Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
      1jz2
      1jz3
      1jz4
      1jz5
      1jz6
      1jz7
      1jz8
      1jzn
      1k21
      1k22
      1k2x
      1k3u
      1k4d
      1k73
      1k7e
      1k7x
      1k8a
      1k8p
      1k8x
      1k8y
      1k8z
      1k9m
      1ka0
      1kc6
      1kc8
      1kcc
      1kd1
      1kdh
      1kej
      1kfc
      1kfe
      1kfj
      1kfk
      1khf
      1kj8
      1kj9
      1kji
      1kjj
      1kjq
      1kjt
      1knp
      1knr
      1kqs
      1kr3
      1kss
      1ksu
      1ktw
      1kvq
      1kvr
      1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 8 (351-400), PDB files 1jz2 - 1kvs






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 351-400 (1jz2 - 1kvs):
  1. 1jz2 - E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl- Enzyme Intermediate (Orthorhombic)
  2. 1jz3 - E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy- Galactosyl Enzyme Intermediate
  3. 1jz4 - E. Coli (Lacz) Beta-Galactosidase-Trapped 2-Deoxy- Galactosyl-Enzyme Intermediate (Low Bis-Tris)
  4. 1jz5 - E. Coli (Lacz) Beta-Galactosidase in Complex With D-Galctopyranosyl-1- on
  5. 1jz6 - E. Coli (Lacz) Beta-Galactosidase in Complex With Galacto- Tetrazole
  6. 1jz7 - E. Coli (Lacz) Beta-Galactosidase in Complex With Galactose
  7. 1jz8 - E. Coli (Lacz) Beta-Galactosidase (E537Q) in Complex With Allolactose
  8. 1jzn - Crystal Structure of A Galactose-Specific C-Type Lectin
  9. 1k21 - Human Thrombin-Inhibitor Complex
  10. 1k22 - Human Thrombin-Inhibitor Complex
  11. 1k2x - Crystal Structure of Putative Asparaginase Encoded By Escherichia Coli Ybik Gene
  12. 1k3u - Crystal Structure of Wild-Type Tryptophan Synthase Complexed With N- [1H-Indol-3-Yl-Acetyl]Aspartic Acid
  13. 1k4d - Potassium Channel Kcsa-Fab Complex in Low Concentration of K+
  14. 1k73 - Co-Crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
  15. 1k7e - Crystal Structure of Wild-Type Tryptophan Synthase Complexed With N- [1H-Indol-3-Yl-Acetyl]Glycine Acid
  16. 1k7x - Crystal Structure Of the Beta-SER178PRO Mutant of Tryptophan Synthase
  17. 1k8a - Co-Crystal Structure Of Carbomycin A Bound to the 50S Ribosomal Subunit of Haloarcula Marismortui
  18. 1k8p - Structure of the Human G-Quadruplex Reveals A Novel Topology
  19. 1k8x - Crystal Structure Of ALPHAT183V Mutant of Tryptophan Synthase From Salmonella Typhimurium
  20. 1k8y - Crystal Structure of the Tryptophan Synthase Beta-SER178PRO Mutant Complexed With D,L-Alpha-Glycerol-3-Phosphate
  21. 1k8z - Crystal Structure of the Tryptophan Synthase Beta-SER178PRO Mutant Complexed With N-[1H-Indol-3-Yl-Acetyl]Glycine Acid
  22. 1k9m - Co-Crystal Structure Of Tylosin Bound to the 50S Ribosomal Subunit of Haloarcula Marismortui
  23. 1ka0 - The Papase HAL2P Complexed With A Sodium Ion and the Reaction Product Amp
  24. 1kc6 - Hincii Bound to Cognate Dna
  25. 1kc8 - Co-Crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
  26. 1kcc - Endopolygalacturonase I From Stereum Purpureum Complexed With A Galacturonate At 1.00 A Resolution.
  27. 1kd1 - Co-Crystal Structure Of Spiramycin Bound to the 50S Ribosomal Subunit of Haloarcula Marismortui
  28. 1kdh - Binary Complex of Murine Terminal Deoxynucleotidyl Transferase With A Primer Single Stranded Dna
  29. 1kej - Crystal Structure of Murine Terminal Deoxynucleotidyl Transferase Complexed With Ddatp
  30. 1kfc - Crystal Structure Of ALPHAT183V Mutant of Tryptophan Synthase From Salmonella Typhimurium With Indole Propanol Phosphate
  31. 1kfe - Crystal Structure Of ALPHAT183V Mutant of Tryptophan Synthase From Salmonella Typhimurium With L-Ser Bound to the Beta Site
  32. 1kfj - Crystal Structure of Wild-Type Tryptophan Synthase Complexed With L-Serine
  33. 1kfk - Crystal Structure of Tryptophan Synthase From Salmonella Typhimurium
  34. 1khf - Pepck Complex With Pep
  35. 1kj8 - Crystal Structure of Purt-Encoded Glycinamide Ribonucleotide Transformylase in Complex With Mg-Atp and Gar
  36. 1kj9 - Crystal Structure of Purt-Encoded Glycinamide Ribonucleotide Transformylase Complexed With Mg-Atp
  37. 1kji - Crystal Structure of Glycinamide Ribonucleotide Transformylase in Complex With Mg-Amppcp
  38. 1kjj - Crystal Structure of Glycniamide Ribonucleotide Transformylase in Complex With Mg-Atp-Gamma-S
  39. 1kjq - Crystal Structure of Glycinamide Ribonucleotide Transformylase in Complex With Mg-Adp
  40. 1kjt - Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap
  41. 1knp - E. Coli L-Aspartate Oxidase: Mutant R386L in Complex With Succinate
  42. 1knr - L-Aspartate Oxidase: R386L Mutant
  43. 1kqs - The Haloarcula Marismortui 50S Complexed With A Pretranslocational Intermediate in Protein Synthesis
  44. 1kr3 - Crystal Structure of The Metallo Beta-Lactamase From Bacteroides Fragilis (Cfia) in Complex With the Tricyclic Inhibitor Sb-236050.
  45. 1kss - Crystal Structure of HIS505ALA Mutant Flavocytochrome C3 From Shewanella Frigidimarina
  46. 1ksu - Crystal Structure of HIS505TYR Mutant Flavocytochrome C3 From Shewanella Frigidimarina
  47. 1ktw - Iota-Carrageenase Complexed to Iota-Carrageenan Fragments
  48. 1kvq - Udp-Galactose 4-Epimerase Complexed With Udp-Phenol
  49. 1kvr - Udp-Galactose 4-Epimerase Complexed With Udp-Phenol
  50. 1kvs - Udp-Galactose 4-Epimerase Complexed With Udp-Phenol


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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