Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
      2qzi
      2r0w
      2r1s
      2r20
      2r21
      2r22
      2r25
      2r35
      2r36
      2r37
      2r5o
      2r5p
      2r84
      2r85
      2r86
      2ra9
      2rdh
      2rdp
      2ret
      2rg8
      2rgi
      2rh9
      2rhg
      2rhj
      2rht
      2rhw
      2ri0
      2ri6
      2rk7
      2rk8
      2rka
      2rkd
      2rke
      2rtb
      2thf
      2trs
      2tsy
      2tys
      2udp
      2uuf
      2uuj
      2uuk
      2uvm
      2uw1
      2ux9
      2uyz
      2uzz
      2v1q
      2v21
      2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 34 (1651-1700), PDB files 2qzi - 2v35






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 1651-1700 (2qzi - 2v35):
  1. 2qzi - The Crystal Structure Of A Conserved Protein of Unknown Function From Streptococcus Thermophilus Lmg 18311.
  2. 2r0w - PFA2 Fab Complexed With ABETA1-8
  3. 2r1s - Structure of the Rna Brominated Tridecamer R(Gcguu- 5BUGAAACGC) At 1.4 A (BR1)
  4. 2r20 - Structure of the Rna Brominated Tridecamer R(Gcguu- 5BUGAAACGC) At 1.3 A (BR2)
  5. 2r21 - Structure of the Rna Brominated Tridecamer R(Gcguu- 5BUGAAACGC) At 1.6 A (Brmn)
  6. 2r22 - Structure of the Native Rna Tridecamer R(Gcguuugaaacgc) At 1.5 A (Natmn)
  7. 2r25 - Complex of YPD1 And SLN1-R1 With Bound MG2+ and BEF3-
  8. 2r35 - Crystal Structure of Rb Human Arg-Insulin
  9. 2r36 - Crystal Structure of Ni Human Arg-Insulin
  10. 2r37 - Crystal Structure of Human Glutathione Peroxidase 3 (Selenocysteine to Glycine Mutant)
  11. 2r5o - Crystal Structure Of the C-Terminal Domain of Wzt
  12. 2r5p - Crystal Structure Analysis of Hiv-1 Subtype C Protease Complexed With Indinavir
  13. 2r84 - Crystal Structure of Purp From Pyrococcus Furiosus Complexed With Amp and Aicar
  14. 2r85 - Crystal Structure of Purp From Pyrococcus Furiosus Complexed With Amp
  15. 2r86 - Crystal Structure of Purp From Pyrococcus Furiosus Complexed With Atp
  16. 2ra9 - Crystal Structure of A DUF1285 Family Protein (SBAL_2486) From Shewanella Baltica OS155 At 1.40 A Resolution
  17. 2rdh - Crystal Structure of Staphylococcal Superantigen-Like Protein 11
  18. 2rdp - The Structure of A Marr Family Protein From Bacillus Stearothermophilus
  19. 2ret - The Crystal Structure Of A Binary Complex Of Two Pseudopilins: Epsi and Epsj From the Type 2 Secretion System of Vibrio Vulnificus
  20. 2rg8 - Crystal Structure of Programmed For Cell Death 4 Middle MA3 Domain
  21. 2rgi - Crystal Structure of CA2+-Free S100A2 At 1.6 A Resolution
  22. 2rh9 - Tryptophan Synthase Complexed With Igp, Internal Aldimine, pH 9.0
  23. 2rhg - Tryptophan Synthase Complexed With Igp, pH 7.0, Internal Aldimine
  24. 2rhj - Synthetic Gene Encoded Bacillus Subtilis Ftsz With Two Sulfate Ions and Sodium Ion in the Nucleotide Pocket
  25. 2rht - Crystal Structure Of the S112A Mutant of A C-C Hydrolase, Bphd From Burkholderia Xenovorans LB400, in Complex With 3-Cl Hopda
  26. 2rhw - Crystal Structure Of the S112A Mutant of A C-C Hydrolase, Bphd From Burkholderia Xenovorans LB400, in Complex With 3,10-Di-Fluoro Hopda
  27. 2ri0 - Crystal Structure of Glucosamine 6-Phosphate Deaminase (Nagb) From S. Mutans
  28. 2ri6 - Crystal Structure Of S112A Mutant of A C-C Hydrolase, Bphd From Burkholderia Xenovorans LB400
  29. 2rk7 - The Structure of Rat Cytosolic Pepck in Complex With Oxalate
  30. 2rk8 - The Structure of Rat Cytosolic Pepck in Complex With Phosphonoformate
  31. 2rka - The Structure of Rat Cytosolic Pepck in Complex With Phosphoglycolate
  32. 2rkd - The Structure of Rat Cytosolic Pepck in Complex With 3- Phosphonopropionate
  33. 2rke - The Structure of Rat Cytosolic Pepck in Complex With Sulfoacetate.
  34. 2rtb - Apostreptavidin, pH 3.32, Space Group I222
  35. 2thf - Structure of Human Alpha-Thrombin Y225F Mutant Bound to D-Phe-Pro-Arg- Chloromethylketone
  36. 2trs - Crystal Structures Of Mutant (BETAK87T) Tryptophan Synthase ALPHA2 BETA2 Complex With Ligands Bound to The Active Sites of the Alpha and Beta Subunits Reveal Ligand-Induced Conformational Changes
  37. 2tsy - Crystal Structures Of Mutant (BETAK87T) Tryptophan Synthase ALPHA2 BETA2 Complex With Ligands Bound to The Active Sites of the Alpha and Beta Subunits Reveal Ligand-Induced Conformational Changes
  38. 2tys - Crystal Structures Of Mutant (BETAK87T) Tryptophan Synthase ALPHA2 BETA2 Complex With Ligands Bound to The Active Sites of the Alpha and Beta Subunits Reveal Ligand-Induced Conformational Changes
  39. 2udp - Udp-Galactose 4-Epimerase Complexed With Udp-Phenol
  40. 2uuf - Thrombin-Hirugen Binary Complex At 1.26A Resolution
  41. 2uuj - Thrombin-Hirugen-GW473178 Ternary Complex At 1.32A Resolution
  42. 2uuk - Thrombin-Hirugen-GW420128 Ternary Complex At 1.39A Resolution
  43. 2uvm - Structure of Pkbalpha pH Domain in Complex With A Novel Inositol Headgroup Surrogate, Benzene 1,2,3,4- Tetrakisphosphate
  44. 2uw1 - Ivy Desaturase Structure
  45. 2ux9 - Crystal Structure of the T. Thermophilus Dodecin R65A Mutant
  46. 2uyz - Non-Covalent Complex Between UBC9 and SUMO1
  47. 2uzz - X-Ray Structure of N-Methyl-L-Tryptophan Oxidase (Mtox)
  48. 2v1q - Atomic-Resolution Structure of the Yeast SLA1 SH3 Domain 3
  49. 2v21 - Crystal Structure of the T. Thermophilus Dodecin in Complex With Prebound Fmn
  50. 2v35 - Porcine Pancreatic Elastase in Complex With Inhibitor JM54


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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