Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
      2q69
      2q6a
      2q6e
      2q6h
      2q72
      2q8x
      2q92
      2q93
      2q94
      2q95
      2q96
      2qa0
      2qa4
      2qb4
      2qci
      2qd6
      2qd8
      2qei
      2qew
      2qex
      2qey
      2qf1
      2qf2
      2qfp
      2qhf
      2qju
      2qjy
      2qk9
      2qkf
      2qm2
      2qmw
      2qnw
      2qoe
      2qqu
      2qqv
      2qr7
      2qr8
      2qsv
      2qt9
      2qtb
      2qv6
      2qw1
      2qwl
      2qwm
      2qwn
      2qwo
      2qwp
      2qxf
      2qz2
      2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 33 (1601-1650), PDB files 2q69 - 2qz7






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 1601-1650 (2q69 - 2qz7):
  1. 2q69 - Crystal Structure of Nak Channel D66N Mutant
  2. 2q6a - Crystal Structure of Nak Channel D66E Mutant
  3. 2q6e - Crystal Structure of Glucuronate Isomerase From Bacillus Halodurans Complexed With Zn
  4. 2q6h - Crystal Structure Analysis of Leut Complexed With L-Leucine, Sodium, and Clomipramine
  5. 2q72 - Crystal Structure Analysis of Leut Complexed With L-Leucine, Sodium, and Imipramine
  6. 2q8x - The High-Resolution Crystal Structure of IXT6, A Thermophilic, Intracellular Xylanase From G. Stearothermophilus
  7. 2q92 - E. Coli Methionine Aminopeptidase Mn-Form With Inhibitor B23
  8. 2q93 - E. Coli Methionine Aminopeptidase Mn-Form With Inhibitor B21
  9. 2q94 - E. Coli Methionine Aminopeptidase Mn-Form With Inhibitor A04
  10. 2q95 - E. Coli Methionine Aminopeptidase Mn-Form With Inhibitor A05
  11. 2q96 - E. Coli Methionine Aminopeptidase Mn-Form With Inhibitor A18
  12. 2qa0 - Structure of Adeno-Associated Virus Serotype 8
  13. 2qa4 - A More Complete Structure Of The The L7/L12 Stalk of the Haloarcula Marismortui 50S Large Ribosomal Subunit
  14. 2qb4 - Crystal Structure Analysis of Leut Complexed With L-Leucine, Sodium and Desipramine
  15. 2qci - Hiv-1 Protease Mutant D30N With Potent Antiviral Inhibitor Grl-98065
  16. 2qd6 - Hiv-1 Protease Mutant I50V With Potent Antiviral Inhibitor Grl-98065
  17. 2qd8 - Hiv-1 Protease Mutant I84V With Potent Antiviral Inhibitor Grl-98065
  18. 2qei - Crystal Structure Analysis of Leut Complexed With L-Alanine, Sodium, and Clomipramine
  19. 2qew - Rat Cytosolic Pepck, in Complex With Manganese Ion.
  20. 2qex - Negamycin Binds to The Wall Of The Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit
  21. 2qey - Rat Cytosolic Pepck in Complex With Gtp
  22. 2qf1 - Rat Cytosolic Pepck in Complex With Oxaloacetic Acid.
  23. 2qf2 - Rat Cytosolic Pepck in Complex With Oxaloacetic Acid and Gdp.
  24. 2qfp - Crystal Structure of Red Kidney Bean Purple Acid Phosphatase in Complex With Fluoride
  25. 2qhf - Mycobacterium Tuberculosis Chorismate Synthase in Complex With Nca
  26. 2qju - Crystal Structure of An Nss Homolog With Bound Antidepressant
  27. 2qjy - Crystal Structure of Rhodobacter Sphaeroides Double Mutant With Stigmatellin and UQ2
  28. 2qk9 - Human Rnase H Catalytic Domain Mutant D210N in Complex With 18-Mer Rna/Dna Hybrid
  29. 2qkf - Crystal Structure of 3-Deoxy-D-Manno-Octulosonate 8-Phosphate Synthase (KDO8PS) From Neisseria Meningitidis
  30. 2qm2 - Putative Hopj Type III Effector Protein From Vibrio Parahaemolyticus
  31. 2qmw - The Crystal Structure of the Prephenate Dehydratase (Pdt) From Staphylococcus Aureus Subsp. Aureus MU50
  32. 2qnw - Toxoplasma Gondii Apicoplast-Targeted Acyl Carrier Protein
  33. 2qoe - Human Dipeptidyl Peptidase IV in Complex With A Triazolopiperazine- Based Beta Amino Acid Inhibitor
  34. 2qqu - Crystal Structure of A Cell-Wall Invertase (D239A) From Arabidopsis Thaliana in Complex With Sucrose
  35. 2qqv - Crystal Structure of A Cell-Wall Invertase (E203A) From Arabidopsis Thaliana in Complex With Sucrose
  36. 2qr7 - 2.0A X-Ray Structure Of C-Terminal Kinase Domain of P90 Ribosomal S6 Kinase 2: Se-Met Derivative
  37. 2qr8 - 2.0A X-Ray Structure Of C-Terminal Kinase Domain of P90 Ribosomal S6 Kinase 2 (RSK2)
  38. 2qsv - Crystal Structure Of Protein of Unknown Function From Porphyromonas Gingivalis W83
  39. 2qt9 - Human Dipeptidyl Peptidase IV/CD26 in Complex With A 4-Aryl Cyclohexylalanine Inhibitor
  40. 2qtb - Human Dipeptidyl Peptidase IV/CD26 in Complex With A 4-Aryl Cyclohexylalanine Inhibitor
  41. 2qv6 - Gtp Cyclohydrolase III From M. Jannaschii (MJ0145) Complexed With Gtp and Metal Ions
  42. 2qw1 - Glucose/Galactose Binding Protein Bound to 3-O-Methyl D-Glucose
  43. 2qwl - Crystal Structure of Bovine HSC70 (1-394AA)in the Adp State
  44. 2qwm - Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State
  45. 2qwn - Crystal Structure Of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi State
  46. 2qwo - Crystal Structure Of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-394AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi Form #1
  47. 2qwp - Crystal Structure Of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-394AA)R171C and Bovine Auxilin (810-910AA)D876C in the Adp*Pi Form #2
  48. 2qxf - Product Bound Structure of Exonuclease I At 1.5 Angstrom Resolution
  49. 2qz2 - Crystal Structure of A Glycoside Hydrolase Family 11 Xylanase From Aspergillus Niger in Complex With Xylopentaose
  50. 2qz7 - The Crystal Structure Of A Homologue of Telluride Resistance Protein (Terd), SCO6318 From Streptomyces Coelicolor A3(2)


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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