile3744.84
NaCD1 A:Ile3745.00
NaCG1 A:Ile3744.04
NaCA A:Ile3744.44
NaNA A:Na5054.69
NaNA A:Na6153.49
NaO A:Hoh6712.99
NaO A:Hoh7793.21

interactive model:


Sodium binding site 135 out of 199 in 3fiy


Sodium binding site 135 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 135 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 135 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg139, A: Val142, A: Glu143, A: His146, A: Gln194, A: Na571, A: Hoh705, A: Hoh722,

conact list:


AtomAtomDistance (A)
NaO A:Arg1394.90
NaO A:Val1423.92
NaCB A:Val1424.41
NaC A:Val1423.89
NaCG1 A:Val1423.55
NaCA A:Val1424.82
NaN A:Glu1433.65
NaCB A:Glu1434.01
NaOE2 A:Glu1434.99
NaCD A:Glu1434.73
NaC A:Glu1434.74
NaCG A:Glu1433.42
NaCA A:Glu1433.47
NaNE2 A:His1464.34
NaCB A:His1464.64
NaCD2 A:His1463.45
NaCG A:His1464.32
NaNE2 A:Gln1942.90
NaOE1 A:Gln1944.96
NaCB A:Gln1943.88
NaCD A:Gln1943.82
NaCG A:Gln1943.87
NaCA A:Gln1944.91
NaNA A:Na5714.72
NaO A:Hoh7053.14
NaO A:Hoh7224.02

interactive model:


Sodium binding site 136 out of 199 in 3fiy


Sodium binding site 136 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 136 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 136 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn84, A: Gly85, A: Asp86, A: Na661, A: Hoh893,

conact list:


AtomAtomDistance (A)
NaO A:Asn843.13
NaND2 A:Asn844.72
NaC A:Asn844.24
NaO A:Gly853.18
NaN A:Gly854.67
NaC A:Gly853.65
NaCA A:Gly854.06
NaN A:Asp864.43
NaOD1 A:Asp864.70
NaCA A:Asp864.84
NaNA A:Na6613.31
NaO A:Hoh8934.90

interactive model:


Sodium binding site 137 out of 199 in 3fiy


Sodium binding site 137 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 137 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 137 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His96, A: Arg97, A: Tyr98, A: Glu99, A: Gln100, A: Na525, A: Hoh706,

conact list:


AtomAtomDistance (A)
NaO A:His964.34
NaO A:Arg973.89
NaCB A:Arg974.61
NaC A:Arg974.03
NaCA A:Arg973.96
NaN A:Tyr984.82
NaN A:Glu994.04
NaCB A:Glu993.82
NaC A:Glu994.05
NaCG A:Glu994.87
NaCA A:Glu994.16
NaNE2 A:Gln1003.94
NaN A:Gln1003.28
NaCB A:Gln1003.85
NaCD A:Gln1004.13
NaCG A:Gln1003.22
NaCA A:Gln1003.99
NaNA A:Na5253.13
NaO A:Hoh7062.90

interactive model:


Sodium binding site 138 out of 199 in 3fiy


Sodium binding site 138 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 138 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 138 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr76, A: Arg77, A: Gly85, A: Ser87, A: Asp89, A: Na514, A: Na547, A: Hoh672, A: Hoh687, A: Hoh758, A: Hoh765,

conact list:


AtomAtomDistance (A)
NaO A:Thr763.06
NaCB A:Thr764.75
NaOG1 A:Thr764.63
NaC A:Thr763.89
NaCA A:Thr764.99
NaN A:Arg774.32
NaCB A:Arg774.63
NaCG A:Arg774.15
NaCA A:Arg774.01
NaO A:Gly854.67
NaCB A:Ser873.82
NaOG A:Ser874.13
NaOD2 A:Asp894.65
NaNA A:Na5144.15
NaNA A:Na5473.34
NaO A:Hoh6723.89
NaO A:Hoh6874.22
NaO A:Hoh7584.67
NaO A:Hoh7654.43

interactive model:


Sodium binding site 139 out of 199 in 3fiy


Sodium binding site 139 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 139 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 139 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp193, A: Ser249, A: Pro250, A: Ala251, A: Na562, A: Hoh698, A: Hoh844, A: Hoh860,

conact list:


AtomAtomDistance (A)
NaCB A:Asp1933.79
NaOD2 A:Asp1933.94
NaCG A:Asp1934.15
NaCA A:Asp1934.95
NaO A:Ser2494.42
NaN A:Pro2504.79
NaCB A:Pro2504.49
NaC A:Pro2503.83
NaCA A:Pro2503.69
NaN A:Ala2513.01
NaCB A:Ala2513.61
NaCA A:Ala2513.92
NaNA A:Na5624.60
NaO A:Hoh6984.27
NaO A:Hoh8443.84
NaO A:Hoh8604.58

interactive model:


Sodium binding site 140 out of 199 in 3fiy


Sodium binding site 140 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 140 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 140 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg128, A: Gln129, A: Ile130, A: Hoh689,

conact list:


AtomAtomDistance (A)
NaO A:Arg1284.99
NaO A:Gln1294.98
NaN A:Gln1295.00
NaOE1 A:Gln1292.94
NaCB A:Gln1294.00
NaCD A:Gln1293.89
NaC A:Gln1293.79
NaCG A:Gln1294.20
NaCA A:Gln1293.69
NaO A:Ile1304.27
NaN A:Ile1302.95
NaCB A:Ile1303.66
NaCD1 A:Ile1304.91
NaC A:Ile1304.57
NaCG1 A:Ile1303.62
NaCA A:Ile1303.84
NaO A:Hoh6893.17

interactive model:


Sodium binding site 141 out of 199 in 3fiy


Sodium binding site 141 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 141 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 141 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr265, A: Pro266, A: Val267, A: Arg336, A: Hoh897, A: Hoh900,

conact list:


AtomAtomDistance (A)
NaO A:Tyr2654.01
NaCB A:Tyr2653.82
NaC A:Tyr2654.18
NaCG A:Tyr2654.90
NaCA A:Tyr2654.70
NaO A:Pro2662.89
NaN A:Pro2664.57
NaC A:Pro2663.65
NaCA A:Pro2664.77
NaO A:Val2674.65
NaN A:Val2674.03
NaCB A:Val2674.74
NaC A:Val2674.43
NaCG1 A:Val2674.70
NaCA A:Val2673.72
NaCB A:Arg3364.29
NaCD A:Arg3363.65
NaCZ A:Arg3364.00
NaCG A:Arg3363.99
NaNE A:Arg3364.25
NaNH1 A:Arg3362.97
NaO A:Hoh8974.37
NaO A:Hoh9003.72

interactive model:


Sodium binding site 142 out of 199 in 3fiy


Sodium binding site 142 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 142 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 142 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu270, A: Pro271, A: Ala272, A: Asp273, A: Hoh755,

conact list:


AtomAtomDistance (A)
NaO A:Glu2704.64
NaOE1 A:Glu2704.23
NaCB A:Glu2703.66
NaCD A:Glu2704.86
NaC A:Glu2703.97
NaCG A:Glu2704.57
NaCA A:Glu2704.26
NaN A:Pro2713.57
NaCB A:Pro2713.95
NaCD A:Pro2713.40
NaC A:Pro2714.02
NaCG A:Pro2714.17
NaCA A:Pro2714.06
NaN A:Ala2723.06
NaC A:Ala2724.92
NaCB A:Ala2723.38
NaCA A:Ala2723.82
NaN A:Asp2734.88
NaO A:Hoh7553.59

interactive model:


Sodium binding site 143 out of 199 in 3fiy


Sodium binding site 143 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 143 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 143 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu99, A: Gln100, A: Leu102, A: Asp103, A: Arg148, A: Na517,

conact list:


AtomAtomDistance (A)
NaO A:Glu992.75
NaCB A:Glu993.81
NaCD A:Glu994.98
NaC A:Glu993.54
NaCG A:Glu994.74
NaCA A:Glu993.99
NaN A:Gln1004.55
NaCA A:Gln1004.96
NaCB A:Leu1024.73
NaC A:Leu1024.94
NaN A:Asp1034.12
NaCB A:Asp1033.81
NaOD2 A:Asp1034.77
NaCG A:Asp1034.72
NaCA A:Asp1034.40
NaCZ A:Arg1483.89
NaNE A:Arg1484.08
NaNH2 A:Arg1482.91
NaNA A:Na5173.66

interactive model:


Sodium binding site 144 out of 199 in 3fiy


Sodium binding site 144 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 144 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 144 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp393, A: Asp394, A: Gln395, A: Val402, A: Asn403, A: Asp404, A: Na662, A: Hoh678, A: Hoh787,

conact list:


AtomAtomDistance (A)
NaO A:Asp3934.32
NaC A:Asp3934.86
NaN A:Asp3944.56
NaCB A:Asp3943.92
NaC A:Asp3943.81
NaOD1 A:Asp3944.16
NaCG A:Asp3944.56
NaCA A:Asp3943.43
NaO A:Gln3953.48
NaN A:Gln3953.18
NaCB A:Gln3954.83
NaC A:Gln3954.22
NaCG A:Gln3954.77
NaCA A:Gln3954.25
NaC A:Val4024.97
NaCG1 A:Val4024.30
NaO A:Asn4033.18
NaN A:Asn4034.39
NaC A:Asn4034.03
NaCA A:Asn4034.84
NaN A:Asp4044.77
NaCA A:Asp4044.83
NaNA A:Na6623.38
NaO A:Hoh6783.04
NaO A:Hoh7874.09

interactive model:


Sodium binding site 145 out of 199 in 3fiy


Sodium binding site 145 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 145 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 145 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp473, A: Val474, A: Ala476, A: Asn477, A: Na553, A: Na595, A: Hoh733,

conact list:


AtomAtomDistance (A)
NaO A:Asp4732.93
NaCB A:Asp4733.77
NaC A:Asp4733.65
NaOD1 A:Asp4734.18
NaCG A:Asp4734.29
NaCA A:Asp4733.63
NaN A:Val4744.91
NaO A:Ala4764.96
NaC A:Ala4764.31
NaCB A:Ala4763.87
NaCA A:Ala4764.62
NaN A:Asn4773.87
NaCB A:Asn4773.74
NaND2 A:Asn4774.83
NaCG A:Asn4774.62
NaCA A:Asn4774.25
NaNA A:Na5534.68
NaNA A:Na5953.33
NaO A:Hoh7334.50

interactive model:


Sodium binding site 146 out of 199 in 3fiy


Sodium binding site 146 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 146 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 146 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Lys42, A: Phe43, A: Pro44, A: Glu45, A: Asn478, A: Na589,

conact list:


AtomAtomDistance (A)
NaCB A:Lys424.63
NaCE A:Lys424.81
NaCD A:Lys423.83
NaCG A:Lys424.89
NaO A:Phe433.93
NaC A:Pro444.92
NaN A:Glu454.60
NaCB A:Glu454.76
NaCA A:Glu454.50
NaCB A:Asn4784.04
NaND2 A:Asn4783.02
NaCG A:Asn4783.98
NaNA A:Na5894.93

interactive model:


Sodium binding site 147 out of 199 in 3fiy


Sodium binding site 147 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 147 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 147 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln461, A: Arg462, A: Thr463, A: Na548, A: Na656, A: Hoh788,

conact list:


AtomAtomDistance (A)
NaNE2 A:Gln4613.51
NaOE1 A:Gln4613.18
NaCD A:Gln4613.29
NaCG A:Gln4614.05
NaO A:Arg4622.91
NaN A:Arg4624.92
NaC A:Arg4623.95
NaN A:Thr4634.51
NaCB A:Thr4634.28
NaCG2 A:Thr4634.70
NaOG1 A:Thr4633.36
NaCA A:Thr4634.22
NaNA A:Na5484.74
NaNA A:Na6564.43
NaO A:Hoh7883.74

interactive model:


Sodium binding site 148 out of 199 in 3fiy


Sodium binding site 148 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 148 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 148 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Val90, A: Ala91, A: Tyr446, A: Phe457, A: Gln460, A: Na490, A: Hoh754, A: Hoh792, A: Hoh826, A: Hoh852, A: Hoh884,

conact list:


AtomAtomDistance (A)
NaO A:Val904.85
NaCB A:Val903.68
NaCG2 A:Val904.78
NaC A:Val904.18
NaCG1 A:Val903.65
NaCA A:Val904.55
NaO A:Ala912.90
NaN A:Ala913.64
NaC A:Ala913.81
NaCA A:Ala913.98
NaCZ A:Tyr4464.79
NaOH A:Tyr4464.70
NaO A:Phe4573.55
NaCB A:Phe4573.93
NaCE2 A:Phe4574.93
NaCD2 A:Phe4573.88
NaC A:Phe4574.41
NaCG A:Phe4574.33
NaCA A:Phe4574.47
NaNE2 A:Gln4603.67
NaCD A:Gln4604.97
NaNA A:Na4903.91
NaO A:Hoh7542.96
NaO A:Hoh7923.98
NaO A:Hoh8264.29
NaO A:Hoh8524.87
NaO A:Hoh8843.18

interactive model:


Sodium binding site 149 out of 199 in 3fiy


Sodium binding site 149 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 149 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 149 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr225, A: Ala304, A: Tyr305, A: Pro306, A: Asn307, A: Na538, A: Hoh717, A: Hoh763,

conact list:


AtomAtomDistance (A)
NaO A:Thr2253.17
NaCB A:Thr2253.90
NaCG2 A:Thr2254.63
NaC A:Thr2253.85
NaCA A:Thr2253.74
NaO A:Ala3044.41
NaO A:Tyr3054.85
NaN A:Tyr3054.86
NaCB A:Tyr3054.07
NaCD2 A:Tyr3054.14
NaC A:Tyr3054.07
NaCG A:Tyr3054.62
NaCA A:Tyr3053.67
NaN A:Pro3064.12
NaCD A:Pro3063.94
NaCG A:Pro3064.32
NaN A:Asn3074.33
NaCB A:Asn3074.71
NaND2 A:Asn3073.15
NaOD1 A:Asn3074.08
NaCG A:Asn3073.76
NaNA A:Na5383.82
NaO A:Hoh7174.58
NaO A:Hoh7633.10

interactive model:


Sodium binding site 150 out of 199 in 3fiy


Sodium binding site 150 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 150 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 150 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His281, A: Glu286, A: Leu289, A: Gly373, A: Ile374, A: Thr377, A: Tyr378, A: Na599, A: Hoh671, A: Hoh744, A: Hoh779,

conact list:


AtomAtomDistance (A)
NaNE2 A:His2813.81
NaCE1 A:His2814.03
NaOE2 A:Glu2862.88
NaCD A:Glu2863.85
NaCG A:Glu2864.04
NaCD1 A:Leu2894.34
NaO A:Gly3733.80
NaC A:Gly3733.92
NaCA A:Gly3734.81
NaN A:Ile3743.88
NaCB A:Ile3744.52
NaC A:Ile3744.88
NaCG1 A:Ile3744.07
NaCA A:Ile3743.75
NaCB A:Thr3774.08
NaCG2 A:Thr3774.47
NaOG1 A:Thr3774.02
NaCE2 A:Tyr3783.70
NaCD2 A:Tyr3784.06
NaCZ A:Tyr3784.86
NaNA A:Na5993.49
NaO A:Hoh6712.91
NaO A:Hoh7444.15
NaO A:Hoh7793.12

interactive model:


Sodium binding site 151 out of 199 in 3fiy


Sodium binding site 151 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 151 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 151 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln100, A: Asp101, A: Asp103, A: Leu104, A: Gln107, A: Na546, A: Hoh788, A: Hoh830, A: Hoh904,

conact list:


AtomAtomDistance (A)
NaO A:Gln1002.71
NaOE1 A:Gln1004.58
NaCB A:Gln1003.68
NaCD A:Gln1004.96
NaC A:Gln1003.36
NaCG A:Gln1004.30
NaCA A:Gln1003.57
NaN A:Asp1014.46
NaCB A:Asp1034.32
NaC A:Asp1034.89
NaOD1 A:Asp1034.46
NaCG A:Asp1034.92
NaN A:Leu1044.27
NaCB A:Leu1044.49
NaCD1 A:Leu1043.75
NaCD2 A:Leu1044.02
NaCG A:Leu1043.37
NaCA A:Leu1044.76
NaNE2 A:Gln1074.27
NaNA A:Na5463.13
NaO A:Hoh7884.86
NaO A:Hoh8303.39
NaO A:Hoh9042.78

interactive model:


Sodium binding site 152 out of 199 in 3fiy


Sodium binding site 152 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 152 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 152 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro266, A: Val274, A: Ala277, A: Arg278,

conact list:


AtomAtomDistance (A)
NaCD A:Pro2664.76
NaCG A:Pro2664.90
NaO A:Val2742.89
NaCB A:Val2744.38
NaCG2 A:Val2744.98
NaC A:Val2743.78
NaCG1 A:Val2743.64
NaCA A:Val2743.99
NaO A:Ala2774.74
NaN A:Ala2774.88
NaC A:Ala2774.04
NaCB A:Ala2773.52
NaCA A:Ala2774.33
NaN A:Arg2783.58
NaCB A:Arg2784.09
NaCA A:Arg2784.08

interactive model:


Sodium binding site 153 out of 199 in 3fiy


Sodium binding site 153 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 153 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 153 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly192, A: Asp193, A: Gln194, A: Ile195, A: Pro196, A: Ala251, A: Gly252, A: Ser253, A: Hoh694, A: Hoh764, A: Hoh850,

conact list:


AtomAtomDistance (A)
NaO A:Gly1923.56
NaC A:Gly1924.40
NaO A:Asp1933.31
NaN A:Asp1934.40
NaCB A:Asp1934.27
NaC A:Asp1933.31
NaCA A:Asp1933.39
NaN A:Gln1944.00
NaC A:Gln1944.55
NaCA A:Gln1944.67
NaO A:Ile1953.70
NaN A:Ile1954.10
NaC A:Ile1953.72
NaCA A:Ile1954.61
NaN A:Pro1963.61
NaCB A:Pro1964.01
NaCD A:Pro1964.36
NaC A:Pro1964.74
NaCG A:Pro1964.93
NaCA A:Pro1963.50
NaO A:Ala2513.00
NaC A:Ala2514.11
NaO A:Gly2523.55
NaN A:Gly2524.66
NaC A:Gly2523.55
NaCA A:Gly2524.27
NaN A:Ser2533.66
NaCB A:Ser2533.55
NaOG A:Ser2534.15
NaCA A:Ser2533.76
NaO A:Hoh6943.19
NaO A:Hoh7644.68
NaO A:Hoh8503.86

interactive model:


Sodium binding site 154 out of 199 in 3fiy


Sodium binding site 154 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 154 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 154 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile130, A: Asn131, A: Gln132, A: Arg133, A: Na636, A: Hoh689, A: Hoh716, A: Hoh790, A: Hoh807,

conact list:


AtomAtomDistance (A)
NaO A:Ile1303.53
NaC A:Ile1304.43
NaO A:Asn1314.98
NaN A:Asn1314.54
NaCB A:Asn1314.59
NaND2 A:Asn1314.82
NaC A:Asn1313.78
NaOD1 A:Asn1314.39
NaCG A:Asn1314.40
NaCA A:Asn1313.62
NaN A:Gln1322.99
NaCB A:Gln1323.73
NaCD A:Gln1324.78
NaC A:Gln1324.88
NaCG A:Gln1323.55
NaCA A:Gln1323.94
NaN A:Arg1334.69
NaNA A:Na6364.90
NaO A:Hoh6894.43
NaO A:Hoh7163.12
NaO A:Hoh7902.98
NaO A:Hoh8074.78

interactive model:


Sodium binding site 155 out of 199 in 3fiy


Sodium binding site 155 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 155 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 155 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser126, A: Trp164, A: Asp167, A: Na596, A: Hoh770, A: Hoh782, A: Hoh848,

conact list:


AtomAtomDistance (A)
NaN A:Ser1264.91
NaCB A:Ser1263.97
NaOG A:Ser1264.17
NaN A:Trp1644.96
NaCB A:Trp1643.84
NaC A:Trp1644.62
NaCA A:Trp1643.89
NaO A:Trp1644.31
NaCB A:Asp1673.65
NaOD2 A:Asp1672.94
NaOD1 A:Asp1674.90
NaCG A:Asp1673.71
NaNA A:Na5963.24
NaO A:Hoh7703.10
NaO A:Hoh7824.36
NaO A:Hoh8484.07

interactive model:


Sodium binding site 156 out of 199 in 3fiy


Sodium binding site 156 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 156 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 156 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gly409, A: Tyr410, A: Gln412, A: Gly413, A: Hoh691, A: Hoh695, A: Hoh707, A: Hoh842, A: Hoh870, A: Hoh917,

conact list:


AtomAtomDistance (A)
NaO A:Gly4092.89
NaC A:Gly4093.75
NaCA A:Gly4093.96
NaN A:Tyr4104.95
NaNE2 A:Gln4123.48
NaCB A:Gln4124.02
NaCD A:Gln4124.23
NaC A:Gln4124.44
NaCG A:Gln4124.01
NaCA A:Gln4124.78
NaN A:Gly4133.68
NaCA A:Gly4134.04
NaO A:Hoh6913.76
NaO A:Hoh6954.66
NaO A:Hoh7074.19
NaO A:Hoh8424.47
NaO A:Hoh8702.99
NaO A:Hoh9174.11

interactive model:


Sodium binding site 157 out of 199 in 3fiy


Sodium binding site 157 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 157 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 157 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn260, A: Asn262, A: Gln284, A: Na570, A: Na586, A: Na598, A: Hoh813, A: Hoh829, A: Hoh910,

conact list:


AtomAtomDistance (A)
NaND2 A:Asn2603.75
NaND2 A:Asn2622.93
NaOD1 A:Asn2624.05
NaCG A:Asn2623.91
NaNE2 A:Gln2843.90
NaNA A:Na5703.38
NaNA A:Na5864.45
NaNA A:Na5983.26
NaO A:Hoh8134.59
NaO A:Hoh8293.22
NaO A:Hoh9104.04

interactive model:


Sodium binding site 158 out of 199 in 3fiy


Sodium binding site 158 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 158 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 158 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln243, A: Glu315, A: Gln318, A: Thr319, A: Hoh721, A: Hoh761, A: Hoh878, A: Hoh908,

conact list:


AtomAtomDistance (A)
NaNE2 A:Gln2434.19
NaO A:Glu3153.70
NaOE1 A:Glu3154.99
NaCB A:Glu3154.17
NaOE2 A:Glu3153.92
NaCD A:Glu3154.27
NaC A:Glu3154.63
NaCG A:Glu3154.45
NaCA A:Glu3154.81
NaO A:Gln3184.66
NaNE2 A:Gln3183.81
NaOE1 A:Gln3184.40
NaCB A:Gln3183.65
NaCD A:Gln3183.73
NaC A:Gln3184.06
NaCG A:Gln3183.56
NaCA A:Gln3184.49
NaN A:Thr3193.59
NaCB A:Thr3194.03
NaOG1 A:Thr3192.98
NaCA A:Thr3193.90
NaO A:Hoh7214.31
NaO A:Hoh7613.06
NaO A:Hoh8784.60
NaO A:Hoh9082.92

interactive model:


Sodium binding site 159 out of 199 in 3fiy


Sodium binding site 159 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 159 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 159 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu166, A: Gly169, A: Gly170, A: Trp171, A: Leu172, A: Tyr212, A: Pro219, A: Leu221, A: Na644, A: Hoh690,

conact list:


AtomAtomDistance (A)
NaOE1 A:Glu1663.03
NaOE2 A:Glu1663.77
NaCD A:Glu1663.72
NaO A:Gly1693.18
NaC A:Gly1694.06
NaN A:Gly1704.51
NaC A:Gly1704.53
NaCA A:Gly1704.15
NaN A:Trp1714.37
NaN A:Leu1724.37
NaCB A:Leu1724.26
NaCD1 A:Leu1723.65
NaCG A:Leu1723.74
NaCA A:Leu1724.98
NaCE2 A:Tyr2123.67
NaCD2 A:Tyr2124.95
NaCZ A:Tyr2123.73
NaOH A:Tyr2122.91
NaCG A:Pro2194.50
NaCD1 A:Leu2214.72
NaCD2 A:Leu2214.58
NaNA A:Na6444.07
NaO A:Hoh6904.89

interactive model:


Sodium binding site 160 out of 199 in 3fiy


Sodium binding site 160 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 160 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 160 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Lys83, A: Asn84, A: Asp86, A: Glu444, A: Gly445, A: Tyr446, A: Ser447,

conact list:


AtomAtomDistance (A)
NaO A:Lys833.47
NaCB A:Lys833.57
NaCD A:Lys834.74
NaC A:Lys833.77
NaCG A:Lys834.73
NaCA A:Lys834.31
NaN A:Asn844.30
NaCB A:Asn843.62
NaND2 A:Asn844.90
NaCG A:Asn844.68
NaCA A:Asn844.61
NaCB A:Asp864.87
NaOD2 A:Asp862.85
NaOD1 A:Asp864.72
NaCG A:Asp863.98
NaO A:Glu4443.01
NaC A:Glu4444.02
NaN A:Gly4454.47
NaC A:Gly4454.06
NaCA A:Gly4454.01
NaO A:Tyr4464.93
NaN A:Tyr4463.55
NaCB A:Tyr4464.97
NaC A:Tyr4464.05
NaCA A:Tyr4464.33
NaN A:Ser4473.32
NaCB A:Ser4473.31
NaOG A:Ser4473.82
NaCA A:Ser4473.81

interactive model:


Sodium binding site 161 out of 199 in 3fiy


Sodium binding site 161 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 161 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 161 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro364, A: Glu365, A: Ala417, A: Arg420, A: Na556, A: Na579, A: Hoh695, A: Hoh831,

conact list:


AtomAtomDistance (A)
NaO A:Pro3644.18
NaCB A:Pro3644.26
NaC A:Pro3643.85
NaCG A:Pro3644.25
NaCA A:Pro3644.65
NaN A:Glu3653.41
NaOE1 A:Glu3654.55
NaCB A:Glu3653.68
NaC A:Glu3654.79
NaCA A:Glu3653.37
NaCB A:Ala4174.01
NaCA A:Ala4174.60
NaCZ A:Arg4203.92
NaNE A:Arg4204.10
NaNH2 A:Arg4202.93
NaNA A:Na5563.19
NaNA A:Na5793.91
NaO A:Hoh6954.84
NaO A:Hoh8312.95

interactive model:


Sodium binding site 162 out of 199 in 3fiy


Sodium binding site 162 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 162 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 162 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn63, A: Glu64, A: Asp65, A: Hoh688, A: Hoh745, A: Hoh823, A: Hoh864,

conact list:


AtomAtomDistance (A)
NaO A:Asn634.75
NaN A:Glu644.86
NaOE1 A:Glu644.68
NaCB A:Glu643.69
NaCD A:Glu644.91
NaC A:Glu643.79
NaCG A:Glu644.08
NaCA A:Glu643.56
NaN A:Asp653.01
NaCB A:Asp654.86
NaOD1 A:Asp653.85
NaCG A:Asp654.59
NaCA A:Asp653.95
NaO A:Hoh6884.03
NaO A:Hoh7453.09
NaO A:Hoh8233.52
NaO A:Hoh8644.23

interactive model:


Sodium binding site 163 out of 199 in 3fiy


Sodium binding site 163 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 163 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 163 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg74, A: Phe75, A: Arg77, A: Ile78, A: Hoh743, A: Hoh871,

conact list:


AtomAtomDistance (A)
NaO A:Arg742.90
NaCB A:Arg744.21
NaCD A:Arg744.08
NaC A:Arg743.70
NaCG A:Arg744.80
NaNE A:Arg744.36
NaCA A:Arg744.05
NaN A:Phe754.78
NaO A:Arg774.82
NaN A:Arg774.95
NaCB A:Arg774.03
NaC A:Arg774.44
NaNE A:Arg774.66
NaCA A:Arg774.71
NaN A:Ile784.38
NaCB A:Ile784.86
NaCD1 A:Ile784.42
NaCG1 A:Ile783.64
NaCA A:Ile784.80
NaO A:Hoh7432.93
NaO A:Hoh8714.56

interactive model:


Sodium binding site 164 out of 199 in 3fiy


Sodium binding site 164 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 164 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 164 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu64, A: Asp65, A: Gly66, A: Lys67, A: Ala120, A: Arg121, A: Ile122, A: Asn131, A: Arg133, A: Gly134, A: Na563,

conact list:


AtomAtomDistance (A)
NaO A:Glu644.37
NaO A:Asp652.92
NaCB A:Asp654.66
NaC A:Asp653.84
NaCA A:Asp654.87
NaO A:Gly663.88
NaN A:Gly664.43
NaC A:Gly663.53
NaCA A:Gly664.25
NaN A:Lys673.18
NaCB A:Lys673.74
NaC A:Lys674.70
NaCG A:Lys674.73
NaCA A:Lys673.30
NaO A:Ala1204.65
NaO A:Arg1212.89
NaN A:Arg1214.81
NaCB A:Arg1213.87
NaCD A:Arg1214.99
NaC A:Arg1213.59
NaCG A:Arg1214.23
NaCA A:Arg1213.50
NaN A:Ile1224.90
NaCB A:Asn1313.93
NaND2 A:Asn1312.96
NaOD1 A:Asn1313.75
NaCG A:Asn1313.29
NaC A:Arg1334.82
NaN A:Gly1343.81
NaCA A:Gly1343.74
NaNA A:Na5633.04

interactive model:


Sodium binding site 165 out of 199 in 3fiy


Sodium binding site 165 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 165 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 165 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr375, A: Lys380, A: Asp424, A: Gly425, A: Val426, A: Hoh727, A: Hoh800,

conact list:


AtomAtomDistance (A)
NaCG2 A:Thr3753.86
NaCB A:Lys3804.26
NaCE A:Lys3804.50
NaCD A:Lys3803.87
NaCG A:Lys3804.21
NaNZ A:Lys3804.94
NaO A:Asp4244.68
NaO A:Gly4252.89
NaN A:Gly4254.93
NaC A:Gly4253.55
NaCA A:Gly4253.62
NaN A:Val4264.71
NaO A:Hoh7274.90
NaO A:Hoh8003.06

interactive model:


Sodium binding site 166 out of 199 in 3fiy


Sodium binding site 166 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 166 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 166 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser339, A: Ser340, A: Pro341, A: Gly345, A: Hoh683,

conact list:


AtomAtomDistance (A)
NaOG A:Ser3394.48
NaO A:Ser3403.02
NaC A:Ser3403.95
NaO A:Pro3414.17
NaN A:Pro3414.33
NaCB A:Pro3414.91
NaC A:Pro3414.28
NaCA A:Pro3413.80
NaCA A:Gly3454.39
NaO A:Hoh6833.02

interactive model:


Sodium binding site 167 out of 199 in 3fiy


Sodium binding site 167 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 167 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 167 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro44, A: Phe47, A: Leu422, A: Leu428, A: Arg429, A: Na583, A: Hoh680, A: Hoh887, A: Hoh903,

conact list:


AtomAtomDistance (A)
NaCB A:Pro443.82
NaCD A:Pro444.03
NaCG A:Pro443.46
NaCD1 A:Phe473.94
NaCE1 A:Phe474.52
NaCD1 A:Leu4224.50
NaCD2 A:Leu4224.51
NaCG A:Leu4224.83
NaO A:Leu4282.85
NaC A:Leu4283.96
NaO A:Arg4294.85
NaN A:Arg4294.53
NaCD A:Arg4294.44
NaCZ A:Arg4294.17
NaC A:Arg4294.83
NaNE A:Arg4294.33
NaNH2 A:Arg4294.72
NaNH1 A:Arg4294.04
NaCA A:Arg4294.16
NaNA A:Na5834.69
NaO A:Hoh6802.98
NaO A:Hoh8874.62
NaO A:Hoh9034.40

interactive model:


Sodium binding site 168 out of 199 in 3fiy


Sodium binding site 168 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 168 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 168 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Phe217, A: Met358, A: Trp360, A: Glu441, A: Trp442, A: Glu444, A: Na520, A: Hoh818, A: Hoh835, A: Hoh845,

conact list:


AtomAtomDistance (A)
NaCE2 A:Phe2174.92
NaCZ A:Phe2174.04
NaCE1 A:Phe2174.86
NaCE A:Met3583.69
NaCZ2 A:Trp3604.45
NaCH2 A:Trp3604.60
NaO A:Glu4414.69
NaOE1 A:Glu4414.88
NaOE2 A:Glu4412.80
NaCD A:Glu4413.85
NaCG A:Glu4414.30
NaCB A:Trp4424.87
NaCD1 A:Trp4424.46
NaCG A:Glu4445.00
NaNA A:Na5203.18
NaO A:Hoh8183.64
NaO A:Hoh8353.11
NaO A:Hoh8453.15

interactive model:


Sodium binding site 169 out of 199 in 3fiy


Sodium binding site 169 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 169 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 169 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr375, A: Arg376, A: Thr377, A: Gly379, A: Lys380, A: Hoh727,

conact list:


AtomAtomDistance (A)
NaO A:Thr3752.85
NaCG2 A:Thr3754.73
NaC A:Thr3753.80
NaO A:Arg3763.46
NaN A:Arg3764.14
NaCB A:Arg3764.74
NaC A:Arg3763.83
NaCA A:Arg3763.57
NaN A:Thr3774.98
NaN A:Gly3794.15
NaC A:Gly3794.42
NaCA A:Gly3793.86
NaN A:Lys3804.49
NaO A:Hoh7272.94

interactive model:


Sodium binding site 170 out of 199 in 3fiy


Sodium binding site 170 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 170 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 170 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu172, A: Ser173, A: Arg174, A: Glu175, A: Arg229, A: His233,

conact list:


AtomAtomDistance (A)
NaO A:Leu1724.08
NaC A:Leu1724.84
NaO A:Ser1734.98
NaN A:Ser1734.72
NaCB A:Ser1734.29
NaOG A:Ser1733.93
NaC A:Ser1733.78
NaCA A:Ser1733.62
NaN A:Arg1742.95
NaCB A:Arg1743.56
NaC A:Arg1744.83
NaCG A:Arg1744.98
NaCA A:Arg1743.86
NaN A:Glu1754.65
NaNH2 A:Arg2294.00
NaNE2 A:His2334.97
NaCE1 A:His2334.50

interactive model:


Sodium binding site 171 out of 199 in 3fiy


Sodium binding site 171 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 171 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 171 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile122, A: Pro124, A: Asp125, A: Gln129, A: Ile130, A: Asn131, A: Na508, A: Na574, A: Na619, A: Hoh716,

conact list:


AtomAtomDistance (A)
NaO A:Ile1224.95
NaN A:Pro1244.85
NaCB A:Pro1244.97
NaCD A:Pro1243.65
NaCG A:Pro1243.48
NaOD1 A:Asp1254.65
NaO A:Gln1293.13
NaCB A:Gln1294.02
NaC A:Gln1293.74
NaCA A:Gln1294.48
NaO A:Ile1303.77
NaN A:Ile1304.36
NaC A:Ile1303.73
NaCA A:Ile1304.51
NaN A:Asn1313.67
NaCB A:Asn1313.84
NaOD1 A:Asn1314.30
NaCG A:Asn1314.56
NaCA A:Asn1313.74
NaNA A:Na5084.04
NaNA A:Na5744.83
NaNA A:Na6194.90
NaO A:Hoh7163.10

interactive model:


Sodium binding site 172 out of 199 in 3fiy


Sodium binding site 172 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 172 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 172 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln401, A: Gln469, A: Na639, A: Hoh854, A: Hoh901,

conact list:


AtomAtomDistance (A)
NaCG A:Gln4014.78
NaNE2 A:Gln4692.97
NaOE1 A:Gln4693.63
NaCD A:Gln4693.72
NaNA A:Na6393.73
NaO A:Hoh8542.84
NaO A:Hoh9013.29

interactive model:


Sodium binding site 173 out of 199 in 3fiy


Sodium binding site 173 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 173 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 173 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro250, A: Ala251, A: Gly252, A: Ser253, A: Na527, A: Na663,

conact list:


AtomAtomDistance (A)
NaO A:Pro2503.88
NaC A:Pro2504.64
NaN A:Ala2514.68
NaC A:Ala2513.85
NaCB A:Ala2514.88
NaCA A:Ala2513.86
NaN A:Gly2522.94
NaC A:Gly2524.55
NaCA A:Gly2523.72
NaN A:Ser2534.44
NaNA A:Na5274.14
NaNA A:Na6633.28

interactive model:


Sodium binding site 174 out of 199 in 3fiy


Sodium binding site 174 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 174 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 174 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln401, A: Val402, A: Asn403, A: Leu464, A: Lys465, A: Gln466, A: Gln469, A: Na549, A: Na637, A: Hoh854, A: Hoh901,

conact list:


AtomAtomDistance (A)
NaCB A:Gln4014.26
NaCG A:Gln4014.24
NaO A:Val4024.14
NaN A:Val4024.70
NaC A:Val4024.56
NaN A:Asn4034.91
NaCB A:Asn4034.97
NaND2 A:Asn4034.40
NaOD1 A:Asn4032.86
NaCG A:Asn4033.86
NaCA A:Asn4034.89
NaO A:Leu4644.76
NaC A:Lys4654.63
NaN A:Gln4664.07
NaCB A:Gln4664.27
NaCG A:Gln4664.94
NaCA A:Gln4664.06
NaNE2 A:Gln4694.18
NaOE1 A:Gln4692.93
NaCD A:Gln4693.83
NaNA A:Na5493.17
NaNA A:Na6373.73
NaO A:Hoh8542.97
NaO A:Hoh9013.28

interactive model:


Sodium binding site 175 out of 199 in 3fiy


Sodium binding site 175 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 175 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 175 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser178, A: Arg179, A: Glu182, A: Hoh735, A: Hoh825,

conact list:


AtomAtomDistance (A)
NaO A:Ser1784.90
NaNH2 A:Arg1794.88
NaOE1 A:Glu1822.88
NaOE2 A:Glu1824.90
NaCD A:Glu1823.68
NaCG A:Glu1823.62
NaO A:Hoh7354.49
NaO A:Hoh8254.59

interactive model:


Sodium binding site 176 out of 199 in 3fiy


Sodium binding site 176 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 176 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 176 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Lys83, A: Ala357, A: Glu444, A: Lys448, A: Hoh747, A: Hoh812, A: Hoh876, A: Hoh894,

conact list:


AtomAtomDistance (A)
NaCE A:Lys834.47
NaNZ A:Lys833.00
NaO A:Ala3574.33
NaOE1 A:Glu4443.75
NaOE2 A:Glu4444.74
NaCD A:Glu4444.56
NaCE A:Lys4483.43
NaCD A:Lys4484.95
NaNZ A:Lys4483.08
NaO A:Hoh7474.70
NaO A:Hoh8124.03
NaO A:Hoh8763.46
NaO A:Hoh8943.40

interactive model:


Sodium binding site 177 out of 199 in 3fiy


Sodium binding site 177 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 177 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 177 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu104, A: Gln107, A: Leu464, A: Na656, A: Na664, A: Hoh788, A: Hoh830,

conact list:


AtomAtomDistance (A)
NaCD2 A:Leu1044.17
NaNE2 A:Gln1074.03
NaOE1 A:Gln1072.80
NaCD A:Gln1073.78
NaCB A:Leu4644.88
NaCD1 A:Leu4644.02
NaCD2 A:Leu4644.58
NaCG A:Leu4643.81
NaNA A:Na6563.35
NaNA A:Na6644.94
NaO A:Hoh7883.42
NaO A:Hoh8303.25

interactive model:


Sodium binding site 178 out of 199 in 3fiy


Sodium binding site 178 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 178 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 178 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ala61, A: Trp62, A: Asn63, A: Glu64, A: Asp89, A: Na506, A: Na541, A: Hoh791, A: Hoh851,

conact list:


AtomAtomDistance (A)
NaO A:Ala614.80
NaN A:Ala614.33
NaC A:Ala613.98
NaCB A:Ala614.78
NaCA A:Ala613.68
NaN A:Trp623.89
NaCD1 A:Trp623.88
NaC A:Trp624.99
NaCG A:Trp624.74
NaCA A:Trp624.85
NaNE1 A:Trp624.25
NaN A:Asn634.10
NaCB A:Asn634.98
NaND2 A:Asn632.74
NaC A:Asn634.82
NaOD1 A:Asn634.51
NaCG A:Asn633.93
NaCA A:Asn634.85
NaN A:Glu644.65
NaOE1 A:Glu644.73
NaCB A:Glu644.61
NaOE2 A:Glu642.79
NaCD A:Glu643.50
NaCG A:Glu643.38
NaO A:Asp894.69
NaNA A:Na5064.90
NaNA A:Na5413.05
NaO A:Hoh7914.68
NaO A:Hoh8513.89

interactive model:


Sodium binding site 179 out of 199 in 3fiy


Sodium binding site 179 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 179 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 179 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile71, A: Leu161, A: Glu166, A: Gly170, A: Trp171, A: Tyr212, A: Pro219, A: Na624,

conact list:


AtomAtomDistance (A)
NaCD1 A:Ile714.78
NaCD2 A:Leu1613.32
NaCG A:Leu1614.70
NaOE1 A:Glu1664.28
NaOE2 A:Glu1662.79
NaCD A:Glu1663.89
NaC A:Gly1703.97
NaCA A:Gly1703.67
NaN A:Trp1713.26
NaCB A:Trp1714.10
NaCD1 A:Trp1713.16
NaCD2 A:Trp1714.82
NaCG A:Trp1713.82
NaCA A:Trp1714.30
NaCE2 A:Trp1714.85
NaNE1 A:Trp1713.92
NaCZ A:Tyr2123.92
NaCE1 A:Tyr2124.31
NaOH A:Tyr2122.76
NaCB A:Pro2194.91
NaCD A:Pro2194.29
NaCG A:Pro2194.29
NaNA A:Na6244.07

interactive model:


Sodium binding site 180 out of 199 in 3fiy


Sodium binding site 180 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 180 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 180 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr98, A: Glu99, A: Arg140, A: Leu141, A: Glu143, A: Gly144, A: Na648, A: Hoh731, A: Hoh762,

conact list:


AtomAtomDistance (A)
NaCE2 A:Tyr984.88
NaOE2 A:Glu994.88
NaO A:Arg1402.84
NaCB A:Arg1404.36
NaC A:Arg1403.78
NaCG A:Arg1404.95
NaCA A:Arg1404.07
NaN A:Leu1414.97
NaO A:Glu1434.67
NaN A:Glu1434.96
NaOE1 A:Glu1434.30
NaCB A:Glu1433.86
NaC A:Glu1434.00
NaCA A:Glu1434.49
NaN A:Gly1443.38
NaCA A:Gly1443.65
NaNA A:Na6483.19
NaO A:Hoh7313.01
NaO A:Hoh7623.02

interactive model:


Sodium binding site 181 out of 199 in 3fiy


Sodium binding site 181 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 181 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 181 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg174, A: Glu175, A: Ala177, A: Ser178, A: Leu236, A: Gln240, A: Na658, A: Hoh709, A: Hoh866,

conact list:


AtomAtomDistance (A)
NaO A:Arg1742.90
NaCB A:Arg1744.85
NaCD A:Arg1744.66
NaC A:Arg1743.79
NaCG A:Arg1743.94
NaNE A:Arg1744.41
NaCA A:Arg1744.81
NaO A:Glu1754.66
NaN A:Glu1754.37
NaOE1 A:Glu1754.16
NaC A:Glu1754.56
NaCA A:Glu1754.21
NaN A:Ala1774.46
NaC A:Ala1774.19
NaCB A:Ala1773.61
NaCA A:Ala1774.32
NaN A:Ser1783.56
NaCB A:Ser1783.86
NaOG A:Ser1782.91
NaCA A:Ser1784.18
NaCD2 A:Leu2364.16
NaCG A:Leu2364.87
NaNE2 A:Gln2403.87
NaOE1 A:Gln2402.94
NaCD A:Gln2403.77
NaNA A:Na6584.31
NaO A:Hoh7092.98
NaO A:Hoh8664.73

interactive model:


Sodium binding site 182 out of 199 in 3fiy


Sodium binding site 182 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 182 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 182 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp456, A: Thr459, A: Gln461, A: Hoh720, A: Hoh819, A: Hoh824,

conact list:


AtomAtomDistance (A)
NaCB A:Asp4563.87
NaOD2 A:Asp4563.22
NaOD1 A:Asp4564.58
NaCG A:Asp4563.71
NaCB A:Thr4593.82
NaCG2 A:Thr4593.75
NaOG1 A:Thr4592.91
NaOE1 A:Gln4614.46
NaCB A:Gln4613.54
NaCD A:Gln4614.37
NaCG A:Gln4613.83
NaCA A:Gln4614.90
NaO A:Hoh7204.44
NaO A:Hoh8194.05
NaO A:Hoh8243.38

interactive model:


Sodium binding site 183 out of 199 in 3fiy


Sodium binding site 183 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 183 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 183 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr98, A: Glu99, A: Arg140, A: Na645, A: Hoh731, A: Hoh762,

conact list:


AtomAtomDistance (A)
NaCE2 A:Tyr983.87
NaCZ A:Tyr983.71
NaCE1 A:Tyr984.93
NaOH A:Tyr982.80
NaOE1 A:Glu994.30
NaOE2 A:Glu993.03
NaCD A:Glu993.63
NaCG A:Glu994.22
NaO A:Arg1404.87
NaCB A:Arg1404.45
NaCD A:Arg1404.48
NaCG A:Arg1404.64
NaNA A:Na6453.19
NaO A:Hoh7313.97
NaO A:Hoh7624.58

interactive model:


Sodium binding site 184 out of 199 in 3fiy


Sodium binding site 184 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 184 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 184 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu292, A: Ile293, A: Ser321, A: Ala322, A: Pro323, A: Ile324, A: Na483, A: Na545,

conact list:


AtomAtomDistance (A)
NaO A:Leu2922.95
NaCB A:Leu2924.90
NaC A:Leu2923.91
NaCA A:Leu2924.81
NaN A:Ile2934.63
NaCD1 A:Ile2934.00
NaCA A:Ile2934.57
NaO A:Ser3213.54
NaC A:Ser3214.02
NaCA A:Ser3214.56
NaO A:Ala3222.97
NaN A:Ala3224.66
NaC A:Ala3223.69
NaCA A:Ala3224.85
NaO A:Pro3234.98
NaN A:Pro3233.99
NaCB A:Pro3234.83
NaC A:Pro3233.90
NaCA A:Pro3233.59
NaN A:Ile3243.42
NaCB A:Ile3244.25
NaCD1 A:Ile3244.43
NaCG2 A:Ile3243.90
NaCG1 A:Ile3243.81
NaCA A:Ile3244.42
NaNA A:Na4833.51
NaNA A:Na5454.30

interactive model:


Sodium binding site 185 out of 199 in 3fiy


Sodium binding site 185 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 185 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 185 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu352, A: Ser353, A: Pro354, A: Val355, A: Hoh702, A: Hoh772, A: Hoh789, A: Hoh899,

conact list:


AtomAtomDistance (A)
NaO A:Glu3523.90
NaC A:Glu3524.76
NaN A:Ser3534.79
NaCB A:Ser3533.80
NaOG A:Ser3533.48
NaC A:Ser3534.78
NaCA A:Ser3533.84
NaO A:Pro3544.98
NaN A:Pro3544.59
NaCB A:Pro3544.44
NaC A:Pro3543.77
NaCA A:Pro3543.55
NaO A:Val3553.64
NaN A:Val3553.03
NaCB A:Val3554.43
NaCG2 A:Val3553.72
NaC A:Val3554.26
NaCG1 A:Val3554.94
NaCA A:Val3554.03
NaO A:Hoh7023.28
NaO A:Hoh7724.36
NaO A:Hoh7893.05
NaO A:Hoh8994.03

interactive model:


Sodium binding site 186 out of 199 in 3fiy


Sodium binding site 186 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 186 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 186 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln240, A: Gln243, A: Thr319, A: Hoh721, A: Hoh825, A: Hoh866,

conact list:


AtomAtomDistance (A)
NaNE2 A:Gln2404.61
NaOE1 A:Gln2404.54
NaCB A:Gln2404.81
NaCD A:Gln2404.19
NaCG A:Gln2403.92
NaNE2 A:Gln2433.97
NaOE1 A:Gln2432.88
NaCD A:Gln2433.80
NaCB A:Thr3194.91
NaCG2 A:Thr3194.38
NaOG1 A:Thr3194.19
NaO A:Hoh7213.40
NaO A:Hoh8254.87
NaO A:Hoh8663.12

interactive model:


Sodium binding site 187 out of 199 in 3fiy


Sodium binding site 187 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 187 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 187 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ala272, A: Asp273, A: Glu275, A: Ala276, A: Arg279, A: Ser339, A: Gly345, A: Hoh725,

conact list:


AtomAtomDistance (A)
NaO A:Ala2722.82
NaC A:Ala2723.66
NaCB A:Ala2724.12
NaCA A:Ala2723.84
NaN A:Asp2734.88
NaN A:Glu2754.99
NaCB A:Glu2753.81
NaC A:Glu2754.30
NaCG A:Glu2753.86
NaCA A:Glu2754.58
NaN A:Ala2763.65
NaCB A:Ala2763.95
NaCA A:Ala2764.08
NaCZ A:Arg2794.21
NaNE A:Arg2794.70
NaNH1 A:Arg2792.97
NaCB A:Ser3393.64
NaOG A:Ser3393.08
NaCA A:Ser3394.60
NaO A:Gly3454.57
NaO A:Hoh7254.66

interactive model:


Sodium binding site 188 out of 199 in 3fiy


Sodium binding site 188 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 188 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 188 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg148, A: Asp149, A: Hoh805, A: Hoh913, A: Hoh914,

conact list:


AtomAtomDistance (A)
NaO A:Arg1483.84
NaC A:Arg1484.20
NaCA A:Arg1484.90
NaN A:Asp1494.58
NaCB A:Asp1493.55
NaOD2 A:Asp1492.68
NaOD1 A:Asp1494.68
NaCG A:Asp1493.49
NaCA A:Asp1494.68
NaO A:Hoh8052.88
NaO A:Hoh9133.13
NaO A:Hoh9142.74

interactive model:


Sodium binding site 189 out of 199 in 3fiy


Sodium binding site 189 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 189 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 189 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln350, A: Val351, A: Glu352, A: Val355, A: Gly359, A: Hoh815, A: Hoh821,

conact list:


AtomAtomDistance (A)
NaNE2 A:Gln3503.48
NaCB A:Gln3504.35
NaCD A:Gln3504.63
NaC A:Gln3504.95
NaCG A:Gln3504.90
NaCA A:Gln3504.99
NaO A:Val3512.89
NaN A:Val3514.24
NaC A:Val3513.99
NaCA A:Val3514.76
NaN A:Glu3524.92
NaCA A:Glu3524.99
NaCG1 A:Val3554.63
NaO A:Gly3592.88
NaC A:Gly3593.80
NaCA A:Gly3594.00
NaO A:Hoh8154.11
NaO A:Hoh8215.00

interactive model:


Sodium binding site 190 out of 199 in 3fiy


Sodium binding site 190 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 190 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 190 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Val267, A: Ser268, A: Glu270, A: Asp273, A: Lys338, A: Hoh755, A: Hoh757,

conact list:


AtomAtomDistance (A)
NaCG2 A:Val2673.89
NaCB A:Ser2684.20
NaOG A:Ser2683.93
NaOE1 A:Glu2704.15
NaOE2 A:Glu2704.31
NaCD A:Glu2704.39
NaOD2 A:Asp2732.87
NaOD1 A:Asp2734.02
NaCG A:Asp2733.83
NaCB A:Lys3384.57
NaCE A:Lys3383.38
NaCD A:Lys3384.79
NaNZ A:Lys3383.41
NaO A:Hoh7554.57
NaO A:Hoh7573.38

interactive model:


Sodium binding site 191 out of 199 in 3fiy


Sodium binding site 191 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 191 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 191 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg462, A: Thr463, A: Leu464, A: Na612, A: Na642, A: Hoh788, A: Hoh803,

conact list:


AtomAtomDistance (A)
NaO A:Arg4624.66
NaO A:Thr4634.97
NaN A:Thr4634.86
NaCB A:Thr4634.27
NaCG2 A:Thr4633.72
NaOG1 A:Thr4634.80
NaC A:Thr4633.79
NaCA A:Thr4633.68
NaO A:Leu4644.26
NaN A:Leu4643.01
NaCB A:Leu4643.77
NaCD1 A:Leu4644.62
NaC A:Leu4644.62
NaCG A:Leu4643.86
NaCA A:Leu4643.93
NaNA A:Na6124.43
NaNA A:Na6423.35
NaO A:Hoh7884.29
NaO A:Hoh8033.21

interactive model:


Sodium binding site 192 out of 199 in 3fiy


Sodium binding site 192 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 192 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 192 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ala181, A: Gln240, A: Ala241, A: Gln243, A: Ala244, A: Hoh825, A: Hoh843,

conact list:


AtomAtomDistance (A)
NaCB A:Ala1813.91
NaO A:Gln2402.90
NaNE2 A:Gln2404.89
NaCB A:Gln2404.16
NaC A:Gln2403.81
NaCA A:Gln2404.14
NaN A:Ala2414.96
NaOE1 A:Gln2434.23
NaCB A:Gln2434.06
NaC A:Gln2434.43
NaCA A:Gln2434.80
NaN A:Ala2443.81
NaCB A:Ala2443.97
NaCA A:Ala2444.15
NaO A:Hoh8253.01
NaO A:Hoh8433.16

interactive model:


Sodium binding site 193 out of 199 in 3fiy


Sodium binding site 193 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 193 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 193 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu175, A: Ser178, A: Na646, A: Na659, A: Hoh709,

conact list:


AtomAtomDistance (A)
NaOE1 A:Glu1752.94
NaOE2 A:Glu1754.00
NaCD A:Glu1753.86
NaCB A:Ser1783.82
NaOG A:Ser1782.93
NaNA A:Na6464.31
NaNA A:Na6594.12
NaO A:Hoh7093.58

interactive model:


Sodium binding site 194 out of 199 in 3fiy


Sodium binding site 194 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 194 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 194 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg128, A: Glu175, A: Arg179, A: Glu182, A: Na658, A: Hoh666, A: Hoh735,

conact list:


AtomAtomDistance (A)
NaNH1 A:Arg1284.93
NaOE1 A:Glu1754.39
NaOE2 A:Glu1752.94
NaCD A:Glu1754.03
NaCZ A:Arg1793.92
NaNH2 A:Arg1793.03
NaNH1 A:Arg1794.00
NaOE1 A:Glu1824.69
NaNA A:Na6584.12
NaO A:Hoh6664.99
NaO A:Hoh7353.01

interactive model:


Sodium binding site 195 out of 199 in 3fiy


Sodium binding site 195 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 195 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 195 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr265, A: Glu365, A: Asp369, A: Na552, A: Hoh785,

conact list:


AtomAtomDistance (A)
NaCE2 A:Tyr2654.21
NaCZ A:Tyr2654.45
NaOH A:Tyr2653.99
NaO A:Glu3654.95
NaCB A:Glu3653.99
NaCD A:Glu3654.98
NaCG A:Glu3653.80
NaOD2 A:Asp3692.96
NaOD1 A:Asp3694.15
NaCG A:Asp3693.94
NaNA A:Na5523.55
NaO A:Hoh7854.43

interactive model:


Sodium binding site 196 out of 199 in 3fiy


Sodium binding site 196 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 196 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 196 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn84, A: Na601, A: Hoh893,

conact list:


AtomAtomDistance (A)
NaO A:Asn843.03
NaCB A:Asn844.63
NaND2 A:Asn843.69
NaC A:Asn844.00
NaOD1 A:Asn843.15
NaCG A:Asn843.55
NaCA A:Asn844.51
NaNA A:Na6013.31
NaO A:Hoh8933.54

interactive model:


Sodium binding site 197 out of 199 in 3fiy


Sodium binding site 197 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 197 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 197 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln395, A: Pro396, A: Asp397, A: Gln401, A: Val402, A: Asn403, A: Na609, A: Hoh787, A: Hoh886,

conact list:


AtomAtomDistance (A)
NaO A:Gln3952.98
NaC A:Gln3954.18
NaN A:Pro3964.89
NaC A:Pro3964.47
NaCA A:Pro3964.63
NaN A:Asp3974.14
NaCB A:Asp3974.40
NaOD2 A:Asp3974.88
NaCG A:Asp3974.90
NaCA A:Asp3974.70
NaO A:Gln4013.49
NaC A:Gln4014.34
NaN A:Val4024.49
NaCB A:Val4024.85
NaC A:Val4023.82
NaCG1 A:Val4024.78
NaCA A:Val4023.74
NaO A:Asn4033.64
NaN A:Asn4032.96
NaCB A:Asn4033.95
NaND2 A:Asn4034.45
NaC A:Asn4034.14
NaCG A:Asn4034.61
NaCA A:Asn4033.84
NaNA A:Na6093.38
NaO A:Hoh7874.06
NaO A:Hoh8863.97

interactive model:


Sodium binding site 198 out of 199 in 3fiy


Sodium binding site 198 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 198 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 198 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro250, A: Gly252, A: Ser253, A: Gln254, A: Na527, A: Na638, A: Hoh875,

conact list:


AtomAtomDistance (A)
NaO A:Pro2504.88
NaO A:Gly2524.22
NaN A:Gly2524.13
NaC A:Gly2523.62
NaCA A:Gly2523.78
NaO A:Ser2532.99
NaN A:Ser2533.50
NaC A:Ser2533.71
NaCA A:Ser2534.18
NaN A:Gln2544.66
NaCG A:Gln2544.24
NaNA A:Na5273.98
NaNA A:Na6383.28
NaO A:Hoh8753.03

interactive model:


Sodium binding site 199 out of 199 in 3fiy


Sodium binding site 199 out of 199 in 3fiy
Click to enlarge
stereopicture of Sodium binding site 199 out of 199 in 3fiy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 199 of Sodium in the PDB 3fiy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu464, A: Gln469, A: Arg472, A: Na15, A: Na642,

conact list:


AtomAtomDistance (A)
NaCB A:Leu4644.98
NaCD1 A:Leu4643.69
NaCG A:Leu4644.73
NaNE2 A:Gln4693.64
NaCD A:Gln4694.59
NaCG A:Gln4694.55
NaCZ A:Arg4724.15
NaNH2 A:Arg4723.07
NaNH1 A:Arg4724.36
NaNA A:Na154.40
NaNA A:Na6424.94

interactive model:




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