Chemical elements
  Sodium
    Isotopes
    Energy
    Preparation
    Applications
    Physical Properties
    Chemical Properties
    PDB 131d-1bli
    PDB 1bph-1d10
    PDB 1d11-1ej2
    PDB 1eja-1gb5
    PDB 1gb6-1goh
    PDB 1gq2-1ikp
    PDB 1ikq-1jz1
    PDB 1jz2-1kvs
    PDB 1kvt-1me8
    PDB 1mg2-1nsz
    PDB 1nta-1oyt
    PDB 1p0s-1qjs
    PDB 1qnj-1s5d
    PDB 1s5e-1tjp
    PDB 1tk6-1uxt
    PDB 1uxu-1vzq
    PDB 1w15-1xc6
    PDB 1xcu-1yf1
    PDB 1ygg-1zko
    PDB 1zkp-2afh
    PDB 2agv-2bhc
      2agv
      2ahr
      2ahs
      2ahy
      2amf
      2anp
      2aoc
      2aoe
      2aof
      2aoh
      2ap1
      2aq2
      2asf
      2au6
      2au7
      2au8
      2au9
      2aut
      2auu
      2b0v
      2b22
      2b2b
      2b2n
      2b2o
      2b2q
      2b2r
      2b2s
      2b7r
      2b7s
      2b8o
      2b8r
      2b8s
      2b9w
      2b9x
      2ba9
      2bb7
      2bbh
      2bcq
      2bcr
      2bcs
      2bcu
      2bcv
      2bdg
      2bdr
      2bdy
      2bem
      2ber
      2bfg
      2bgd
      2bhc
    PDB 2bhp-2cc6
    PDB 2cc7-2dec
    PDB 2deg-2ein
    PDB 2eit-2fjb
    PDB 2fld-2gg8
    PDB 2gg9-2h9j
    PDB 2h9k-2ien
    PDB 2ieo-2jih
    PDB 2jin-2omd
    PDB 2omg-2p77
    PDB 2p78-2q68
    PDB 2q69-2qz7
    PDB 2qzi-2v35
    PDB 2v3h-2vwo
    PDB 2vx4-2wig
    PDB 2wij-2x1z
    PDB 2x20-2xmk
    PDB 2xmm-2zfq
    PDB 2zfr-3a6s
    PDB 3a6t-3b1e
    PDB 3b2n-3bos
    PDB 3bov-3ccr
    PDB 3ccs-3d7r
    PDB 3d97-3e3y
    PDB 3e40-3erp
    PDB 3euw-3fgw
    PDB 3fh4-3g3r
    PDB 3g3s-3gxw
    PDB 3gyz-3hwt
    PDB 3hww-3ijp
    PDB 3imm-3k0g
    PDB 3k13-3l7x
    PDB 3l88-3max
    PDB 3mbb-3mr1
    PDB 3mty-3nu3
    PDB 3nu4-3ot1
    PDB 3ow2-3qwc
    PDB 3qx5-3tfr
    PDB 3tfs-3v6o
    PDB 3v72-4ag2
    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in PDB, part 21 (1001-1050), PDB files 2agv - 2bhc






Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms.
PDB files 1001-1050 (2agv - 2bhc):
  1. 2agv - Crystal Structure of the Sr CA2+-Atpase With Bhq and Tg
  2. 2ahr - Crystal Structures of 1-Pyrroline-5-Carboxylate Reductase From Human Pathogen Streptococcus Pyogenes
  3. 2ahs - Crystal Structure Of the Catalytic Domain of Human Tyrosine Receptor Phosphatase Beta
  4. 2ahy - Na+ Complex of the Nak Channel
  5. 2amf - Crystal Structure of 1-Pyrroline-5-Carboxylate Reductase From Human Pathogen Streptococcus Pyogenes
  6. 2anp - Functional Glutamate 151 to Histidine Mutant of the Aminopeptidase From Aeromonas Proteolytica.
  7. 2aoc - Crystal Structure Analysis of Hiv-1 Protease Mutant I84V With A Substrate Analog P2-Nc
  8. 2aoe - Crystal Structure Analysis of Hiv-1 Protease Mutant V82A With A Substrate Analog Ca-P2
  9. 2aof - Crystal Structure Analysis of Hiv-1 Protease Mutant V82A With A Substrate Analog P1-P6
  10. 2aoh - Crystal Structure Analysis of Hiv-1 Protease Mutant V82A With A Substrate Analog P6-Pr
  11. 2ap1 - Crystal Structure of the Putative Regulatory Protein
  12. 2aq2 - Crystal Structure of T-Cell Receptor V Beta Domain Variant Complexed With Superantigen SEC3 Mutant
  13. 2asf - Crystal Structure of the Conserved Hypothetical Protein RV2074 From Mycobacterium Tuberculosis 1.6 A
  14. 2au6 - Crystal Structure Of Catalytic Intermediate of Inorganic Pyrophosphatase
  15. 2au7 - The R43Q Active Site Variant of E.Coli Inorganic Pyrophosphatase
  16. 2au8 - Catalytic Intermediate Structure of Inorganic Pyrophosphatase
  17. 2au9 - Inorganic Pyrophosphatase Complexed With Substrate
  18. 2aut - Crystal Structure Of LYS154ASN Mutant Of Mature Apha of S. Typhimurium
  19. 2auu - Inorganic Pyrophosphatase Complexed With Magnesium Pyrophosphate and Fluoride
  20. 2b0v - Nudix Hydrolase From Nitrosomonas Europaea.
  21. 2b22 - Antiparallel Four-Stranded Coiled Coil Specified By A 3-3-1 Hydrophobic Heptad Repeat
  22. 2b2b - Structural Distortions in Psoralen Cross-Linked Dna
  23. 2b2n - Structure of Transcription-Repair Coupling Factor
  24. 2b2o - Crystal Structure of Native Catalase-Peroxidase Katg At PH8.0
  25. 2b2q - Crystal Structure of Native Catalase-Peroxidase Katg At PH7.5
  26. 2b2r - Crystal Structure Of An Oxoferryl Species of Catalase- Peroxidase Katg At PH5.6
  27. 2b2s - Crystal Structure Of An Oxoferryl Species of Catalase- Peroxidase Katg At PH7.5
  28. 2b7r - Structure of E378D Mutant Flavocytochrome C3
  29. 2b7s - R381K Mutant of Flavocytochrome C3
  30. 2b8o - Crystal Structure of Glu-Gly-Arg-Chloromethyl Ketone-Factor Viia/Soluble Tissue Factor Complex
  31. 2b8r - Structure of Hiv-1(Lai) Genomic Rna Dis
  32. 2b8s - Structure of Hiv-1(Mal) Genomic Rna Dis
  33. 2b9w - Crystal Structure of Cla-Producing Fatty Acid Isomerase From P. Acnes
  34. 2b9x - Crystal Structure of Cla-Producing Fatty Acid Isomerase From P. Acnes
  35. 2ba9 - Crystal Structure of Cla-Producing Fatty Acid Isomerase From P. Acnes
  36. 2bb7 - Mn Form of E. Coli Methionine Aminopeptidase in Complex With A Quinolinyl Sulfonamide Inhibitor
  37. 2bbh - X-Ray Structure of T.Maritima Cora Soluble Domain
  38. 2bcq - Dna Polymerase Lambda in Complex With A Dna Duplex Containing An Unpaired Dtmp
  39. 2bcr - Dna Polymerase Lambda in Complex With A Dna Duplex Containing An Unpaired Damp
  40. 2bcs - Dna Polymerase Lambda in Complex With A Dna Duplex Containing An Unpaired Dcmp
  41. 2bcu - Dna Polymerase Lambda in Complex With A Dna Duplex Containing An Unpaired Damp and A T:T Mismatch
  42. 2bcv - Dna Polymerase Lambda in Complex With Dttp and A Dna Duplex Containing An Unpaired Dtmp
  43. 2bdg - Human Kallikrein 4 Complex With Nickel and P-Aminobenzamidine
  44. 2bdr - Crystal Structure of the Putative Ureidoglycolate Hydrolase PP4288 From Pseudomonas Putida, Northeast Structural Genomics Target PPR49
  45. 2bdy - Thrombin in Complex With Inhibitor
  46. 2bem - Crystal Structure of the Serratia Marcescens Chitin-Binding Protein CBP21
  47. 2ber - Y370G Active Site Mutant of the Sialidase From Micromonospora Viridifaciens in Complex With Beta-NEU5AC (Sialic Acid).
  48. 2bfg - Crystal Structure of Beta-Xylosidase (Fam GH39) in Complex With Dinitrophenyl-Beta-Xyloside and Covalently Bound Xyloside
  49. 2bgd - Structure-Based Design of Protein Tyrosine Phosphatase-1B Inhibitors
  50. 2bhc - Na Substituted E. Coli Aminopeptidase P


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Sodium coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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