Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 3151-3200 (4gdt - 8icw):- 4gdt - Crystal Structure of Malonate-Bound Human L-Asparaginase Protein
- 4gdu - Crystal Structure of Sulfate-Bound Human L-Asparaginase Protein
- 4gdv - Crystal Structure of Partially-Cleaved Human L-Asparaginase Protein in Complex With L-Aspartate
- 4gdw - Crystal Structure of Fully-Cleaved Human L-Asparaginase Protein in Complex With L-Aspartate
- 4gib - 2.27 Angstrom Crystal Structure of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile
- 4mat - E.Coli Methionine Aminopeptidase HIS79ALA Mutant
- 4mt2 - Comparison Of The uc(Nmr) Solution Structure and the X-Ray Crystal Structure of Rat Metallothionein-2
- 4znb - Metallo-Beta-Lactamase (C181S Mutant)
- 7gep - Sulfite Reductase Hemoprotein in Complex With A Partially Oxidized Sulfide Species
- 7ice - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of CACL2
- 7icf - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Six Base Pairs Of Dna; Soaked in the Presence of CDCL2 (0.1 Millimolar) (Four-Day Soak)
- 7icg - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of CDCL2
- 7ich - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of COCL2
- 7ici - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Six Base Pairs Of Dna; Soaked in the Presence of CRCL3 (0.1 Millimolar)
- 7icj - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Six Base Pairs Of Dna; Soaked in the Presence of CUCL2 (0.1 Millimolar)
- 7ick - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of MGCL2
- 7icl - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Six Base Pairs Of Dna; Soaked in the Presence of MNCL2 (0.1 Millimolar)
- 7icm - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Six Base Pairs Of Dna; Soaked in the Presence of MNCL2 (1.0 Millimolar)
- 7icn - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of NICL2
- 7ico - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of ZNCL2
- 7icp - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Six Base Pairs Of Dna; Soaked in the Presence of ZNCL2 (0.01 Millimolar)
- 7icq - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of ZNCL2
- 7icr - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of ZNCL2
- 7ics - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of ZNCL2
- 7ict - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of ZNCL2 and MGCL2
- 7icu - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Six Base Pairs Of Dna; Soaked in the Presence of CDCL2 (0.1 Millimolar)
- 7icv - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Six Base Pairs Of Dna; Soaked In The Presence Of MNCL2 (0.1 Millimolar) and in the Absence of Nacl
- 7kme - Crystal Structure of Human Alpha-Thrombin Inhibited With SEL2711.
- 8ica - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Datp (1 Millimolar) and CACL2 (5 Millimolar)
- 8icb - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Artificial Mother Liquor
- 8icc - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs of Dna (No 5'-Phosphate)
- 8ice - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Datp (1 Millimolar) and CDCL2 (1 Millimolar)
- 8icf - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Datp (10 Millimolar) and MGCL2 (50 Millimolar)
- 8icg - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Datp (1 Millimolar) and MGCL2 (5 Millimolar)
- 8ich - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Dctp (1 Millimolar) and MGCL2 (5 Millimolar)
- 8ici - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Dgtp (1 Millimolar) and MGCL2 (5 Millimolar)
- 8icj - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex + Thymidine- 5'-Triphosphate, Soaked in the Presence of Dttp and MGCL2
- 8ick - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Datp (1 Millimolar), MGCL2 (5 Millimolar), and MNCL2 (5 Millimolar)
- 8icl - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Datp (1 Millimolar) and NICL2 (5 Millimolar)
- 8icm - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Datp (1 Millimolar), MNCL2 (5 Millimolar), and Ammonium Sulfate (75 Millimolar)
- 8icn - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Atp (1 Millimolar) and MNCL2 (5 Millimolar)
- 8ico - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Azt-Tp (1 Millimolar) and MNCL2 (5 Millimolar)
- 8icp - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
- 8icq - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence Of of Datp (0.1 Millimolar) and MNCL2 (0.5 Millimolar)
- 8icr - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Datp (1 Millimolar) and MNCL2 (5 Millimolar)
- 8ics - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Dctp (1 Millimolar) and MNCL2 (5 Millimolar)
- 8ict - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Dctp (1 Millimolar) and MNCL2 (5 Millimolar)
- 8icu - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Ddatp (1 Millimolar) and MNCL2 (5 Millimolar)
- 8icv - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Dgtp (1 Millimolar) and MNCL2 (5 Millimolar)
- 8icw - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With Seven Base Pairs Of Dna; Soaked in the Presence of Dttp (1 Millimolar) and MNCL2 (5 Millimolar)
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| We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com. |