Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
      3euw
      3evi
      3exc
      3exm
      3exx
      3ezq
      3f0i
      3f2m
      3f3a
      3f3c
      3f3d
      3f3e
      3f47
      3f48
      3f49
      3f4f
      3f4i
      3f4j
      3f5h
      3f5m
      3f66
      3f68
      3f6u
      3f72
      3f7c
      3f7k
      3f7l
      3f83
      3f8v
      3f93
      3f94
      3f9l
      3fak
      3fbx
      3fc3
      3fci
      3fct
      3fd6
      3fdb
      3fde
      3fdj
      3few
      3ff1
      3ffc
      3ffz
      3fg0
      3fgh
      3fgr
      3fgt
      3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 47 (2301-2350), PDB files 3euw - 3fgw






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 2301-2350 (3euw - 3fgw):
  1. 3euw - Crystal Structure of A Myo-Inositol Dehydrogenase From Corynebacterium Glutamicum Atcc 13032
  2. 3evi - Crystal Structure Of the Thioredoxin-Fold Domain of Human Phosducin- Like Protein 2
  3. 3exc - Structure of the Rna'Se SSO8090 From Sulfolobus Solfataricus
  4. 3exm - Crystal Structure of The Phosphatase SC4828 With the Non-Hydrolyzable Nucleotide Gpcp
  5. 3exx - Structure of the T6 Human Insulin Derivative With Nickel At 1.35 A Resolution
  6. 3ezq - Crystal Structure of the Fas/Fadd Death Domain Complex
  7. 3f0i - Arsenate Reductase From Vibrio Cholerae.
  8. 3f2m - Urate Oxidase Complexed With 8-Azaxanthine At 150 Mpa
  9. 3f3a - Crystal Structure of Leut Bound to L-Tryptophan and Sodium
  10. 3f3c - Crystal Structure of Leut Bound to 4-Fluoro-L-Phenylalanine and Sodium
  11. 3f3d - Crystal Structure of Leut Bound to L-Methionine and Sodium
  12. 3f3e - Crystal Structure of Leut Bound to L-Leucine (30 Mm) and Sodium
  13. 3f47 - The Crystal Structure of [Fe]-Hydrogenase (Hmd) Holoenzyme From Methanocaldococcus Jannaschii
  14. 3f48 - Crystal Structure of Leut Bound to L-Alanine and Sodium
  15. 3f49 - Anion-Triggered Engineered Subtilisin SUBT_BACAM
  16. 3f4f - Crystal Structure of DUT1P, A Dutpase From Saccharomyces Cerevisiae
  17. 3f4i - Crystal Structure of Leut Bound to L-Selenomethionine and Sodium
  18. 3f4j - Crystal Structure of Leut Bound to Glycine and Sodium
  19. 3f5h - Crystal Structure Of Fused Docking Domains From Pikaiii and Pikaiv of the Pikromycin Polyketide Synthase
  20. 3f5m - Crystal Structure of Atp-Bound Phosphofructokinase From Trypanosoma Brucei
  21. 3f66 - Human C-Met Kinase in Complex With Quinoxaline Inhibitor
  22. 3f68 - Thrombin Inhibition
  23. 3f6u - Crystal Structure of Human Activated Protein C (Apc) Complexed With Ppack
  24. 3f72 - Crystal Structure of the Staphylococcus Aureus PI258 Cadc Metal Binding Site 2 Mutant
  25. 3f7c - Crystal Structure of A DUF416 Family Protein (MAQU_0942) From Marinobacter Aquaeolei VT8 At 2.00 A Resolution
  26. 3f7k - X-Ray Crystal Structure of An Alvinella Pompejana Cu,Zn Superoxide Dismutase- Hydrogen Peroxide Complex
  27. 3f7l - X-Ray Crystal Structure of Alvinella Pompejana Cu,Zn Superoxide Dismutase
  28. 3f83 - Structure Of Fusion Complex Of the Minor Pilin Cfae and Major Pilin Cfab of Cfa/I Pili From Etec E. Coli
  29. 3f8v - Evaulaution At Atomic Resolution Of The Role of Strain in Destabilizing the Temperature Sensitive T4 Lysozyme Mutant ARG96-->His
  30. 3f93 - Crystal Structure of Exo-1,3/1,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. BB1
  31. 3f94 - Crystal Structure of Truncated Exo-1,3/1,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. BB1
  32. 3f9l - Evaulaution At Atomic Resolution Of The Role of Strain in Destabilizing the Temperature Sensitive T4 Lysozyme Mutant ARG96-->His
  33. 3fak - Structural and Functional Analysis of A Hormone-Sensitive Lipase Like ESTE5 From A Metagenome Library
  34. 3fbx - Crystal Structure of the Lysosomal 66.3 Kda Protein From Mouse Solved By S-Sad
  35. 3fc3 - Crystal Structure of the Beta-Beta-Alpha-Me Type II Restriction Endonuclease HPY99I
  36. 3fci - Complex of UNG2 and A Fragment-Based Designed Inhibitor
  37. 3fct - Mature Metal Chelatase Catalytic Antibody With Hapten
  38. 3fd6 - Crystal Structure of Human Selenophosphate Synthetase 1 Complex With Adp and Phosphate
  39. 3fdb - Crystal Structure of A Putative Plp-Dependent Beta-Cystathionase (Aecd, DIP1736) From Corynebacterium Diphtheriae At 1.99 A Resolution
  40. 3fde - Mouse UHRF1 Sra Domain Bound With Hemi-Methylated Cpg Dna, Crystal Structure in Space Group C222(1) At 1.4 A Resolution
  41. 3fdj - The Structure of A Degv Family Protein From Eubacterium Eligens.
  42. 3few - Structure and Function of Colicin S4, A Colicin With A Duplicated Receptor Binding Domain
  43. 3ff1 - Structure of Glucose 6-Phosphate Isomerase From Staphylococcus Aureus
  44. 3ffc - Crystal Structure of CF34 Tcr in Complex With Hla-B8/Flr
  45. 3ffz - Domain Organization In Clostridium Butulinum Neurotoxin Type E Is Unique: Its Implication in Faster Translocation
  46. 3fg0 - 1.85 Angstrom Resolution Crystal Structure of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus (IDP00699) in Complex With Nad+
  47. 3fgh - Human Mitochondrial Transcription Factor A Box B
  48. 3fgr - Two Chain Form of the 66.3 Kda Protein At 1.8 Angstroem
  49. 3fgt - Two Chain Form of The 66.3 Kda Protein From Mouse Lacking the Linker Peptide
  50. 3fgw - One Chain Form of the 66.3 Kda Protein


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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