Chemical elements
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    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
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    PDB 3b2n-3bos
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    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 54 (2651-2700), PDB files 3l88 - 3max

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 2651-2700 (3l88 - 3max):
  1. 3l88 - Crystal Structure of the Human Adenovirus Type 21 Fiber Knob
  2. 3l8g - Crystal Structure of D,D-Heptose 1.7-Bisphosphate Phosphatase From E. Coli Complexed With D-Glycero-D-Manno- Heptose 1 ,7-Bisphosphate
  3. 3l8l - Gramicidin D Complex With Sodium Iodide
  4. 3l8m - Crystal Structure of A Probable Thiamine Pyrophosphokinase From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Consortium Target Id SYR86
  5. 3l8w - Urate Oxidase From Aspergillus Flavus Complexed With Xanthin
  6. 3l9a - Structure of the C-Terminal Domain From A Streptococcus Mutans Hypothetical
  7. 3l9g - Urate Oxidase Complexed With Uric Acid and Chloride
  8. 3la1 - High Resolution Crystal Structure of Cypet Mutant A167I
  9. 3lab - Crystal Structure of A Putative Kdpg (2-Keto-3-Deoxy-6- Phosphogluconate) Aldolase From Oleispira Antarctica
  10. 3lbg - Urate Oxidase Complexed With 8-Thio Xanthine
  11. 3ld4 - Urate Oxidase Complexed With 8-Nitro Xanthine
  12. 3lde - High Resolution Open Mthk Pore Structure Crystallized In 100 Mm K+ and Further Soaked in 100 Mm Na+.
  13. 3lg1 - Structure of the Thioalkalivibrio Nitratireducens Cytochrome C Nitrite Reductase Reduced By Sodium Borohydride (in Complex With Sulfite)
  14. 3lhc - Crystal Structure of Cyanovirin-N Swapping Domain B Mutant
  15. 3ljq - Crystal Structure of the Glycosylasparaginase T152C Apo-Precursor
  16. 3ljw - Crystal Structure Of the Second Bromodomain of Human Polybromo
  17. 3lk9 - Dna Polymerase Beta With A Gapped Dna Substrate and Dtmp(CF2)P(CF2)P
  18. 3lkb - Crystal Structure of A Branched Chain Amino Acid Abc Transporter From Thermus Thermophilus With Bound Valine
  19. 3llj - Re-Investigated High Resolution Crystal Structure of Histidine Triad Nucleotide-Binding Protein 1 (HINT1) From Rabbit Complexed With Adenosine
  20. 3lnt - Crystal Structure of Phosphoglyceromutase From Burkholderia Pseudomallei 1710B With Bound Malonic Acid
  21. 3lo8 - Crystal Structure Of the Oxidized Form of Ferredoxin:Nadp+ Reductase From Maize Root At 1.05 Angstroms
  22. 3log - Crystal Structure of Mbti From Mycobacterium Tuberculosis
  23. 3lp5 - The Crystal Structure of the Putative Cell Surface Hydrolase From Lactobacillus Plantarum WCFS1
  24. 3lp9 - Crystal Structure of LS24, A Seed Albumin From Lathyrus Sativus
  25. 3lqc - X-Ray Crystal Structure of Oxidized XRCC1 Bound to Dna Pol Beta Palm Thumb Domain
  26. 3lrf - Crystal Structure of Beta-Ketoacyl Synthase From Brucella Melitensis
  27. 3lrk - Structure of Alfa-Galactosidase (MEL1) From Saccharomyces Cerevisiae
  28. 3lrl - Structure of Alfa-Galactosidase (MEL1) From Saccharomyces Cerevisiae With Melibiose
  29. 3lsq - Trypanosoma Brucei Seryl-Trna Synthetase
  30. 3lss - Trypanosoma Brucei Seryl-Trna Synthetase in Complex With Atp
  31. 3lsu - Crystal Structure of SOD2 From Saccharomyces Cerevisiae
  32. 3lu1 - Crystal Structure Analysis of Wbgu: A Udp-Galnac 4-Epimerase
  33. 3lu9 - Crystal Structure Of Human Thrombin Mutant S195A in Complex With the Extracellular Fragment of Human PAR1
  34. 3lwd - Crystal Structure of Putative 6-Phosphogluconolactonase (YP_574786.1) From Chromohalobacter Salexigens Dsm 3043 At 1.88 A Resolution
  35. 3lwl - Structure Of Klenow Fragment of Taq Polymerase in Complex With An Abasic Site
  36. 3lwm - Structure Of the Large Fragment of Thermus Aquaticus Dna Polymerase I in Complex With A Blunt-Ended Dna and Ddatp
  37. 3lzw - Crystal Structure of Ferredoxin-Nadp+ Oxidoreductase From Bacillus Subtilis (Form I)
  38. 3lzx - Crystal Structure of Ferredoxin-Nadp+ Oxidoreductase From Bacillus Subtilis (Form II)
  39. 3m1a - The Crystal Structure of A Short-Chain Dehydrogenase From Streptomyces Avermitilis to 2A
  40. 3m3m - Crystal Structure of Glutathione S-Transferase From Pseudomonas Fluorescens [Pf-5]
  41. 3m3u - Effect of Temperature on Tryptophan Fluorescence in Lysozyme Crystals
  42. 3m48 - GCN4 Leucine Zipper Peptide Mutant
  43. 3m5p - Glucose-6-Phosphate Isomerase From Francisella Tularensis Complexed With Fructose-6-Phosphate.
  44. 3m7k - Crystal Structure of Paci-Dna Enzyme Product Complex
  45. 3m8a - Crystal Structure of Swine Flu Virus NS1 N-Terminal Rna Binding Domain From H1N1 Influenza A/California/07/2009
  46. 3m92 - The Structure of Ycin, An Unchracterized Protein From Shigella Flexneri.
  47. 3ma9 - Crystal Structure of GP41 Derived Protein Complexed With Fab 8066
  48. 3mao - Crystal Structure of Human Methionine-R-Sulfoxide Reductase B1 (MSRB1)
  49. 3mat - E.Coli Methionine Aminopeptidase Transition-State Inhibitor Complex
  50. 3max - Crystal Structure of Human HDAC2 Complexed With An N-(2-Aminophenyl) Benzamide


We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from
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