Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
      2p78
      2p79
      2p7d
      2p7g
      2p7h
      2p7i
      2p7j
      2p8s
      2p98
      2p99
      2p9a
      2p9y
      2p9z
      2pa0
      2pca
      2pcg
      2pch
      2pfl
      2pfn
      2pfo
      2pfp
      2pfq
      2pjp
      2pkc
      2pks
      2plo
      2ply
      2pmh
      2pn5
      2pnk
      2poc
      2pod
      2ppl
      2pqk
      2pr5
      2pu7
      2puh
      2puj
      2put
      2puv
      2pw8
      2pxi
      2pya
      2q0m
      2q16
      2q1h
      2q3l
      2q3x
      2q67
      2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 32 (1551-1600), PDB files 2p78 - 2q68






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 1551-1600 (2p78 - 2q68):
  1. 2p78 - Crystal Structure of TTHB049 From Thermus Thermophilus HB8
  2. 2p79 - Crystal Structure of TTHB049 From Thermus Thermophilus HB8
  3. 2p7d - A Minimal, 'Hinged' Hairpin Ribozyme Construct Solved With Mimics of the Product Strands At 2.25 Angstroms Resolution
  4. 2p7g - X-Ray Structure of Estrogen Related Receptor G in Complex With Bisphenol A.
  5. 2p7h - Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 At 1.85 A Resolution
  6. 2p7i - Crystal Structure of A Sam Dependent Methyl-Transferase Type 12 Family Protein (ECA1738) From Pectobacterium Atrosepticum SCRI1043 At 1.74 A Resolution
  7. 2p7j - Crystal Structure Of the Domain of Putative Sensory Box/Ggdef Family Protein From Vibrio Parahaemolyticus
  8. 2p8s - Human Dipeptidyl Peptidase IV/CD26 in Complex With A Cyclohexalamine Inhibitor
  9. 2p98 - E. Coli Methionine Aminopeptidase Monometalated With Inhibitor YE7
  10. 2p99 - E. Coli Methionine Aminopeptidase Monometalated With Inhibitor YE6
  11. 2p9a - E. Coli Methionine Aminopeptidase Dimetalated With Inhibitor YE6
  12. 2p9y - Crystal Structure of TTHB049 From Thermus Thermophilus HB8
  13. 2p9z - Crystal Structure of TTHB049 From Thermus Thermophilus HB8
  14. 2pa0 - Crystal Structure of TTHB049 From Thermus Thermophilus HB8
  15. 2pca - Crystal Structure of PH0725 From Pyrococcus Horikoshii OT3
  16. 2pcg - Crystal Structure of PH0725 From Pyrococcus Horikoshii OT3
  17. 2pch - Crystal Structure of PH0725 From Pyrococcus Horikoshii OT3
  18. 2pfl - Crystal Structure of Pfl From E.Coli
  19. 2pfn - Na in the Active Site of Dna Polymerase Lambda
  20. 2pfo - Dna Polymerase Lambda in Complex With Dna and Dupnpp
  21. 2pfp - Dna Polymerase Lambda in Complex With Dna and Dctp
  22. 2pfq - Manganese Promotes Catalysis in A Dna Polymerase Lambda-Dna Crystal
  23. 2pjp - Structure Of the Mrna-Binding Domain of Elongation Factor Selb From E.Coli in Complex With Secis Rna
  24. 2pkc - Crystal Structure of Calcium-Free Proteinase K At 1.5 Angstroms Resolution
  25. 2pks - Thrombin in Complex With Inhibitor
  26. 2plo - D-(Gtatacc) Low Temperature (100K)
  27. 2ply - Structure Of the Mrna Binding Fragment of Elongation Factor Selb in Complex With Secis Rna.
  28. 2pmh - Crystal Structure Of THR132ALA of ST1022 From Sulfolobus Tokodaii
  29. 2pn5 - Crystal Structure of TEP1R
  30. 2pnk - Crystal Structure of An Uronate Isomerase (BH0493) From Bacillus Halodurans C-125 At 2.00 A Resolution
  31. 2poc - The Crystal Structure Of Isomerase Domain of Glucosamine-6-Phosphate Synthase From Candida Albicans
  32. 2pod - Crystal Structure Of A Member of Enolase Superfamily From Burkholderia Pseudomallei K96243
  33. 2ppl - Human Pancreatic Lipase-Related Protein 1
  34. 2pqk - X-Ray Crystal Structure of Human Mcl-1 in Complex With Bim BH3
  35. 2pr5 - Structural Basis For Light-Dependent Signaling in the Dimeric Lov Photosensor Ytva (Dark Structure)
  36. 2pu7 - Crystal Structure Of S112A/H265A Double Mutant of A C-C Hydrolase, Bphd, From Burkholderia Xenovorans LB400
  37. 2puh - Crystal Structure Of the S112A Mutant of A C-C Hydrolase, Bphd From Burkholderia Xenovorans LB400, in Complex With Its Substrate Hopda
  38. 2puj - Crystal Structure Of the S112A/H265A Double Mutant of A C-C Hydrolase, Bphd From Burkholderia Xenovorans LB400, in Complex With Its Substrate Hopda
  39. 2put - The Crystal Structure Of Isomerase Domain of Glucosamine-6-Phosphate Synthase From Candida Albicans
  40. 2puv - The Crystal Structure Of Isomerase Domain of Glucosamine-6-Phosphate Synthase From Candida Albicans
  41. 2pw8 - Crystal Structure of Sulfo-Hirudin Complexed to Thrombin
  42. 2pxi - Ternary Complex of Dna Polymerase Beta With A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma- Monofluoromethylene Triphosphate
  43. 2pya - Ultra-High Resolution Structure of P. Abyssi Rubredoxin W4L/R5S/A44S
  44. 2q0m - Tricarbonylmanganese(I)-Lysozyme Complex : A Structurally Characterized Organometallic Protein
  45. 2q16 - Structure of the E. Coli Inosine Triphosphate Pyrophosphatase Rgdb in Complex With Itp
  46. 2q1h - Ancestral Corticoid Receptor in Complex With Aldosterone
  47. 2q3l - Crystal Structure of An Uncharacterized Protein From DUF3478 Family With A Spoiiaa-Like Fold (SHEW_3102) From Shewanella Loihica Pv-4 At 2.25 A Resolution
  48. 2q3x - The RIM1ALPHA C2B Domain
  49. 2q67 - Crystal Structure of Nak Channel D66A Mutant
  50. 2q68 - Crystal Structure of Nak Channel D66A, S70E Double Mutants


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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