Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
      2omg
      2omh
      2oni
      2onj
      2onm
      2onp
      2oo1
      2ooq
      2opg
      2oph
      2opl
      2oq4
      2orf
      2orh
      2osw
      2osx
      2osy
      2ot9
      2otj
      2otl
      2otm
      2ouw
      2ov0
      2ovl
      2owd
      2owg
      2owu
      2oyc
      2oyk
      2oyl
      2oym
      2oyn
      2oz3
      2oz9
      2ozq
      2ozt
      2p0o
      2p1f
      2p1r
      2p2t
      2p2z
      2p3f
      2p3z
      2p66
      2p67
      2p6m
      2p6z
      2p75
      2p76
      2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 31 (1501-1550), PDB files 2omg - 2p77






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 1501-1550 (2omg - 2p77):
  1. 2omg - Structure of Human Insulin Cocrystallized With Protamine and Urea
  2. 2omh - Structure Of Human Insulin Cocrystallized With Arg-12 Peptide in Presence of Urea
  3. 2oni - Catalytic Domain of the Human NEDD4-Like E3 Ligase
  4. 2onj - Structure of the Multidrug Abc Transporter SAV1866 From S. Aureus in Complex With Amp-Pnp
  5. 2onm - Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, ALDH2*2, Complexed With Nad+
  6. 2onp - ARG475GLN Mutant of Human Mitochondrial Aldehyde Dehydrogenase, Complexed With Nad+
  7. 2oo1 - Crystal Structure Of the Bromo Domain 2 of Human Bromodomain Containing Protein 3 (BRD3)
  8. 2ooq - Crystal Structure of the Human Receptor Phosphatase Ptprt
  9. 2opg - The Crystal Structure Of the 10TH Pdz Domain of Mpdz
  10. 2oph - Human Dipeptidyl Peptidase IV in Complex With An Alpha Amino Acid Inhibitor
  11. 2opl - Crystal Structure of An Osmc-Like Protein (GSU2788) From Geobacter Sulfurreducens At 1.50 A Resolution
  12. 2oq4 - Crystal Structure of the Dna Repair Enzyme Endonuclease- VIII (Nei) From E. Coli (E2Q) in Complex With Ap-Site Containing Dna Substrate
  13. 2orf - Directing Macromolecular Conformation Through Halogen Bonds
  14. 2orh - Directing Macromolecular Conformation Through Halogen Bonds
  15. 2osw - Endo-Glycoceramidase II From Rhodococcus Sp.
  16. 2osx - Endo-Glycoceramidase II From Rhodococcus Sp.: Ganglioside GM3 Complex
  17. 2osy - Endo-Glycoceramidase II From Rhodococcus Sp.: Lactosyl- Enzyme Intermediate
  18. 2ot9 - Crystal Structure of Yaeq Protein From Pseudomonas Syringae
  19. 2otj - 13-Deoxytedanolide Bound to the Large Subunit of Haloarcula Marismortui
  20. 2otl - Girodazole Bound to the Large Subunit of Haloarcula Marismortui
  21. 2otm - Crystal Structure of A Putative Endoribonuclease (SO_1960) From Shewanella Oneidensis Mr-1 At 1.85 A Resolution
  22. 2ouw - Crystal Structure of Alkylhydroperoxidase Ahpd Core (YP_425393.1) From Rhodospirillum Rubrum Atcc 11170 At 1.95 A Resolution
  23. 2ov0 - Structure of the Blue Copper Protein Amicyanin to 0.75 A Resolution
  24. 2ovl - Crystal Structure of A Racemase From Streptomyces Coelicolor A3(2)
  25. 2owd - Crystal Structure of TTHB049 From Thermus Thermophilus HB8
  26. 2owg - Crystal Structure of PH0725 From Pyrococcus Horikoshii OT3
  27. 2owu - Crystal Structure of PH0725 From Pyrococcus Horikoshii OT3
  28. 2oyc - Crystal Structure of Human Pyridoxal Phosphate Phosphatase
  29. 2oyk - Endo-Glycoceramidase II From Rhodococcus Sp.: Cellobiose-Like Isofagomine Complex
  30. 2oyl - Endo-Glycoceramidase II From Rhodococcus Sp.: Cellobiose-Like Imidazole Complex
  31. 2oym - Endo-Glycoceramidase II From Rhodococcus Sp.: Five-Membered Iminocyclitol Complex
  32. 2oyn - Crystal Structure of Cdp-Bound Protein MJ0056 From Methanococcus Jannaschii, Pfam DUF120
  33. 2oz3 - Crystal Structure of L-Rhamnonate Dehydratase From Azotobacter Vinelandii
  34. 2oz9 - E. Coli Trp Holorepressor, Orthorhombic Crystal Form
  35. 2ozq - Crystal Structure of Apo-Mup
  36. 2ozt - Crystal Structure of O-Succinylbenzoate Synthase From Thermosynechococcus Elongatus Bp-1
  37. 2p0o - Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis With An Unknown Function
  38. 2p1f - Human Ump Synthase (C-Terminal Domain-Orotidine 5'-Monophosphate Decarboxylase)
  39. 2p1r - Crystal Structure of Salmonella Typhimurium Yegs, A Putative Lipid Kinase Homologous to Eukaryotic Sphingosine and Diacylglycerol Kinases.
  40. 2p2t - Crystal Structure Of Dynein Light Chain LC8 Bound to Residues 123-138 of Intermediate Chain IC74
  41. 2p2z - Crystal Structure of TTHB049 From Thermus Thermophilus HB8
  42. 2p3f - Crystal Structure of the Factor Xa/NAP5 Complex
  43. 2p3z - Crystal Structure of L-Rhamnonate Dehydratase From Salmonella Typhimurium
  44. 2p66 - Human Dna Polymerase Beta Complexed With Tetrahydrofuran (Abasic Site) Containing Dna
  45. 2p67 - Crystal Structure of Lao/Ao Transport System Kinase
  46. 2p6m - Crystal Structure of TTHB049 From Thermus Thermophilus HB8
  47. 2p6z - Enzymatic and Structural Characterisation of Amphinase, A Novel Cytotoxic Ribonuclease From Rana Pipiens Oocytes
  48. 2p75 - Crystal Structure of TTHB049 From Thermus Thermophilus HB8
  49. 2p76 - Crystal Structure of A Glycerophosphodiester Phosphodiesterase From Staphylococcus Aureus
  50. 2p77 - Crystal Structure of TTHB049 From Thermus Thermophilus HB8


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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