Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
      2v3h
      2v3o
      2v3u
      2v4b
      2v4v
      2v5c
      2v5h
      2v5i
      2v5y
      2v6f
      2v6g
      2v6k
      2v6u
      2v79
      2v8c
      2v8f
      2v9v
      2vbt
      2vcf
      2vdx
      2vgd
      2vj3
      2vjm
      2vjp
      2vkf
      2vkg
      2vla
      2vn8
      2vnf
      2vnu
      2vnx
      2vnz
      2vo2
      2vpb
      2vqr
      2vrp
      2vrr
      2vt4
      2vu1
      2vv6
      2vv7
      2vv8
      2vvc
      2vvu
      2vvv
      2vwk
      2vwl
      2vwm
      2vwn
      2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 35 (1701-1750), PDB files 2v3h - 2vwo






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 1701-1750 (2v3h - 2vwo):
  1. 2v3h - Thrombin With 3-Cycle No F
  2. 2v3o - Thrombin With 3-Cycle With F
  3. 2v3u - Structure Of The Ligand-Binding Core of the Ionotropic Glutamate Receptor-Like GLURDELTA2 in Complex With D- Serine
  4. 2v4b - Crystal Structure of Human Adamts-1 Catalytic Domain and Cysteine-Rich Domain (Apo-Form)
  5. 2v4v - Crystal Structure of A Family 6 Carbohydrate-Binding Module From Clostridium Cellulolyticum in Complex With Xylose
  6. 2v5c - Family 84 Glycoside Hydrolase From Clostridium Perfringens, 2.1 Angstrom Structure
  7. 2v5h - Controlling The Storage Of Nitrogen As Arginine: the Complex of Pii and Acetylglutamate Kinase From Synechococcus Elongatus Pcc 7942
  8. 2v5i - Structure Of the Receptor-Binding Protein of Bacteriophage DET7: A Podoviral Tailspike in A Myovirus
  9. 2v5y - Crystal Structure of the Receptor Protein Tyrosine Phosphatase Mu Ectodomain
  10. 2v6f - Structure of Progesterone 5BETA-Reductase From Digitalis Lanata
  11. 2v6g - Structure of Progesterone 5BETA-Reductase From Digitalis Lanata in Complex With Nadp
  12. 2v6k - Structure of Maleyl Pyruvate Isomerase, A Bacterial Glutathione-S-Transferase In Zeta Class, in Complex With Substrate Analogue Dicarboxyethyl Glutathione
  13. 2v6u - High Resolution Crystal Structure of Pterin-4A- Carbinolamine Dehydratase From Toxoplasma Gondii
  14. 2v79 - Crystal Structure Of the N-Terminal Domain of Dnad From Bacillus Subtilis
  15. 2v8c - Mouse Profilin Iia in Complex With the Proline-Rich Domain of Vasp
  16. 2v8f - Mouse Profilin Iia in Complex With A Double Repeat From the FH1 Domain of MDIA1
  17. 2v9v - Crystal Structure of Moorella Thermoacetica Selb(377-511)
  18. 2vbt - Riboflavin Kinase MJ0056 From Methanocaldococcus Jannaschii in Complex With Cdp and PO4
  19. 2vcf - Structure of Isoniazid (Inh) Bound to Cytosolic Soybean Ascorbate Peroxidase
  20. 2vdx - Crystal Structure of the Reactive Loop Cleaved Corticosteroid Binding Globulin
  21. 2vgd - Crystal Structure of Environmental Isolated GH11 in Complex With Xylobiose and Feruloyl-Arabino-Xylotriose
  22. 2vj3 - Human Notch-1 Egfs 11-13
  23. 2vjm - Formyl-Coa Transferase With Aspartyl-Formyl Anhydide Intermediate
  24. 2vjp - Formyl-Coa Transferase Mutant Variant W48F
  25. 2vkf - Complexes of Dodecin With Flavin and Flavin-Like Ligands
  26. 2vkg - Complexes of Dodecin With Flavin and Flavin-Like Ligands
  27. 2vla - Crystal Structure of Restriction Endonuclease Bpuji Recognition Domain in Complex With Cognate Dna
  28. 2vn8 - Crystal Structure of Human Reticulon 4 Interacting Protein 1 in Complex With Nadph
  29. 2vnf - Molecular Basis of Histone H3K4ME3 Recognition By ING4
  30. 2vnu - Crystal Structure of Sc RRP44
  31. 2vnx - Crystal Structure Of Soybean Ascorbate Peroxidase Mutant W41A After Exposure to A High Dose of X-Rays
  32. 2vnz - Crystal Structure of Dithinonite Reduced Soybean Ascorbate Peroxidase Mutant W41A.
  33. 2vo2 - Crystal Structure of Soybean Ascorbate Peroxidase Mutant W41A Subjected to Low Dose X-Rays
  34. 2vpb - Decoding of Methylated Histone H3 Tail By the Pygo-BCL9 Wnt Signaling Complex
  35. 2vqr - Crystal Structure Of A Phosphonate Monoester Hydrolase From Rhizobium Leguminosarum: A New Member of the Alkaline Phosphatase Superfamily
  36. 2vrp - Structure of Rhodocytin
  37. 2vrr - Structure of Sumo Modified UBC9
  38. 2vt4 - Turkey BETA1 Adrenergic Receptor With Stabilising Mutations and Bound Cyanopindolol
  39. 2vu1 - Biosynthetic Thiolase From Z. Ramigera. Complex of With O- Pantheteine-11-Pivalate.
  40. 2vv6 - Bjfixlh in Ferric Form
  41. 2vv7 - Bjfixlh in Unliganded Ferrous Form
  42. 2vv8 - Co-Bound Structure of Bjfixlh
  43. 2vvc - Aminopyrrolidine Factor Xa Inhibitor
  44. 2vvu - Aminopyrrolidine Factor Xa Inhibitor
  45. 2vvv - Aminopyrrolidine-Related Triazole Factor Xa Inhibitor
  46. 2vwk - Uracil Recognition in Archaeal Dna Polymerases Captured By X-Ray Crystallography. V93Q Polymerase Variant
  47. 2vwl - Aminopyrrolidine Factor Xa Inhibitor
  48. 2vwm - Aminopyrrolidine Factor Xa Inhibitor
  49. 2vwn - Aminopyrrolidine Factor Xa Inhibitor
  50. 2vwo - Aminopyrrolidine Factor Xa Inhibitor


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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