Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
      2h9k
      2haz
      2hb3
      2hb6
      2hc2
      2hc9
      2hcj
      2hcm
      2hds
      2hea
      2heb
      2hec
      2hed
      2hee
      2hef
      2heu
      2hha
      2hhg
      2hi0
      2hig
      2hjp
      2hlp
      2hoh
      2hq0
      2hrw
      2hti
      2htx
      2hu1
      2hu3
      2hub
      2huv
      2hwl
      2hya
      2hyd
      2hzg
      2hzl
      2hzy
      2i1n
      2i1q
      2i2r
      2i2s
      2i9f
      2i9g
      2iag
      2iaj
      2iba
      2ic0
      2id4
      2idl
      2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 28 (1351-1400), PDB files 2h9k - 2ien






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 1351-1400 (2h9k - 2ien):
  1. 2h9k - Structure of Hen Egg White Lysozyme Soaked With Ni-Cyclam
  2. 2haz - Crystal Structure Of the First Fibronectin Domain of Human NCAM1
  3. 2hb3 - Wild-Type Hiv-1 Protease in Complex With Potent Inhibitor GRL06579
  4. 2hb6 - Structure of Caenorhabditis Elegans Leucine Aminopeptidase (LAP1)
  5. 2hc2 - Engineered Protein Tyrosine Phosphatase Beta Catalytic Domain
  6. 2hc9 - Structure of Caenorhabditis Elegans Leucine Aminopeptidase-Zinc Complex (LAP1)
  7. 2hcj - "Trypsin-Modified Elongation Factor Tu in Complex With Tetracycline"
  8. 2hcm - Crystal Structure of Mouse Putative Dual Specificity Phosphatase Complexed With Zinc Tungstate, New York Structural Genomics Consortium
  9. 2hds - Ampc Beta-Lactamase in Complex With 4-Methanesulfonylamino Benzoic Acid
  10. 2hea - Contribution Of Water Molecules in The Interior of A Protein to the Conformational Stability
  11. 2heb - Contribution Of Water Molecules in The Interior of A Protein to the Conformational Stability
  12. 2hec - Contribution Of Water Molecules in The Interior of A Protein to the Conformational Stability
  13. 2hed - Contribution Of Water Molecules in The Interior of A Protein to the Conformational Stability
  14. 2hee - Contribution Of Water Molecules in The Interior of A Protein to the Conformational Stability
  15. 2hef - Contribution Of Water Molecules in The Interior of A Protein to the Conformational Stability
  16. 2heu - Atomic Resolution Structure Of Apo-Form of Rafe From Streptococcus Pneumoniae
  17. 2hha - The Structure of DPP4 in Complex With An Oxadiazole Inhibitor
  18. 2hhg - Structure Of Protein of Unknown Function RPA3614, Possible Tyrosine Phosphatase, From Rhodopseudomonas Palustris CGA009
  19. 2hi0 - Crystal Structure of Putative Phosphoglycolate Phosphatase (YP_619066.1) From Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc Baa-365 At 1.51 A Resolution
  20. 2hig - Crystal Structure of Phosphofructokinase Apoenzyme From Trypanosoma Brucei.
  21. 2hjp - Crystal Structure of Phosphonopyruvate Hydrolase Complex With Phosphonopyruvate and Mg++
  22. 2hlp - Crystal Structure Of The E267R Mutant of A Halophilic Malate Dehydrogenase in the Apo Form
  23. 2hoh - Ribonuclease T1 (N9A Mutant) Complexed With 2'Gmp
  24. 2hq0 - Structure of Rafe From Streptococcus Pneumoniae
  25. 2hrw - Crystal Structure of Phosphonopyruvate Hydrolase
  26. 2hti - Crystal Structure of A Flavin-Nucleotide-Binding Protein (BH_0577) From Bacillus Halodurans At 2.50 A Resolution
  27. 2htx - Crystal Structure Analysis of Hen Egg White Lysozyme Crosslinked By Polymerized Glutaraldehyde in Acidic Environment
  28. 2hu1 - Crystal Structure Analysis of Hen Egg White Lyszoyme
  29. 2hu3 - Parent Structure Of Hen Egg White Lysozyme Grown in Acidic pH 4.8. Refinement For Comparison With Crosslinked Molecules of Lysozyme
  30. 2hub - Structure of Hen Egg-White Lysozyme Determined From Crystals Grown in pH 7.5
  31. 2huv - Crystal Structure of PH0725 From Pyrococcus Horikoshii OT3
  32. 2hwl - Crystal Structure of Thrombin in Complex With Fibrinogen Gamma' Peptide
  33. 2hya - Hyaluronic Acid, Molecular Conformations and Interactions in Two Sodium Salts
  34. 2hyd - Multidrug Abc Transporter SAV1866
  35. 2hzg - Crystal Stucture of Predicted Mandelate Racemase From Rhodobacter Sphaeroides
  36. 2hzl - Crystal Structures of A Sodium-Alpha-Keto Acid Binding Subunit From A Trap Transporter in Its Closed Forms
  37. 2hzy - Mouse Fumarylacetoacetate Hydrolase Complexes With A Transition-State Mimic of the Complete Substrate
  38. 2i1n - Crystal Structure Of the 1ST Pdz Domain of Human DLG3
  39. 2i1q - Rada Recombinase in Complex With Calcium
  40. 2i2r - Crystal Structure of the KCHIP1/KV4.3 T1 Complex
  41. 2i2s - Crystal Structure of the Porcine Crw-8 Rotavirus VP8* Carbohydrate- Recognising Domain
  42. 2i9f - Structure of the Equine Arterivirus Nucleocapsid Protein
  43. 2i9g - Dna Polymerase Beta With A Benzo[C]Phenanthrene Diol Epoxide Adducted Guanine Base
  44. 2iag - Crystal Structure of Human Prostacyclin Synthase
  45. 2iaj - Crystal Structure of K103N/Y181C Mutant Hiv-1 Reverse Transcriptase (Rt) in Complex With Atp
  46. 2iba - Urate Oxidase From Aspergillus Flavus Complexed With Its Inhibitor 8- Azaxanthine
  47. 2ic0 - Urate Oxidase Under 2.0 Mpa Pressure of Xenon
  48. 2id4 - The 1.9 A Structure of KEX2 in Complex With An Ac-R-E-R-K-Chloromethyl Ketone Inhibitor.
  49. 2idl - Crystal Structure Of Conserved Protein of Unknown Function From Streptococcus Pneumoniae
  50. 2ien - Crystal Structure Analysis of Hiv-1 Protease With A Potent Non-Peptide Inhibitor (Uic-94017)


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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