Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
      1ikq
      1in0
      1inu
      1ioc
      1ip1
      1ip2
      1ip3
      1ip4
      1ip5
      1ip6
      1ip7
      1iue
      1ix0
      1iyn
      1j6s
      1j70
      1j8g
      1j9m
      1jax
      1jay
      1jb7
      1jec
      1jed
      1jee
      1jg2
      1jg3
      1jg8
      1jgm
      1jj2
      1jju
      1jlj
      1jmm
      1jmo
      1jms
      1jn9
      1jou
      1jrx
      1jry
      1jrz
      1jtp
      1jtt
      1jtw
      1jyn
      1jyv
      1jyw
      1jyx
      1jyy
      1jyz
      1jz0
      1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 7 (301-350), PDB files 1ikq - 1jz1






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 301-350 (1ikq - 1jz1):
  1. 1ikq - Pseudomonas Aeruginosa Exotoxin A, Wild Type
  2. 1in0 - Yajq Protein (HI1034)
  3. 1inu - Crystal Structure of Mutant Human Lysozyme Substituted At the Surface Positions
  4. 1ioc - Crystal Structure of Mutant Human Lysozyme, Eaea-I56T
  5. 1ip1 - G37A Human Lysozyme
  6. 1ip2 - G48A Human Lysozyme
  7. 1ip3 - G68A Human Lysozyme
  8. 1ip4 - G72A Human Lysozyme
  9. 1ip5 - G105A Human Lysozyme
  10. 1ip6 - G127A Human Lysozyme
  11. 1ip7 - G129A Human Lysozyme
  12. 1iue - Crystal Structure Analysis of Ferredoxin From Plasmodium Falciparum
  13. 1ix0 - I59A-3SS Human Lysozyme
  14. 1iyn - Crystal Structure of Chloroplastic Ascorbate Peroxidase From Tobacco Plants and Structural Insights For Its Instability
  15. 1j6s - Crystal Structure of An Rna Tetraplex (Ugaggu)4 With A- Tetrads, G-Tetrads, U-Tetrads and G-U Octads
  16. 1j70 - Crystal Structure of Yeast Atp Sulfurylase
  17. 1j8g - X-Ray Analysis of A Rna Tetraplex R(Uggggu)4 At Ultra-High Resolution
  18. 1j9m - K38H Mutant of Streptomyces K15 Dd-Transpeptidase
  19. 1jax - Structure of Coenzyme F420H2:Nadp+ Oxidoreductase (Fno)
  20. 1jay - Structure of Coenzyme F420H2:Nadp+ Oxidoreductase (Fno) With Its Substrates Bound
  21. 1jb7 - Dna G-Quartets in A 1.86 A Resolution Structure of An Oxytricha Nova Telomeric Protein-Dna Complex
  22. 1jec - Crystal Structure of Atp Sulfurylase in Complex With Thiosulfate
  23. 1jed - Crystal Structure of Atp Sulfurylase in Complex With Adp
  24. 1jee - Crystal Structure of Atp Sulfurylase in Complex With Chlorate
  25. 1jg2 - Crystal Structure of L-Isoaspartyl (D-Aspartyl) O- Methyltransferase With Adenosine
  26. 1jg3 - Crystal Structure of L-Isoaspartyl (D-Aspartyl) O-Methyltransferase With Adenosine & Vyp(Isp)Ha Substrate
  27. 1jg8 - Crystal Structure of Threonine Aldolase (Low-Specificity)
  28. 1jgm - High Resolution Structure of the Cadmium-Containing Phosphotriesterase From Pseudomonas Diminuta
  29. 1jj2 - Fully Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution
  30. 1jju - Structure of A Quinohemoprotein Amine Dehydrogenase With A Unique Redox Cofactor and Highly Unusual Crosslinking
  31. 1jlj - 1.6 Angstrom Crystal Structure of the Human Neuroreceptor Anchoring and Molybdenum Cofactor Biosynthesis Protein Gephyrin
  32. 1jmm - Crystal Structure Of the V-Region of Streptococcus Mutans Antigen I/II
  33. 1jmo - Crystal Structure of the Heparin Cofactor II-S195A Thrombin Complex
  34. 1jms - Crystal Structure Of the Catalytic Core of Murine Terminal Deoxynucleotidyl Transferase
  35. 1jn9 - Structure of Putative Asparaginase Encoded By Escherichia Coli Ybik Gene
  36. 1jou - Crystal Structure of Native S195A Thrombin With An Unoccupied Active Site
  37. 1jrx - Crystal Structure of ARG402ALA Mutant Flavocytochrome C3 From Shewanella Frigidimarina
  38. 1jry - Crystal Structure of ARG402LYS Mutant Flavocytochrome C3 From Shewanella Frigidimarina
  39. 1jrz - Crystal Structure of ARG402TYR Mutant Flavocytochrome C3 From Shewanella Frigidimarina
  40. 1jtp - Degenerate Interfaces in Antigen-Antibody Complexes
  41. 1jtt - Degenerate Interfaces in Antigen-Antibody Complexes
  42. 1jtw - Structure of SL4 Rna From the Hiv-1 Packaging Signal
  43. 1jyn - E. Coli (Lacz) Beta-Galactosidase (E537Q) in Complex With Lactose
  44. 1jyv - E. Coli (Lacz) Beta-Galactosidase (E537Q) in Complex With Onpg
  45. 1jyw - E. Coli (Lacz) Beta-Galactosidase (E537Q) in Complex With Pnpg
  46. 1jyx - E. Coli (Lacz) Beta-Galactosidase in Complex With Iptg
  47. 1jyy - E. Coli (Lacz) Beta-Galactosidase in Complex With 2-F- Lactose. Chains A-H, See Remark 400.
  48. 1jyz - E. Coli (Lacz) Beta-Galactosidase in Complex With 2-F- Lactose. Chains I-P, See Remark 400.
  49. 1jz0 - E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl- Enzyme Intermediate. Chains A-H, See Remark 400
  50. 1jz1 - E. Coli (Lacz) Beta-Galactosidase-Trapped 2-F-Galactosyl- Enzyme Intermediate. Chains I-P, See Remark 400


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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