Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
      3hww
      3hwx
      3hx0
      3hya
      3hyi
      3hyj
      3hys
      3hzn
      3hzo
      3i01
      3i04
      3i0w
      3i0x
      3i1j
      3i24
      3i2w
      3i31
      3i3b
      3i3c
      3i3d
      3i3e
      3i44
      3i4q
      3i55
      3i56
      3i6e
      3i6o
      3i6v
      3i78
      3i8t
      3ian
      3iap
      3iaq
      3iax
      3ic3
      3ic9
      3icf
      3ife
      3ifv
      3ifz
      3igq
      3igr
      3igy
      3igz
      3ih5
      3ihr
      3ihv
      3ij6
      3ijm
      3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 51 (2501-2550), PDB files 3hww - 3ijp






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 2501-2550 (3hww - 3ijp):
  1. 3hww - Crystal Structure of Menaquinone Synthesis Protein Mend From E. Coli in Complex With Oxoglutarate
  2. 3hwx - Crystal Structure of Menaquinone Synthesis Protein Mend From E. Coli in Complex With Thdp
  3. 3hx0 - Ternary Complex of L277A, H511A, R514 Mutant Pol Lambda Bound to A 2 Nucleotide Gapped Dna Substrate With A Scrunched Da
  4. 3hya - Hyaluronic Acid, Molecular Conformations and Interactions in Two Sodium Salts
  5. 3hyi - Crystal Structure of Full-Length DUF199/Whia From Thermatoga Maritima
  6. 3hyj - Crystal Structure Of the N-Terminal Laglidadg Domain of DUF199/Whia
  7. 3hys - Structure of RV0554 From Mycobacterium Tuberculosis Complexed With Malonic Acid
  8. 3hzn - Structure of the Salmonella Typhimurium Nfnb Dihydropteridine Reductase
  9. 3hzo - RV0554 From Mycobacterium Tuberculosis - The Structure Solved From the Tetragonal Crystal Form
  10. 3i01 - Native Structure of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl- Coa Synthase From Moorella Thermoacetica, Water-Bound C-Cluster.
  11. 3i04 - Cyanide-Bound Structure of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase From Moorella Thermoacetica, Cyanide-Bound C-Cluster
  12. 3i0w - Crystal Structure of Clostridium Acetobutylicum 8-Oxoguanine Glycosylase/Lyase in Complex With Dsdna Containing Cytosine Opposite to 8-Oxog
  13. 3i0x - Crystal Structure of Clostridium Acetobutylicum 8-Oxoguanine Glycosylase/Lyase in Complex With Dsdna Containing Adenine Opposite to 8-Oxog
  14. 3i1j - Structure of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae
  15. 3i24 - Crystal Structure of A Hit Family Hydrolase Protein From Vibrio Fischeri. Northeast Structural Genomics Consortium Target Id VFR176
  16. 3i2w - Crystal Structure Of Efc/F-Bar Domain of Drosophila Syndapin/Pacsin
  17. 3i31 - Hera Helicase Rna Binding Domain Is An Rrm Fold
  18. 3i3b - E.Coli (Lacz) Beta-Galactosidase (M542A) in Complex With D- Galactopyranosyl-1-on
  19. 3i3c - Crystal Structural of CBX5 Chromo Shadow Domain
  20. 3i3d - E. Coli (Lacz) Beta-Galactosidase (M542A) in Complex With Iptg
  21. 3i3e - E. Coli (Lacz) Beta-Galactosidase (M542A)
  22. 3i44 - Crystal Structure of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0A Resolution
  23. 3i4q - Structure of A Putative Inorganic Pyrophosphatase From the Oil-Degrading Bacterium Oleispira Antarctica
  24. 3i55 - Co-Crystal Structure of Mycalamide A Bound to the Large Ribosomal Subunit
  25. 3i56 - Co-Crystal Structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit
  26. 3i6e - Crystal Structure of Muconate Lactonizing Enzyme From Ruegeria Pomeroyi.
  27. 3i6o - Crystal Structure of Wild Type Hiv-1 Protease With Macrocyclic Inhibitor Grl-0216A
  28. 3i6v - Crystal Structure of A Periplasmic His/Glu/Gln/Arg/Opine Family- Binding Protein From Silicibacter Pomeroyi in Complex With Lysine
  29. 3i78 - 35/99/170/186/220-Loops of Fxa in Sgt
  30. 3i8t - N-Terminal CRD1 Domain of Mouse Galectin-4 in Complex With Lactose
  31. 3ian - Crystal Structure of A Chitinase From Lactococcus Lactis Subsp. Lactis
  32. 3iap - E. Coli (Lacz) Beta-Galactosidase (E416Q)
  33. 3iaq - E. Coli (Lacz) Beta-Galactosidase (E416V)
  34. 3iax - The Crystal Structure Of The Tolb Box Of Colicin A In Complex With Tolb Reveals Important Differences in The Recruitment of the Common Tolb Translocation Portal Used By Group A Colicins
  35. 3ic3 - Structure of A Putative Pyruvate Dehydrogenase From the Photosynthetic Bacterium Rhodopseudomonas Palustrus CGA009
  36. 3ic9 - The Structure of Dihydrolipoamide Dehydrogenase From Colwellia Psychrerythraea 34H.
  37. 3icf - Structure of Protein Serine/Threonine Phosphatase From Saccharomyces Cerevisiae With Similarity to Human Phosphatase PP5
  38. 3ife - 1.55 Angstrom Resolution Crystal Structure of Peptidase T (Pept-1) From Bacillus Anthracis Str. 'Ames Ancestor'.
  39. 3ifv - Crystal Structure of the Haloferax Volcanii Proliferating Cell Nuclear Antigen
  40. 3ifz - Crystal Structure Of The First Part of The Mycobacterium Tuberculosis Dna Gyrase Reaction Core: the Breakage and Reunion Domain At 2.7 A Resolution
  41. 3igq - Crystal Structure Of the Extracellular Domain of A Bacterial Pentameric Ligand-Gated Ion Channel
  42. 3igr - The Crystal Structure of Ribosomal-Protein-S5-Alanine Acetyltransferase From Vibrio Fischeri to 2.0A
  43. 3igy - Crystal Structures of Leishmania Mexicana Phosphoglycerate Mutase At High Cobalt Concentrations
  44. 3igz - Crystal Structures of Leishmania Mexicana Phosphoglycerate Mutase At Low Cobalt Concentration
  45. 3ih5 - Crystal Structure of Electron Transfer Flavoprotein Alpha- Subunit From Bacteroides Thetaiotaomicron
  46. 3ihr - Crystal Structure of UCH37
  47. 3ihv - Crystal Structure of Susd Homolog (NP_813570.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 1.70 A Resolution
  48. 3ij6 - Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Lactobacillus Acidophilus
  49. 3ijm - The Structure of A Restriction Endonuclease-Like Fold Superfamily Protein From Spirosoma Linguale.
  50. 3ijp - Crystal Structure of Dihydrodipicolinate Reductase From Bartonella Henselae At 2.0A Resolution


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
© Copyright 2008-2012 by atomistry.com