Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
      3g3s
      3g4s
      3g6e
      3g6n
      3g71
      3g7m
      3g7r
      3g8q
      3ga5
      3ga6
      3gbv
      3gc2
      3gc8
      3gc9
      3gcd
      3gdg
      3gdx
      3ged
      3geg
      3geo
      3geu
      3gii
      3gir
      3gjc
      3gjd
      3gjl
      3gjx
      3gl5
      3gnk
      3gns
      3goa
      3god
      3gox
      3gp4
      3gq9
      3grd
      3gsd
      3gsh
      3gsj
      3gtd
      3gti
      3gud
      3gvf
      3gvk
      3gwo
      3gwq
      3gwu
      3gwv
      3gww
      3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 49 (2401-2450), PDB files 3g3s - 3gxw






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 2401-2450 (3g3s - 3gxw):
  1. 3g3s - Crystal Structure of GCN5-Related N-Acetyltransferase-Like Protein (ZP_00874857) (ZP_00874857.1) From Streptococcus Suis 89/1591 At 1.80 A Resolution
  2. 3g4s - Co-Crystal Structure of Tiamulin Bound to the Large Ribosomal Subunit
  3. 3g6e - Co-Crystal Structure of Homoharringtonine Bound to the Large Ribosomal Subunit
  4. 3g6n - Crystal Structure of An Efpdf Complex With Met-Ala-Ser
  5. 3g71 - Co-Crystal Structure of Bruceantin Bound to the Large Ribosomal Subunit
  6. 3g7m - Structure of the Thaumatin-Like Xylanase Inhibitor Tlxi
  7. 3g7r - Crystal Structure of SCO4454, A Tetr-Family Transcriptional Regulator From Streptomyces Coelicolor
  8. 3g8q - A Cytidine Deaminase Edits C-to-U In Transfer Rnas in Archaea
  9. 3ga5 - X-Ray Structure of Glucose/Galactose Receptor From Salmonella Typhimurium in Complex With (2R)-Glyceryl-Beta- D-Galactopyranoside
  10. 3ga6 - MTH0212 in Complex With Two Dna Helices
  11. 3gbv - Crystal Structure of A Putative Laci Transcriptional Regulator From Bacteroides Fragilis
  12. 3gc2 - 1.85 Angstrom Crystal Structure of O-Succinylbenzoate Synthase From Salmonella Typhimurium in Complex With Succinic Acid
  13. 3gc8 - The Structure of P38BETA C162S in Complex With A Dihydroquinazolinone
  14. 3gc9 - The Structure of P38BETA C119S, C162S in Complex With A Dihydroquinazolinone Inhibitor
  15. 3gcd - Structure of the V. Cholerae Rtx Cysteine Protease Domain in Complex With An Aza-Leucine Peptide Inhibitor
  16. 3gdg - Crystal Structure of the Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum.
  17. 3gdx - Dna Polymerase Beta With A Gapped Dnd Substrate and Dtmp(CF2)Pp
  18. 3ged - Fingerprint and Structural Analysis of A Apo Scor Enzyme From Clostridium Thermocellum
  19. 3geg - Fingerprint and Structural Analysis of A Scor Enzyme With Its Bound Cofactor From Clostridium Thermocellum
  20. 3geo - Sulfite Reductase Hemoprotein Nitrite Complex
  21. 3geu - Crystal Structure Of Icar From Staphylococcus Aureus, A Member of the Tetracycline Repressor Protein Family
  22. 3gii - DPO4 Extension Ternary Complex With Disordered A Opposite An Oxog in Anti Conformation
  23. 3gir - Crystal Structure of Glycine Cleavage System Aminomethyltransferase T From Bartonella Henselae
  24. 3gjc - Crystal Structure Of the E290S Mutant of Leut With Bound Og
  25. 3gjd - Crystal Structure of Leut With Bound Og
  26. 3gjl - Crystal Structure of A Dna Duplex Containing 7,8- Dihydropyridol[2,3-D]Pyrimidin-2-One
  27. 3gjx - Crystal Structure of the Nuclear Export Complex CRM1- SNURPORTIN1-Rangtp
  28. 3gl5 - Crystal Structure of Probable Dsba Oxidoreductase SCO1869 From Streptomyces Coelicolor
  29. 3gnk - Calcium Bound to the Holliday Junction Sequence D(Tcggcgccga)4
  30. 3gns - Crystal Structure of the Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule in Au)
  31. 3goa - Crystal Structure of the Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase
  32. 3god - Structural Basis For Dnase Activity of A Conserved Protein Implicated in Crispr-Mediated Antiviral Defense
  33. 3gox - Crystal Structure Of The Beta-Beta-Alpha-Me Type II Restriction Endonuclease HPY99I in the Absence of Edta
  34. 3gp4 - Crystal Structure of Putative Merr Family Transcriptional Regulator From Listeria Monocytogenes
  35. 3gq9 - Crystal Structure of the Bacteriophage PHI29 Gene Product 12 N-Terminal Fragment in An Apo Form
  36. 3grd - Crystal Structure of NTF2-Superfamily Protein With Unknown Function (NP_977240.1) From Bacillus Cereus Atcc 10987 At 1.25 A Resolution
  37. 3gsd - 2.05 Angstrom Structure of A Divalent-Cation Tolerance Protein (Cuta) From Yersinia Pestis
  38. 3gsh - Three-Dimensional Structure of A Post Translational Modified Barley LTP1
  39. 3gsj - A Bulky Rhodium Complex Bound to An Adenosine-Adenosine Dna Mismatch
  40. 3gtd - 2.4 Angstrom Crystal Structure of Fumarate Hydratase From Rickettsia Prowazekii
  41. 3gti - D71G/E101G/M234L Mutant in Organophosphorus Hydrolase From Deinococcus Radiodurans
  42. 3gud - Crystal Structure of A Novel Intramolecular Chaperon
  43. 3gvf - 1.7 Angstrom Crystal Structure of Inorganic Pyrophosphatase From Burkholderia Pseudomallei Bound With Phosphate
  44. 3gvk - Crystal Structure of Endo-Neuraminidase Nf Mutant
  45. 3gwo - Structure Of the C-Terminal Domain of A Putative Hiv-1 GP41 Fusion Intermediate
  46. 3gwq - Crystal Structure of A Putative D-Serine Deaminase (BXE_A4060) From Burkholderia Xenovorans LB400 At 2.00 A Resolution
  47. 3gwu - Leucine Transporter Leut in Complex With Sertraline
  48. 3gwv - Leucine Transporter Leut in Complex With R-Fluoxetine
  49. 3gww - Leucine Transporter Leut in Complex With S-Fluoxetine
  50. 3gxw - Structure Of The SH2 Domain of the Candida Glabrata Transcription Elongation Factor SPT6, Crystal Form A


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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