Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
      3gyz
      3gz5
      3gz6
      3gza
      3gzh
      3h09
      3h0n
      3h0u
      3h12
      3h1v
      3h2z
      3h42
      3h4z
      3h5b
      3h5i
      3h7c
      3h7k
      3h7m
      3h84
      3h8j
      3hab
      3hac
      3hb7
      3hbz
      3hc9
      3hh3
      3hh5
      3hhq
      3hij
      3hiu
      3hjb
      3hjz
      3hk7
      3hkv
      3hlj
      3hlt
      3hpt
      3hsc
      3hss
      3htl
      3hup
      3hvi
      3hvu
      3hvy
      3hw8
      3hwd
      3hwe
      3hwf
      3hwg
      3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 50 (2451-2500), PDB files 3gyz - 3hwt






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 2451-2500 (3gyz - 3hwt):
  1. 3gyz - Crystal Structure of Ipgc From Shigella Flexneri
  2. 3gz5 - Crystal Structure of Shewanella Oneidensis Nrtr
  3. 3gz6 - Crystal Structure of Shewanella Oneidensis Nrtr Complexed With A 27MER Dna
  4. 3gza - Crystal Structure of Putative Alpha-L-Fucosidase (NP_812709.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 1.60 A Resolution
  5. 3gzh - Crystal Structure of Phosphate-Bound Adenylosuccinate Lyase From E. Coli
  6. 3h09 - The Structure of Haemophilus Influenzae IGA1 Protease
  7. 3h0n - Crystal Structure of A DUF1470 Family Protein (JANN_2411) From Jannaschia Sp. CCS1 At 1.45 A Resolution
  8. 3h0u - Crystal Structure of A Putative Enoyl-Coa Hydratase From Streptomyces Avermitilis
  9. 3h12 - Crystal Structure of Putative Mandelate Racemase From Bordetella Bronchiseptica RB50
  10. 3h1v - Human Glucokinase in Complex With A Synthetic Activator
  11. 3h2z - The Crystal Structure of Mannitol-1-Phosphate Dehydrogenase From Shigella Flexneri
  12. 3h42 - Crystal Structure of PCSK9 in Complex With Fab From Ldlr Competitive Antibody
  13. 3h4z - Crystal Structure of An Mbp-Der P 7 Fusion Protein
  14. 3h5b - Crystal Structure of Wild Type Hiv-1 Protease With Novel P1'-Ligand Grl-02031
  15. 3h5i - Crystal Structure Of the N-Terminal Domain of A Response Regulator/Sensory Box/Ggdef 3-Domain Protein From Carboxydothermus Hydrogenoformans
  16. 3h7c - Crystal Structure of Arabidopsis Thaliana Agmatine Deiminase From Cell Free Expression
  17. 3h7k - Crystal Structure of Arabidopsis Thaliana Agmatine Deiminase Complexed With A Covalently Bound Reaction Intermediate
  18. 3h7m - Crystal Structure of A Histidine Kinase Sensor Domain With Similarity to Periplasmic Binding Proteins
  19. 3h84 - Crystal Structure of GET3
  20. 3h8j - Native T4 Rnase H in the Absence of Divalent Metal Ions
  21. 3hab - The Structure of DPP4 in Complex With Piperidine Fused Benzimidazole 25
  22. 3hac - The Structure of Dpp-4 in Complex With Piperidine Fused Imidazopyridine 34
  23. 3hb7 - The Crystal Structure of An Isochorismatase-Like Hydrolase From Alkaliphilus Metalliredigens to 2.3A
  24. 3hbz - Crystal Structure of A Putative Glycoside Hydrolase (BT_2081) From Bacteroides Thetaiotaomicron Vpi-5482 At 2.05 A Resolution
  25. 3hc9 - Ferric Horse Heart Myoglobin; H64V Mutant
  26. 3hh3 - New Azaborine Compounds Bind to the T4 Lysozyme L99A Cavity - 1,2-Dihydro-1,2-Azaborine
  27. 3hh5 - New Azaborine Compounds Bind to the T4 Lysozyme L99A Cavity - 1-Ethyl-2-Hydro-1,2-Azaborine
  28. 3hhq - Crystal Structure of Apo DUT1P From Saccharomyces Cerevisiae
  29. 3hij - Crystal Structure of Dihydrodipicolinate Synthase From Bacillus Anthracis in Complex With Its Substrate, Pyruvate
  30. 3hiu - The Crystal Structure of Protein (XCC3681) From Xanthomonas Campestris Pv. Campestris Str. Atcc 33913
  31. 3hjb - 1.5 Angstrom Crystal Structure of Glucose-6-Phosphate Isomerase From Vibrio Cholerae.
  32. 3hjz - The Structure of An Aldolase From Prochlorococcus Marinus
  33. 3hk7 - Crystal Structure of Uronate Isomerase From Bacillus Halodurans Complexed With Zinc and D-Arabinarate, Monoclinic Crystal Form
  34. 3hkv - Human Poly(Adp-Ribose) Polymerase 10, Catalytic Fragment in Complex With An Inhibitor 3-Aminobenzamide
  35. 3hlj - Crystal Structure of Human Carbonic Anhydrase Isozyme II With 3- Methylthiobenzimidazo[1,2-C][1,2,3]Thiadiazol-7-Sulfonamide
  36. 3hlt - The Crystal Structure of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 2 (HDHD2)
  37. 3hpt - Crystal Structure of Human Fxa in Complex With (S)-2-Cyano-1-(2- Methylbenzofuran-5-Yl)-3-(2-Oxo-1-(2-Oxo-2-(Pyrrolidin-1-Yl)Ethyl) Azepan-3-Yl)Guanidine
  38. 3hsc - Three-Dimensional Structure Of the Atpase Fragment of A 70K Heat-Shock Cognate Protein
  39. 3hss - A Higher Resolution Structure of RV0554 From Mycobacterium Tuberculosis Complexed With Malonic Acid
  40. 3htl - Structure of the Corynebacterium Diphtheriae Major Pilin Spaa Points to A Modular Pilus Assembly With Stabilizing Isopeptide Bonds
  41. 3hup - High-Resolution Structure Of the Extracellular Domain of Human CD69
  42. 3hvi - Rat Catechol O-Methyltransferase in Complex With A Bisubstrate Inhibitor
  43. 3hvu - 1.95 Angstrom Crystal Structure Of Complex of Hypoxanthine-Guanine Phosphoribosyltransferase From Bacillus Anthracis With 2-(N- Morpholino)Ethanesulfonic Acid (Mes)
  44. 3hvy - Crystal Structure of Putative Cystathionine Beta-Lyase Involved in Aluminum Resistance (NP_348457.1) From Clostridium Acetobutylicum At 2.00 A Resolution
  45. 3hw8 - Ternary Complex Of Dna Polymerase Lambda of A Two Nucleotide Gapped Dna Substrate With A C in the Scrunch Site
  46. 3hwd - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) K125A-K134A Mutant Complexed With Ferric Enterobactin
  47. 3hwe - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed With Fe-Bishacam
  48. 3hwf - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed With Fe-TRENCAM2-Hopo
  49. 3hwg - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed With Fe-Trencam-HOPO2
  50. 3hwt - Ternary Complex of Dna Polymerase Lambda Bound to A Two Nucleotide Gapped Dna Substrate With A Scrunched Da


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
© Copyright 2008-2012 by atomistry.com