Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
      3ccs
      3ccu
      3ccv
      3cd6
      3cgl
      3ci3
      3cki
      3cks
      3cku
      3clo
      3cma
      3cmb
      3cmd
      3cme
      3cmj
      3cmp
      3cng
      3cnh
      3cpe
      3cpw
      3cq8
      3cqb
      3cqx
      3crn
      3crp
      3csv
      3ctp
      3ctz
      3cx3
      3cx4
      3cxc
      3cyj
      3cym
      3cyx
      3czj
      3d0p
      3d1i
      3d1y
      3d20
      3d32
      3d49
      3d4l
      3d54
      3d5k
      3d5t
      3d6a
      3d76
      3d77
      3d7j
      3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 44 (2151-2200), PDB files 3ccs - 3d7r






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 2151-2200 (3ccs - 3d7r):
  1. 3ccs - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation G2482A
  2. 3ccu - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation G2482C
  3. 3ccv - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation G2616A
  4. 3cd6 - Co-Cystal of Large Ribosomal Subunit Mutant G2616A With Cc-Puromycin
  5. 3cgl - Crystal Structure and Raman Studies of DSFP483, A Cyan Fluorescent Protein From Discosoma Striata
  6. 3ci3 - Structure of the Pduo-Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri Complexed With Partial Adenosylcobalamin and Pppi
  7. 3cki - Crystal Structure of the Tace-N-Timp-3 Complex
  8. 3cks - Urate Oxidase Complexed With 8-Azaxanthine Under 4.0 Mpa Oxygen Pressure
  9. 3cku - Urate Oxidase From Aspergillus Flavus Complexed With Its Inhibitor 8-Azaxanthin and Chloride
  10. 3clo - Crystal Structure of Putative Transcriptional Regulator Containing A Luxr Dna Binding Domain (NP_811094.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 2.04 A Resolution
  11. 3cma - The Structure Of Cca and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  12. 3cmb - Crystal Structure of Acetoacetate Decarboxylase (YP_001047042.1) From Methanoculleus Marisnigri JR1 At 1.60 A Resolution
  13. 3cmd - Crystal Structure of Peptide Deformylase From Vre-E.Faecium
  14. 3cme - The Structure Of Ca and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  15. 3cmj - Crystal Structure of Engineered Beta-Glucosidase From Soil Metagenome
  16. 3cmp - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) K125A Mutant Complexed With Ferric Enterobactin
  17. 3cng - Crystal Structure of Nudix Hydrolase From Nitrosomonas Europaea
  18. 3cnh - Crystal Structure Of Predicted Hydrolase of Haloacid Dehalogenase-Like Superfamily (NP_295428.1) From Deinococcus Radiodurans At 1.66 A Resolution
  19. 3cpe - Crystal Structure of T4 GP17
  20. 3cpw - The Structure Of The Antibiotic Linezolid Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
  21. 3cq8 - Ternary Complex of the L415F Mutant RB69 Exo(-)Polymerase
  22. 3cqb - Crystal Structure of Heat Shock Protein Htpx Domain From Vibrio Parahaemolyticus Rimd 2210633
  23. 3cqx - Chaperone Complex
  24. 3crn - Crystal Structure of Response Regulator Receiver Domain Protein (Chey- Like) From Methanospirillum Hungatei Jf-1
  25. 3crp - A Heterospecific Leucine Zipper Tetramer
  26. 3csv - Crystal Structure of A Putative Aminoglycoside Phosphotransferase (YP_614837.1) From Silicibacter Sp. TM1040 At 2.15 A Resolution
  27. 3ctp - Crystal Structure of Periplasmic Binding Protein/Laci Transcriptional Regulator From Alkaliphilus Metalliredigens Qymf Complexed With D- Xylulofuranose
  28. 3ctz - Structure of Human Cytosolic X-Prolyl Aminopeptidase
  29. 3cx3 - Crystal Structure Analysis of the Streptococcus Pneumoniae Adcaii Protein
  30. 3cx4 - Crystal Structure of E.Coli Gs Mutant E377A in Complex With Adp and Oligosaccharides
  31. 3cxc - The Structure Of An Enhanced Oxazolidinone Inhibitor Bound to the 50S Ribosomal Subunit of H. Marismortui
  32. 3cyj - Crystal Structure of A Mandelate Racemase/Muconate Lactonizing Enzyme- Like Protein From Rubrobacter Xylanophilus
  33. 3cym - Crystal Structure of Protein BAD_0989 From Bifidobacterium Adolescentis
  34. 3cyx - Crystal Structure of Hiv-1 Mutant I50V and Inhibitor Saquinavira
  35. 3czj - "E. Coli (Lacz) Beta-Galactosidase (N460T) in Complex With D- Galctopyranosyl-1-One"
  36. 3d0p - Insights Into Rna/Dna Hybrid Recognition and Processing By Rnase H From the Crystal Structure of A Non-Specific Enzyme-Dsdna Complex
  37. 3d1i - Structure of the Thioalkalivibrio Nitratireducens Cytochrome C Nitrite Reductase in A Complex With Nitrite
  38. 3d1y - Crystal Structure of Hiv-1 Mutant I54V and Inhibitor Saquina
  39. 3d20 - Crystal Structure of Hiv-1 Mutant I54V and Inhibitor Darunavia
  40. 3d32 - Complex of Gaba(A) Receptor-Associated Protein (Gabarap) With A Synthetic Peptide
  41. 3d49 - Thrombin Inhibition
  42. 3d4l - Human Dipeptidyl Peptidase IV/CD26 in Complex With A Novel Inhibitor
  43. 3d54 - Stucture of Purlqs From Thermotoga Maritima
  44. 3d5k - Crystal Structure of the Oprm Channel in A Non-Symmetrical Space Group
  45. 3d5t - Crystal Structure of Malate Dehydrogenase From Burkholderia Pseudomallei
  46. 3d6a - Crystal Structure Of the 2H-Phosphatase Domain of Sts-2 in Complex With Tungstate.
  47. 3d76 - Crystal Structure of A Pheromone Binding Protein Mutant D35N, From Apis Mellifera, Soaked At pH 7.0
  48. 3d77 - Crystal Structure of A Pheromone Binding Protein Mutant D35N, From Apis Mellifera, Soaked At pH 4.0
  49. 3d7j - SCO6650, A 6-Pyruvoyltetrahydropterin Synthase Homolog From Streptomyces Coelicolor
  50. 3d7r - Crystal Structure of A Putative Esterase From Staphylococcus Aureus


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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